RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 NISCHQ9Y2I1 1504 aa44.12■■■■■ 4.65
TUBA1A-206ENST00000550254 CCDC180Q9P1Z9 1646 aa39.31■■■■□ 3.88
TUBA1A-206ENST00000550254 ABCC9O60706 1549 aa38.64■■■■□ 3.78
TUBA1A-206ENST00000550254 RB1CC1Q8TDY2 1594 aa37.07■■■■□ 3.52
TUBA1A-206ENST00000550254 NACADO15069 1562 aa36.98■■■■□ 3.51
TUBA1A-206ENST00000550254 DCAF8L2P0C7V8 631 aa36.89■■■■□ 3.5
TUBA1A-206ENST00000550254 ZCCHC6Q5VYS8 1495 aaKnown RBP36.71■■■■□ 3.47
TUBA1A-206ENST00000550254 MYO15BQ96JP2 1530 aa36.69■■■■□ 3.46
TUBA1A-206ENST00000550254 DCAF1Q9Y4B6 1507 aa36.48■■■■□ 3.43
TUBA1A-206ENST00000550254 UNC13AQ9UPW8 1703 aa36.33■■■■□ 3.41
TUBA1A-206ENST00000550254 PABPN1Q86U42 306 aaKnown RBP eCLIP36.08■■■■□ 3.37
TUBA1A-206ENST00000550254 BICRAQ9NZM4 1560 aa36.02■■■■□ 3.36
TUBA1A-206ENST00000550254 SCRIBQ14160 1630 aa35.86■■■■□ 3.33
TUBA1A-206ENST00000550254 DNAJC5BQ9UF47 199 aa35.7■■■■□ 3.31
TUBA1A-206ENST00000550254 SHROOM4Q9ULL8 1493 aa35.53■■■■□ 3.28
TUBA1A-206ENST00000550254 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
TUBA1A-206ENST00000550254 CC2D2AQ9P2K1 1620 aa34.96■■■■□ 3.19
TUBA1A-206ENST00000550254 CECR2Q9BXF3 1484 aa34.72■■■■□ 3.15
TUBA1A-206ENST00000550254 SMARCA4P51532 1647 aa34.28■■■■□ 3.08
TUBA1A-206ENST00000550254 BAZ1AQ9NRL2 1556 aaPredicted RBP34.19■■■■□ 3.06
TUBA1A-206ENST00000550254 NCAPD3P42695 1498 aa34.14■■■■□ 3.06
TUBA1A-206ENST00000550254 ATAD2BQ9ULI0 1458 aa34.14■■■■□ 3.06
TUBA1A-206ENST00000550254 SMARCA2P51531 1590 aa34.06■■■■□ 3.04
TUBA1A-206ENST00000550254 MROH2BQ7Z745 1585 aa34.02■■■■□ 3.04
TUBA1A-206ENST00000550254 PEG3Q9GZU2 1588 aa33.95■■■■□ 3.03
TUBA1A-206ENST00000550254 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
TUBA1A-206ENST00000550254 BAZ1BQ9UIG0 1483 aaKnown RBP33.82■■■■□ 3
TUBA1A-206ENST00000550254 WIZO95785 1651 aa33.66■■■□□ 2.98
TUBA1A-206ENST00000550254 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
TUBA1A-206ENST00000550254 NESP48681 1621 aa33.41■■■□□ 2.94
TUBA1A-206ENST00000550254 ERCC6Q03468 1493 aa33.27■■■□□ 2.92
TUBA1A-206ENST00000550254 LAMC3Q9Y6N6 1575 aa33.26■■■□□ 2.92
TUBA1A-206ENST00000550254 TOP2AP11388 1531 aaKnown RBP33.25■■■□□ 2.91
TUBA1A-206ENST00000550254 CADPSQ9ULU8 1353 aa33.11■■■□□ 2.89
TUBA1A-206ENST00000550254 KIF21AQ7Z4S6 1674 aa33.03■■■□□ 2.88
TUBA1A-206ENST00000550254 CUX2O14529 1486 aa33.01■■■□□ 2.88
TUBA1A-206ENST00000550254 PDS5BQ9NTI5 1447 aa33.01■■■□□ 2.87
TUBA1A-206ENST00000550254 THOC2Q8NI27 1593 aaKnown RBP32.95■■■□□ 2.86
TUBA1A-206ENST00000550254 CFTRP13569 1480 aa32.9■■■□□ 2.86
TUBA1A-206ENST00000550254 CCDC88BA6NC98 1476 aa32.87■■■□□ 2.85
TUBA1A-206ENST00000550254 FANCD2Q9BXW9 1451 aa32.74■■■□□ 2.83
TUBA1A-206ENST00000550254 MRC2Q9UBG0 1479 aa32.71■■■□□ 2.83
TUBA1A-206ENST00000550254 CEP164Q9UPV0 1460 aa32.71■■■□□ 2.83
TUBA1A-206ENST00000550254 PRDM2Q13029 1718 aa32.67■■■□□ 2.82
TUBA1A-206ENST00000550254 WDR62O43379 1518 aa32.63■■■□□ 2.81
TUBA1A-206ENST00000550254 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
TUBA1A-206ENST00000550254 URB2Q14146 1524 aaKnown RBP32.46■■■□□ 2.79
TUBA1A-206ENST00000550254 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
TUBA1A-206ENST00000550254 TOPBP1Q92547 1522 aa32.21■■■□□ 2.75
TUBA1A-206ENST00000550254 ABCC8Q09428 1581 aa32.16■■■□□ 2.74
TUBA1A-206ENST00000550254 DNMBPQ6XZF7 1577 aa32.15■■■□□ 2.74
TUBA1A-206ENST00000550254 IFT140Q96RY7 1462 aa32.03■■■□□ 2.72
TUBA1A-206ENST00000550254 ZNF608Q9ULD9 1512 aaPredicted RBP31.95■■■□□ 2.7
TUBA1A-206ENST00000550254 POLA1P09884 1462 aaPredicted RBP31.93■■■□□ 2.7
TUBA1A-206ENST00000550254 CUX1P39880 1505 aa31.91■■■□□ 2.7
TUBA1A-206ENST00000550254 TARBP1Q13395 1621 aaKnown RBP31.91■■■□□ 2.7
TUBA1A-206ENST00000550254 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.68
TUBA1A-206ENST00000550254 RAD54L2Q9Y4B4 1467 aa31.81■■■□□ 2.68
TUBA1A-206ENST00000550254 EIF4G3O43432 1585 aaKnown RBP31.81■■■□□ 2.68
TUBA1A-206ENST00000550254 SOGA1O94964 1423 aa31.78■■■□□ 2.68
TUBA1A-206ENST00000550254 AQRO60306 1485 aaKnown RBP eCLIP31.73■■■□□ 2.67
TUBA1A-206ENST00000550254 TDRD9Q8NDG6 1382 aaKnown RBP31.63■■■□□ 2.65
TUBA1A-206ENST00000550254 WDR97A6NE52 1622 aa31.61■■■□□ 2.65
TUBA1A-206ENST00000550254 BIVM-ERCC5R4GMW8 1640 aa31.6■■■□□ 2.65
TUBA1A-206ENST00000550254 WRNQ14191 1432 aaPredicted RBP eCLIP31.6■■■□□ 2.65
TUBA1A-206ENST00000550254 OSCARQ8IYS5 282 aa31.6■■■□□ 2.65
TUBA1A-206ENST00000550254 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
TUBA1A-206ENST00000550254 SYNJ1O43426 1573 aa31.58■■■□□ 2.65
TUBA1A-206ENST00000550254 ABCA10Q8WWZ4 1543 aa31.49■■■□□ 2.63
TUBA1A-206ENST00000550254 CHD1O14646 1710 aa31.46■■■□□ 2.63
TUBA1A-206ENST00000550254 GRIN2BQ13224 1484 aa31.42■■■□□ 2.62
TUBA1A-206ENST00000550254 SNAPC4Q5SXM2 1469 aa31.42■■■□□ 2.62
TUBA1A-206ENST00000550254 ABCA5Q8WWZ7 1642 aa31.42■■■□□ 2.62
TUBA1A-206ENST00000550254 GAPVD1Q14C86 1478 aa31.4■■■□□ 2.62
TUBA1A-206ENST00000550254 PBRM1Q86U86 1689 aa31.4■■■□□ 2.62
TUBA1A-206ENST00000550254 MAGI1Q96QZ7 1491 aaPredicted RBP31.35■■■□□ 2.61
TUBA1A-206ENST00000550254 FBLN2P98095 1184 aa31.34■■■□□ 2.61
TUBA1A-206ENST00000550254 SYNJ2O15056 1496 aa31.24■■■□□ 2.59
TUBA1A-206ENST00000550254 CHMP7Q8WUX9 453 aaPredicted RBP31.22■■■□□ 2.59
TUBA1A-206ENST00000550254 RIMBP3CA6NJZ7 1639 aa31.17■■■□□ 2.58
TUBA1A-206ENST00000550254 RIMBP3BA6NNM3 1639 aa31.17■■■□□ 2.58
TUBA1A-206ENST00000550254 RIMBP3Q9UFD9 1639 aa31.17■■■□□ 2.58
TUBA1A-206ENST00000550254 ARHGEF11O15085 1522 aa31.12■■■□□ 2.57
TUBA1A-206ENST00000550254 ADAMTS12P58397 1594 aa31.11■■■□□ 2.57
TUBA1A-206ENST00000550254 ERICH3Q5RHP9 1530 aa31.11■■■□□ 2.57
TUBA1A-206ENST00000550254 CLASP1Q7Z460 1538 aa31.1■■■□□ 2.57
TUBA1A-206ENST00000550254 TRIM41Q8WV44 630 aa31.08■■■□□ 2.57
TUBA1A-206ENST00000550254 GRIN2AQ12879 1464 aa31.03■■■□□ 2.56
TUBA1A-206ENST00000550254 FHAD1B1AJZ9 1412 aa31.03■■■□□ 2.56
TUBA1A-206ENST00000550254 KIF27Q86VH2 1401 aa30.94■■■□□ 2.54
TUBA1A-206ENST00000550254 CEP170Q5SW79 1584 aa30.92■■■□□ 2.54
TUBA1A-206ENST00000550254 NUP160Q12769 1436 aa30.9■■■□□ 2.54
TUBA1A-206ENST00000550254 IGF1RP08069 1367 aa30.88■■■□□ 2.53
TUBA1A-206ENST00000550254 ARAP1Q96P48 1450 aa30.87■■■□□ 2.53
TUBA1A-206ENST00000550254 CYB5RLQ6IPT4 315 aa30.83■■■□□ 2.53
TUBA1A-206ENST00000550254 CUL7Q14999 1698 aa30.79■■■□□ 2.52
TUBA1A-206ENST00000550254 SHROOM2Q13796 1616 aa30.73■■■□□ 2.51
TUBA1A-206ENST00000550254 RUSC2Q8N2Y8 1516 aa30.69■■■□□ 2.5
TUBA1A-206ENST00000550254 ERCC6L2Q5T890 1561 aa30.69■■■□□ 2.5
TUBA1A-206ENST00000550254 CARMIL1Q5VZK9 1371 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms