RNA–Protein interactions for RNA: ENST00000550205.1

PXN-216, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-216ENST00000550205 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
PXN-216ENST00000550205 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
PXN-216ENST00000550205 ABCC9O60706 1549 aa22.06■■□□□ 1.12
PXN-216ENST00000550205 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.95
PXN-216ENST00000550205 NACADO15069 1562 aa20.89■□□□□ 0.93
PXN-216ENST00000550205 DNAJC5BQ9UF47 199 aa20.76■□□□□ 0.91
PXN-216ENST00000550205 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.9
PXN-216ENST00000550205 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
PXN-216ENST00000550205 UNC13AQ9UPW8 1703 aa20.51■□□□□ 0.87
PXN-216ENST00000550205 PABPN1Q86U42 306 aaKnown RBP eCLIP20.51■□□□□ 0.87
PXN-216ENST00000550205 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
PXN-216ENST00000550205 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
PXN-216ENST00000550205 DCAF1Q9Y4B6 1507 aa20.34■□□□□ 0.85
PXN-216ENST00000550205 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
PXN-216ENST00000550205 SCRIBQ14160 1630 aa20.04■□□□□ 0.8
PXN-216ENST00000550205 CC2D2AQ9P2K1 1620 aa19.95■□□□□ 0.78
PXN-216ENST00000550205 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
PXN-216ENST00000550205 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
PXN-216ENST00000550205 NCAPD3P42695 1498 aa19.29■□□□□ 0.68
PXN-216ENST00000550205 ATAD2BQ9ULI0 1458 aa19.2■□□□□ 0.66
PXN-216ENST00000550205 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
PXN-216ENST00000550205 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
PXN-216ENST00000550205 HMGXB3Q12766 1538 aa19.14■□□□□ 0.65
PXN-216ENST00000550205 DNAJC5Q9H3Z4 198 aa19.12■□□□□ 0.65
PXN-216ENST00000550205 CUX2O14529 1486 aa19.09■□□□□ 0.65
PXN-216ENST00000550205 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
PXN-216ENST00000550205 ERCC6Q03468 1493 aa19.05■□□□□ 0.64
PXN-216ENST00000550205 PEG3Q9GZU2 1588 aa19.03■□□□□ 0.64
PXN-216ENST00000550205 BAZ1BQ9UIG0 1483 aaKnown RBP18.99■□□□□ 0.63
PXN-216ENST00000550205 NESP48681 1621 aa18.94■□□□□ 0.62
PXN-216ENST00000550205 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
PXN-216ENST00000550205 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
PXN-216ENST00000550205 THOC2Q8NI27 1593 aaKnown RBP18.79■□□□□ 0.6
PXN-216ENST00000550205 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
PXN-216ENST00000550205 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
PXN-216ENST00000550205 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
PXN-216ENST00000550205 WIZO95785 1651 aa18.66■□□□□ 0.58
PXN-216ENST00000550205 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
PXN-216ENST00000550205 WDR62O43379 1518 aa18.54■□□□□ 0.56
PXN-216ENST00000550205 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
PXN-216ENST00000550205 CFTRP13569 1480 aa18.47■□□□□ 0.55
PXN-216ENST00000550205 CEP164Q9UPV0 1460 aa18.47■□□□□ 0.55
PXN-216ENST00000550205 FANCD2Q9BXW9 1451 aa18.45■□□□□ 0.54
PXN-216ENST00000550205 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
PXN-216ENST00000550205 URB2Q14146 1524 aaKnown RBP18.3■□□□□ 0.52
PXN-216ENST00000550205 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
PXN-216ENST00000550205 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
PXN-216ENST00000550205 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
PXN-216ENST00000550205 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
PXN-216ENST00000550205 IFT140Q96RY7 1462 aa18.13■□□□□ 0.49
PXN-216ENST00000550205 TOPBP1Q92547 1522 aa18.1■□□□□ 0.49
PXN-216ENST00000550205 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
PXN-216ENST00000550205 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
PXN-216ENST00000550205 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
PXN-216ENST00000550205 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
PXN-216ENST00000550205 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
PXN-216ENST00000550205 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
PXN-216ENST00000550205 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
PXN-216ENST00000550205 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
PXN-216ENST00000550205 POLA1P09884 1462 aaPredicted RBP17.91■□□□□ 0.46
PXN-216ENST00000550205 AQRO60306 1485 aaKnown RBP eCLIP17.9■□□□□ 0.46
PXN-216ENST00000550205 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
PXN-216ENST00000550205 SOGA1O94964 1423 aa17.82■□□□□ 0.44
PXN-216ENST00000550205 CHD1O14646 1710 aa17.82■□□□□ 0.44
PXN-216ENST00000550205 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
PXN-216ENST00000550205 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
PXN-216ENST00000550205 FGD5Q6ZNL6 1462 aa17.78■□□□□ 0.44
PXN-216ENST00000550205 TDRD9Q8NDG6 1382 aaKnown RBP17.78■□□□□ 0.44
PXN-216ENST00000550205 CUX1P39880 1505 aa17.77■□□□□ 0.43
PXN-216ENST00000550205 FBLN2P98095 1184 aa17.74■□□□□ 0.43
PXN-216ENST00000550205 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
PXN-216ENST00000550205 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
PXN-216ENST00000550205 ARAP1Q96P48 1450 aa17.7■□□□□ 0.42
PXN-216ENST00000550205 MAGI1Q96QZ7 1491 aaPredicted RBP17.7■□□□□ 0.42
PXN-216ENST00000550205 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
PXN-216ENST00000550205 CLASP1Q7Z460 1538 aa17.67■□□□□ 0.42
PXN-216ENST00000550205 SYNJ2O15056 1496 aa17.64■□□□□ 0.41
PXN-216ENST00000550205 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
PXN-216ENST00000550205 SYNJ1O43426 1573 aa17.64■□□□□ 0.41
PXN-216ENST00000550205 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
PXN-216ENST00000550205 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
PXN-216ENST00000550205 PBRM1Q86U86 1689 aa17.58■□□□□ 0.41
PXN-216ENST00000550205 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.41
PXN-216ENST00000550205 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
PXN-216ENST00000550205 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
PXN-216ENST00000550205 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
PXN-216ENST00000550205 TOP2BQ02880 1626 aa17.48■□□□□ 0.39
PXN-216ENST00000550205 BIVM-ERCC5R4GMW8 1640 aa17.48■□□□□ 0.39
PXN-216ENST00000550205 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
PXN-216ENST00000550205 ADAMTS12P58397 1594 aa17.44■□□□□ 0.38
PXN-216ENST00000550205 NUP160Q12769 1436 aa17.42■□□□□ 0.38
PXN-216ENST00000550205 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.38
PXN-216ENST00000550205 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
PXN-216ENST00000550205 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
PXN-216ENST00000550205 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
PXN-216ENST00000550205 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
PXN-216ENST00000550205 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.35
PXN-216ENST00000550205 JPH4Q96JJ6 628 aa17.21■□□□□ 0.35
PXN-216ENST00000550205 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.34
PXN-216ENST00000550205 IGF1RP08069 1367 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms