RNA–Protein interactions for RNA: ENST00000550141.1

ITGA5-206, Transcript of integrin subunit alpha 5, humanhuman

TSL 3

Gene ITGA5, Length 582 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-206ENST00000550141 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
ITGA5-206ENST00000550141 CCDC180Q9P1Z9 1646 aa28.01■■■□□ 2.07
ITGA5-206ENST00000550141 ABCC9O60706 1549 aa27.87■■■□□ 2.05
ITGA5-206ENST00000550141 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
ITGA5-206ENST00000550141 NACADO15069 1562 aa26.46■■□□□ 1.83
ITGA5-206ENST00000550141 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
ITGA5-206ENST00000550141 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.77
ITGA5-206ENST00000550141 DNAJC5BQ9UF47 199 aa26■■□□□ 1.75
ITGA5-206ENST00000550141 PABPN1Q86U42 306 aaKnown RBP eCLIP25.99■■□□□ 1.75
ITGA5-206ENST00000550141 UNC13AQ9UPW8 1703 aa25.98■■□□□ 1.75
ITGA5-206ENST00000550141 ZCCHC6Q5VYS8 1495 aaKnown RBP25.97■■□□□ 1.75
ITGA5-206ENST00000550141 DCAF1Q9Y4B6 1507 aa25.86■■□□□ 1.73
ITGA5-206ENST00000550141 BICRAQ9NZM4 1560 aa25.79■■□□□ 1.72
ITGA5-206ENST00000550141 SCRIBQ14160 1630 aa25.54■■□□□ 1.68
ITGA5-206ENST00000550141 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
ITGA5-206ENST00000550141 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
ITGA5-206ENST00000550141 EIF4G1Q04637 1599 aaKnown RBP25.16■■□□□ 1.62
ITGA5-206ENST00000550141 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
ITGA5-206ENST00000550141 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
ITGA5-206ENST00000550141 SMARCA4P51532 1647 aa24.38■■□□□ 1.49
ITGA5-206ENST00000550141 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
ITGA5-206ENST00000550141 SMARCA2P51531 1590 aa24.32■■□□□ 1.48
ITGA5-206ENST00000550141 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
ITGA5-206ENST00000550141 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
ITGA5-206ENST00000550141 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
ITGA5-206ENST00000550141 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
ITGA5-206ENST00000550141 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
ITGA5-206ENST00000550141 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
ITGA5-206ENST00000550141 NESP48681 1621 aa23.98■■□□□ 1.43
ITGA5-206ENST00000550141 CUX2O14529 1486 aa23.95■■□□□ 1.42
ITGA5-206ENST00000550141 WIZO95785 1651 aa23.84■■□□□ 1.41
ITGA5-206ENST00000550141 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
ITGA5-206ENST00000550141 DNAJC5Q9H3Z4 198 aa23.77■■□□□ 1.4
ITGA5-206ENST00000550141 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
ITGA5-206ENST00000550141 CADPSQ9ULU8 1353 aa23.7■■□□□ 1.38
ITGA5-206ENST00000550141 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
ITGA5-206ENST00000550141 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
ITGA5-206ENST00000550141 KIF21AQ7Z4S6 1674 aa23.67■■□□□ 1.38
ITGA5-206ENST00000550141 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
ITGA5-206ENST00000550141 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
ITGA5-206ENST00000550141 CFTRP13569 1480 aa23.45■■□□□ 1.34
ITGA5-206ENST00000550141 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
ITGA5-206ENST00000550141 FANCD2Q9BXW9 1451 aa23.42■■□□□ 1.34
ITGA5-206ENST00000550141 WDR62O43379 1518 aa23.41■■□□□ 1.34
ITGA5-206ENST00000550141 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
ITGA5-206ENST00000550141 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
ITGA5-206ENST00000550141 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
ITGA5-206ENST00000550141 TOPBP1Q92547 1522 aa22.99■■□□□ 1.27
ITGA5-206ENST00000550141 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
ITGA5-206ENST00000550141 IFT140Q96RY7 1462 aa22.96■■□□□ 1.27
ITGA5-206ENST00000550141 OSCARQ8IYS5 282 aa22.92■■□□□ 1.26
ITGA5-206ENST00000550141 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
ITGA5-206ENST00000550141 ZNF608Q9ULD9 1512 aaPredicted RBP22.9■■□□□ 1.26
ITGA5-206ENST00000550141 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
ITGA5-206ENST00000550141 TRIM41Q8WV44 630 aa22.81■■□□□ 1.24
ITGA5-206ENST00000550141 EIF4G3O43432 1585 aaKnown RBP22.77■■□□□ 1.24
ITGA5-206ENST00000550141 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
ITGA5-206ENST00000550141 POLA1P09884 1462 aaPredicted RBP22.77■■□□□ 1.24
ITGA5-206ENST00000550141 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.233e-10■■■■□ 21.1
ITGA5-206ENST00000550141 RAD54L2Q9Y4B4 1467 aa22.68■■□□□ 1.22
ITGA5-206ENST00000550141 SOGA1O94964 1423 aa22.68■■□□□ 1.22
ITGA5-206ENST00000550141 CUX1P39880 1505 aa22.65■■□□□ 1.22
ITGA5-206ENST00000550141 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
ITGA5-206ENST00000550141 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
ITGA5-206ENST00000550141 CHD1O14646 1710 aa22.58■■□□□ 1.21
ITGA5-206ENST00000550141 FBLN2P98095 1184 aa22.58■■□□□ 1.21
ITGA5-206ENST00000550141 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
ITGA5-206ENST00000550141 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
ITGA5-206ENST00000550141 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
ITGA5-206ENST00000550141 WDR97A6NE52 1622 aa22.55■■□□□ 1.2
ITGA5-206ENST00000550141 ARHGEF11O15085 1522 aa22.52■■□□□ 1.19
ITGA5-206ENST00000550141 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
ITGA5-206ENST00000550141 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
ITGA5-206ENST00000550141 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
ITGA5-206ENST00000550141 MAGI1Q96QZ7 1491 aaPredicted RBP22.44■■□□□ 1.18
ITGA5-206ENST00000550141 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
ITGA5-206ENST00000550141 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
ITGA5-206ENST00000550141 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
ITGA5-206ENST00000550141 WRNQ14191 1432 aaPredicted RBP eCLIP22.37■■□□□ 1.17
ITGA5-206ENST00000550141 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
ITGA5-206ENST00000550141 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
ITGA5-206ENST00000550141 TOP2BQ02880 1626 aa22.34■■□□□ 1.17
ITGA5-206ENST00000550141 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
ITGA5-206ENST00000550141 SYNJ1O43426 1573 aa22.33■■□□□ 1.17
ITGA5-206ENST00000550141 BIVM-ERCC5R4GMW8 1640 aa22.33■■□□□ 1.17
ITGA5-206ENST00000550141 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
ITGA5-206ENST00000550141 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
ITGA5-206ENST00000550141 GRIN2AQ12879 1464 aa22.16■■□□□ 1.14
ITGA5-206ENST00000550141 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
ITGA5-206ENST00000550141 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
ITGA5-206ENST00000550141 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
ITGA5-206ENST00000550141 NUP160Q12769 1436 aa22.08■■□□□ 1.13
ITGA5-206ENST00000550141 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
ITGA5-206ENST00000550141 CEP170Q5SW79 1584 aa22.07■■□□□ 1.12
ITGA5-206ENST00000550141 ERCC6L2Q5T890 1561 aa21.98■■□□□ 1.11
ITGA5-206ENST00000550141 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
ITGA5-206ENST00000550141 KIF27Q86VH2 1401 aa21.93■■□□□ 1.1
ITGA5-206ENST00000550141 IGF1RP08069 1367 aa21.89■■□□□ 1.1
ITGA5-206ENST00000550141 JPH4Q96JJ6 628 aa21.89■■□□□ 1.09
ITGA5-206ENST00000550141 PRG4Q92954 1404 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms