RNA–Protein interactions for RNA: ENST00000550149.5

RACGAP1-219, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-219ENST00000550149 NISCHQ9Y2I1 1504 aa44.42■■■■■ 4.7
RACGAP1-219ENST00000550149 CCDC180Q9P1Z9 1646 aa39.75■■■■□ 3.95
RACGAP1-219ENST00000550149 ABCC9O60706 1549 aa39.67■■■■□ 3.94
RACGAP1-219ENST00000550149 RB1CC1Q8TDY2 1594 aa37.8■■■■□ 3.64
RACGAP1-219ENST00000550149 NACADO15069 1562 aa37.61■■■■□ 3.61
RACGAP1-219ENST00000550149 DCAF8L2P0C7V8 631 aa37.39■■■■□ 3.58
RACGAP1-219ENST00000550149 DNAJC5BQ9UF47 199 aa37.21■■■■□ 3.55
RACGAP1-219ENST00000550149 MYO15BQ96JP2 1530 aa37.2■■■■□ 3.55
RACGAP1-219ENST00000550149 PABPN1Q86U42 306 aaKnown RBP eCLIP36.99■■■■□ 3.51
RACGAP1-219ENST00000550149 UNC13AQ9UPW8 1703 aa36.85■■■■□ 3.49
RACGAP1-219ENST00000550149 ZCCHC6Q5VYS8 1495 aaKnown RBP36.84■■■■□ 3.49
RACGAP1-219ENST00000550149 DCAF1Q9Y4B6 1507 aa36.74■■■■□ 3.47
RACGAP1-219ENST00000550149 BICRAQ9NZM4 1560 aa36.73■■■■□ 3.47
RACGAP1-219ENST00000550149 SHROOM4Q9ULL8 1493 aa36.3■■■■□ 3.4
RACGAP1-219ENST00000550149 SCRIBQ14160 1630 aa36.19■■■■□ 3.38
RACGAP1-219ENST00000550149 CC2D2AQ9P2K1 1620 aa35.83■■■■□ 3.33
RACGAP1-219ENST00000550149 EIF4G1Q04637 1599 aaKnown RBP35.81■■■■□ 3.32
RACGAP1-219ENST00000550149 CECR2Q9BXF3 1484 aa35.75■■■■□ 3.31
RACGAP1-219ENST00000550149 NCAPD3P42695 1498 aa34.78■■■■□ 3.16
RACGAP1-219ENST00000550149 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
RACGAP1-219ENST00000550149 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
RACGAP1-219ENST00000550149 SMARCA2P51531 1590 aa34.53■■■■□ 3.12
RACGAP1-219ENST00000550149 HMGXB3Q12766 1538 aa34.47■■■■□ 3.11
RACGAP1-219ENST00000550149 BAZ1AQ9NRL2 1556 aaPredicted RBP34.45■■■■□ 3.11
RACGAP1-219ENST00000550149 PEG3Q9GZU2 1588 aa34.31■■■■□ 3.08
RACGAP1-219ENST00000550149 BAZ1BQ9UIG0 1483 aaKnown RBP34.27■■■■□ 3.08
RACGAP1-219ENST00000550149 ERCC6Q03468 1493 aa34.23■■■■□ 3.07
RACGAP1-219ENST00000550149 MROH2BQ7Z745 1585 aa34.21■■■■□ 3.07
RACGAP1-219ENST00000550149 CUX2O14529 1486 aa34.2■■■■□ 3.06
RACGAP1-219ENST00000550149 NESP48681 1621 aa34.12■■■■□ 3.05
RACGAP1-219ENST00000550149 DNAJC5Q9H3Z4 198 aa34.1■■■■□ 3.05
RACGAP1-219ENST00000550149 LAMC3Q9Y6N6 1575 aa33.9■■■■□ 3.02
RACGAP1-219ENST00000550149 WIZO95785 1651 aa33.74■■■□□ 2.99
RACGAP1-219ENST00000550149 PDS5BQ9NTI5 1447 aa33.74■■■□□ 2.99
RACGAP1-219ENST00000550149 THOC2Q8NI27 1593 aaKnown RBP33.73■■■□□ 2.99
RACGAP1-219ENST00000550149 CADPSQ9ULU8 1353 aa33.72■■■□□ 2.99
RACGAP1-219ENST00000550149 KIF21AQ7Z4S6 1674 aa33.59■■■□□ 2.97
RACGAP1-219ENST00000550149 RSF1Q96T23 1441 aaPredicted RBP33.58■■■□□ 2.97
RACGAP1-219ENST00000550149 MRC2Q9UBG0 1479 aa33.42■■■□□ 2.94
RACGAP1-219ENST00000550149 TOP2AP11388 1531 aaKnown RBP33.38■■■□□ 2.93
RACGAP1-219ENST00000550149 CFTRP13569 1480 aa33.35■■■□□ 2.93
RACGAP1-219ENST00000550149 WDR62O43379 1518 aa33.33■■■□□ 2.93
RACGAP1-219ENST00000550149 CEP164Q9UPV0 1460 aa33.29■■■□□ 2.92
RACGAP1-219ENST00000550149 FANCD2Q9BXW9 1451 aa33.28■■■□□ 2.92
RACGAP1-219ENST00000550149 CCDC88BA6NC98 1476 aa33.03■■■□□ 2.88
RACGAP1-219ENST00000550149 URB2Q14146 1524 aaKnown RBP33.01■■■□□ 2.87
RACGAP1-219ENST00000550149 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
RACGAP1-219ENST00000550149 OSCARQ8IYS5 282 aa32.67■■■□□ 2.82
RACGAP1-219ENST00000550149 IFT140Q96RY7 1462 aa32.66■■■□□ 2.82
RACGAP1-219ENST00000550149 TOPBP1Q92547 1522 aa32.66■■■□□ 2.82
RACGAP1-219ENST00000550149 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
RACGAP1-219ENST00000550149 ZNF608Q9ULD9 1512 aaPredicted RBP32.57■■■□□ 2.8
RACGAP1-219ENST00000550149 TRIM41Q8WV44 630 aa32.55■■■□□ 2.8
RACGAP1-219ENST00000550149 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
RACGAP1-219ENST00000550149 TARBP1Q13395 1621 aaKnown RBP32.35■■■□□ 2.77
RACGAP1-219ENST00000550149 POLA1P09884 1462 aaPredicted RBP32.35■■■□□ 2.77
RACGAP1-219ENST00000550149 EIF4G3O43432 1585 aaKnown RBP32.34■■■□□ 2.77
RACGAP1-219ENST00000550149 AQRO60306 1485 aaKnown RBP eCLIP32.3■■■□□ 2.761e-6■■■□□ 14.8
RACGAP1-219ENST00000550149 SOGA1O94964 1423 aa32.21■■■□□ 2.75
RACGAP1-219ENST00000550149 RAD54L2Q9Y4B4 1467 aa32.21■■■□□ 2.75
RACGAP1-219ENST00000550149 RIMBP3CA6NJZ7 1639 aa32.15■■■□□ 2.74
RACGAP1-219ENST00000550149 RIMBP3BA6NNM3 1639 aa32.15■■■□□ 2.74
RACGAP1-219ENST00000550149 RIMBP3Q9UFD9 1639 aa32.15■■■□□ 2.74
RACGAP1-219ENST00000550149 FGD5Q6ZNL6 1462 aa32.14■■■□□ 2.74
RACGAP1-219ENST00000550149 CUX1P39880 1505 aa32.13■■■□□ 2.73
RACGAP1-219ENST00000550149 TDRD9Q8NDG6 1382 aaKnown RBP32.12■■■□□ 2.73
RACGAP1-219ENST00000550149 SUPT5HO00267 1087 aaKnown RBP32.1■■■□□ 2.73
RACGAP1-219ENST00000550149 ARHGEF11O15085 1522 aa32.09■■■□□ 2.73
RACGAP1-219ENST00000550149 WDR97A6NE52 1622 aa32.04■■■□□ 2.72
RACGAP1-219ENST00000550149 FBLN2P98095 1184 aa32.03■■■□□ 2.72
RACGAP1-219ENST00000550149 CHD1O14646 1710 aa32.03■■■□□ 2.72
RACGAP1-219ENST00000550149 SNAPC4Q5SXM2 1469 aa31.96■■■□□ 2.71
RACGAP1-219ENST00000550149 GRIN2BQ13224 1484 aa31.91■■■□□ 2.7
RACGAP1-219ENST00000550149 MAGI1Q96QZ7 1491 aaPredicted RBP31.91■■■□□ 2.7
RACGAP1-219ENST00000550149 CYB5RLQ6IPT4 315 aa31.87■■■□□ 2.69
RACGAP1-219ENST00000550149 CHMP7Q8WUX9 453 aaPredicted RBP31.86■■■□□ 2.69
RACGAP1-219ENST00000550149 ABCA10Q8WWZ4 1543 aa31.81■■■□□ 2.68
RACGAP1-219ENST00000550149 GAPVD1Q14C86 1478 aa31.8■■■□□ 2.68
RACGAP1-219ENST00000550149 ARAP1Q96P48 1450 aa31.8■■■□□ 2.68
RACGAP1-219ENST00000550149 SYNJ2O15056 1496 aa31.79■■■□□ 2.68
RACGAP1-219ENST00000550149 CLASP1Q7Z460 1538 aa31.78■■■□□ 2.68
RACGAP1-219ENST00000550149 SYNJ1O43426 1573 aa31.73■■■□□ 2.67
RACGAP1-219ENST00000550149 WRNQ14191 1432 aaPredicted RBP eCLIP31.71■■■□□ 2.67
RACGAP1-219ENST00000550149 ABCA5Q8WWZ7 1642 aa31.71■■■□□ 2.67
RACGAP1-219ENST00000550149 PBRM1Q86U86 1689 aa31.67■■■□□ 2.66
RACGAP1-219ENST00000550149 TOP2BQ02880 1626 aa31.63■■■□□ 2.65
RACGAP1-219ENST00000550149 BIVM-ERCC5R4GMW8 1640 aa31.6■■■□□ 2.65
RACGAP1-219ENST00000550149 GRIN2AQ12879 1464 aa31.49■■■□□ 2.63
RACGAP1-219ENST00000550149 ADAMTS12P58397 1594 aa31.45■■■□□ 2.63
RACGAP1-219ENST00000550149 TRHP20396 242 aaPredicted RBP31.44■■■□□ 2.62
RACGAP1-219ENST00000550149 FHAD1B1AJZ9 1412 aa31.42■■■□□ 2.62
RACGAP1-219ENST00000550149 NUP160Q12769 1436 aa31.42■■■□□ 2.62
RACGAP1-219ENST00000550149 ERICH3Q5RHP9 1530 aa31.4■■■□□ 2.62
RACGAP1-219ENST00000550149 CEP170Q5SW79 1584 aa31.35■■■□□ 2.61
RACGAP1-219ENST00000550149 ERCC6L2Q5T890 1561 aa31.26■■■□□ 2.6
RACGAP1-219ENST00000550149 SHROOM2Q13796 1616 aa31.21■■■□□ 2.59
RACGAP1-219ENST00000550149 JPH4Q96JJ6 628 aa31.1■■■□□ 2.57
RACGAP1-219ENST00000550149 IGF1RP08069 1367 aa31.08■■■□□ 2.57
RACGAP1-219ENST00000550149 PRG4Q92954 1404 aaPredicted RBP31.07■■■□□ 2.57
RACGAP1-219ENST00000550149 KIF27Q86VH2 1401 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms