RNA–Protein interactions for RNA: ENST00000550582.2

NR4A1-216, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-216ENST00000550582 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
NR4A1-216ENST00000550582 ABCC9O60706 1549 aa33.39■■■□□ 2.94
NR4A1-216ENST00000550582 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
NR4A1-216ENST00000550582 DNAJC5BQ9UF47 199 aa31.68■■■□□ 2.66
NR4A1-216ENST00000550582 RB1CC1Q8TDY2 1594 aa31.57■■■□□ 2.64
NR4A1-216ENST00000550582 NACADO15069 1562 aa31.26■■■□□ 2.6
NR4A1-216ENST00000550582 DCAF8L2P0C7V8 631 aa31.18■■■□□ 2.58
NR4A1-216ENST00000550582 PABPN1Q86U42 306 aaKnown RBP eCLIP31.09■■■□□ 2.57
NR4A1-216ENST00000550582 UNC13AQ9UPW8 1703 aa30.86■■■□□ 2.53
NR4A1-216ENST00000550582 BICRAQ9NZM4 1560 aa30.7■■■□□ 2.5
NR4A1-216ENST00000550582 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
NR4A1-216ENST00000550582 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
NR4A1-216ENST00000550582 DCAF1Q9Y4B6 1507 aa30.18■■■□□ 2.42
NR4A1-216ENST00000550582 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
NR4A1-216ENST00000550582 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
NR4A1-216ENST00000550582 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
NR4A1-216ENST00000550582 CECR2Q9BXF3 1484 aa30.09■■■□□ 2.41
NR4A1-216ENST00000550582 EIF4G1Q04637 1599 aaKnown RBP29.96■■■□□ 2.39
NR4A1-216ENST00000550582 DNAJC5Q9H3Z4 198 aa29.28■■■□□ 2.28
NR4A1-216ENST00000550582 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
NR4A1-216ENST00000550582 CUX2O14529 1486 aa28.85■■■□□ 2.21
NR4A1-216ENST00000550582 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
NR4A1-216ENST00000550582 ATAD2BQ9ULI0 1458 aa28.77■■■□□ 2.2
NR4A1-216ENST00000550582 SMARCA4P51532 1647 aa28.64■■■□□ 2.18
NR4A1-216ENST00000550582 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
NR4A1-216ENST00000550582 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
NR4A1-216ENST00000550582 NESP48681 1621 aa28.6■■■□□ 2.17
NR4A1-216ENST00000550582 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
NR4A1-216ENST00000550582 BAZ1AQ9NRL2 1556 aaPredicted RBP28.43■■■□□ 2.14
NR4A1-216ENST00000550582 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.13
NR4A1-216ENST00000550582 THOC2Q8NI27 1593 aaKnown RBP28.32■■■□□ 2.12
NR4A1-216ENST00000550582 LAMC3Q9Y6N6 1575 aa28.27■■■□□ 2.12
NR4A1-216ENST00000550582 MROH2BQ7Z745 1585 aa28.25■■■□□ 2.11
NR4A1-216ENST00000550582 KIF21AQ7Z4S6 1674 aa28.18■■■□□ 2.1
NR4A1-216ENST00000550582 PDS5BQ9NTI5 1447 aa28.14■■■□□ 2.1
NR4A1-216ENST00000550582 CADPSQ9ULU8 1353 aa28.01■■■□□ 2.07
NR4A1-216ENST00000550582 MRC2Q9UBG0 1479 aa27.92■■■□□ 2.06
NR4A1-216ENST00000550582 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
NR4A1-216ENST00000550582 WIZO95785 1651 aa27.9■■■□□ 2.06
NR4A1-216ENST00000550582 WDR62O43379 1518 aa27.86■■■□□ 2.05
NR4A1-216ENST00000550582 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
NR4A1-216ENST00000550582 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.02
NR4A1-216ENST00000550582 CFTRP13569 1480 aa27.61■■■□□ 2.01
NR4A1-216ENST00000550582 OSCARQ8IYS5 282 aa27.54■■■□□ 2
NR4A1-216ENST00000550582 RSF1Q96T23 1441 aaPredicted RBP27.54■■■□□ 2
NR4A1-216ENST00000550582 URB2Q14146 1524 aaKnown RBP27.5■■□□□ 1.99
NR4A1-216ENST00000550582 TOP2AP11388 1531 aaKnown RBP27.48■■□□□ 1.99
NR4A1-216ENST00000550582 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
NR4A1-216ENST00000550582 ZNF608Q9ULD9 1512 aaPredicted RBP27.24■■□□□ 1.95
NR4A1-216ENST00000550582 CCDC88BA6NC98 1476 aa27.22■■□□□ 1.95
NR4A1-216ENST00000550582 RIMBP3CA6NJZ7 1639 aa27.19■■□□□ 1.94
NR4A1-216ENST00000550582 RIMBP3BA6NNM3 1639 aa27.19■■□□□ 1.94
NR4A1-216ENST00000550582 RIMBP3Q9UFD9 1639 aa27.19■■□□□ 1.94
NR4A1-216ENST00000550582 IFT140Q96RY7 1462 aa27.19■■□□□ 1.94
NR4A1-216ENST00000550582 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
NR4A1-216ENST00000550582 ARHGEF11O15085 1522 aa27.07■■□□□ 1.92
NR4A1-216ENST00000550582 EIF4G3O43432 1585 aaKnown RBP27.02■■□□□ 1.92
NR4A1-216ENST00000550582 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
NR4A1-216ENST00000550582 DNMBPQ6XZF7 1577 aa26.98■■□□□ 1.91
NR4A1-216ENST00000550582 AQRO60306 1485 aaKnown RBP eCLIP26.96■■□□□ 1.91
NR4A1-216ENST00000550582 CYB5RLQ6IPT4 315 aa26.96■■□□□ 1.91
NR4A1-216ENST00000550582 TARBP1Q13395 1621 aaKnown RBP26.91■■□□□ 1.9
NR4A1-216ENST00000550582 CHD1O14646 1710 aa26.89■■□□□ 1.9
NR4A1-216ENST00000550582 FBLN2P98095 1184 aa26.87■■□□□ 1.89
NR4A1-216ENST00000550582 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
NR4A1-216ENST00000550582 ARAP1Q96P48 1450 aa26.79■■□□□ 1.88
NR4A1-216ENST00000550582 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
NR4A1-216ENST00000550582 TRHP20396 242 aaPredicted RBP26.77■■□□□ 1.88
NR4A1-216ENST00000550582 TDRD9Q8NDG6 1382 aaKnown RBP26.74■■□□□ 1.87
NR4A1-216ENST00000550582 SOGA1O94964 1423 aa26.73■■□□□ 1.87
NR4A1-216ENST00000550582 SNAPC4Q5SXM2 1469 aa26.64■■□□□ 1.86
NR4A1-216ENST00000550582 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
NR4A1-216ENST00000550582 CHMP7Q8WUX9 453 aaPredicted RBP26.59■■□□□ 1.85
NR4A1-216ENST00000550582 CLASP1Q7Z460 1538 aa26.57■■□□□ 1.84
NR4A1-216ENST00000550582 CUX1P39880 1505 aa26.55■■□□□ 1.84
NR4A1-216ENST00000550582 WDR97A6NE52 1622 aa26.54■■□□□ 1.84
NR4A1-216ENST00000550582 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
NR4A1-216ENST00000550582 MAGI1Q96QZ7 1491 aaPredicted RBP26.51■■□□□ 1.83
NR4A1-216ENST00000550582 GRIN2BQ13224 1484 aa26.5■■□□□ 1.83
NR4A1-216ENST00000550582 SYNJ2O15056 1496 aa26.45■■□□□ 1.82
NR4A1-216ENST00000550582 GAPVD1Q14C86 1478 aa26.38■■□□□ 1.81
NR4A1-216ENST00000550582 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
NR4A1-216ENST00000550582 ABCA10Q8WWZ4 1543 aa26.28■■□□□ 1.8
NR4A1-216ENST00000550582 ABCA5Q8WWZ7 1642 aa26.26■■□□□ 1.79
NR4A1-216ENST00000550582 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
NR4A1-216ENST00000550582 ERCC6L2Q5T890 1561 aa26.19■■□□□ 1.78
NR4A1-216ENST00000550582 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
NR4A1-216ENST00000550582 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
NR4A1-216ENST00000550582 WRNQ14191 1432 aaPredicted RBP eCLIP26.12■■□□□ 1.77
NR4A1-216ENST00000550582 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
NR4A1-216ENST00000550582 CEP170Q5SW79 1584 aa26.1■■□□□ 1.77
NR4A1-216ENST00000550582 NUP160Q12769 1436 aa26.08■■□□□ 1.77
NR4A1-216ENST00000550582 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
NR4A1-216ENST00000550582 TOP2BQ02880 1626 aa26.01■■□□□ 1.75
NR4A1-216ENST00000550582 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
NR4A1-216ENST00000550582 SHROOM2Q13796 1616 aa25.99■■□□□ 1.75
NR4A1-216ENST00000550582 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
NR4A1-216ENST00000550582 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.74
NR4A1-216ENST00000550582 JPH4Q96JJ6 628 aa25.86■■□□□ 1.73
NR4A1-216ENST00000550582 KIF13AQ9H1H9 1805 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms