RNA–Protein interactions for RNA: ENST00000550089.1

AL133304.3-201, humanhuman

TSL 3 BASIC

Gene AL133304.3, Length 477 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL133304.3-201ENST00000550089 NISCHQ9Y2I1 1504 aa23.44■■□□□ 1.34
AL133304.3-201ENST00000550089 ABCC9O60706 1549 aa22.25■■□□□ 1.15
AL133304.3-201ENST00000550089 DNAJC5BQ9UF47 199 aa21.76■■□□□ 1.07
AL133304.3-201ENST00000550089 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1.01
AL133304.3-201ENST00000550089 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.92
AL133304.3-201ENST00000550089 PABPN1Q86U42 306 aaKnown RBP eCLIP20.65■□□□□ 0.9
AL133304.3-201ENST00000550089 DNAJC5Q9H3Z4 198 aa20.63■□□□□ 0.89
AL133304.3-201ENST00000550089 NACADO15069 1562 aa20.44■□□□□ 0.86
AL133304.3-201ENST00000550089 UNC13AQ9UPW8 1703 aa20.24■□□□□ 0.83
AL133304.3-201ENST00000550089 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
AL133304.3-201ENST00000550089 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
AL133304.3-201ENST00000550089 CECR2Q9BXF3 1484 aa20.15■□□□□ 0.82
AL133304.3-201ENST00000550089 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
AL133304.3-201ENST00000550089 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
AL133304.3-201ENST00000550089 SHROOM4Q9ULL8 1493 aa19.85■□□□□ 0.77
AL133304.3-201ENST00000550089 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
AL133304.3-201ENST00000550089 CUX2O14529 1486 aa19.54■□□□□ 0.72
AL133304.3-201ENST00000550089 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
AL133304.3-201ENST00000550089 DCAF1Q9Y4B6 1507 aa19.31■□□□□ 0.68
AL133304.3-201ENST00000550089 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
AL133304.3-201ENST00000550089 ERCC6Q03468 1493 aa19.26■□□□□ 0.67
AL133304.3-201ENST00000550089 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
AL133304.3-201ENST00000550089 NCAPD3P42695 1498 aa18.94■□□□□ 0.62
AL133304.3-201ENST00000550089 NESP48681 1621 aa18.87■□□□□ 0.61
AL133304.3-201ENST00000550089 THOC2Q8NI27 1593 aaKnown RBP18.79■□□□□ 0.6
AL133304.3-201ENST00000550089 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
AL133304.3-201ENST00000550089 HMGXB3Q12766 1538 aa18.64■□□□□ 0.57
AL133304.3-201ENST00000550089 SMARCA2P51531 1590 aa18.6■□□□□ 0.57
AL133304.3-201ENST00000550089 OSCARQ8IYS5 282 aa18.6■□□□□ 0.57
AL133304.3-201ENST00000550089 LAMC3Q9Y6N6 1575 aa18.58■□□□□ 0.56
AL133304.3-201ENST00000550089 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
AL133304.3-201ENST00000550089 KIF21AQ7Z4S6 1674 aa18.52■□□□□ 0.56
AL133304.3-201ENST00000550089 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
AL133304.3-201ENST00000550089 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.55
AL133304.3-201ENST00000550089 SMARCA4P51532 1647 aa18.43■□□□□ 0.54
AL133304.3-201ENST00000550089 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
AL133304.3-201ENST00000550089 WDR62O43379 1518 aa18.38■□□□□ 0.53
AL133304.3-201ENST00000550089 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
AL133304.3-201ENST00000550089 CADPSQ9ULU8 1353 aa18.32■□□□□ 0.52
AL133304.3-201ENST00000550089 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
AL133304.3-201ENST00000550089 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
AL133304.3-201ENST00000550089 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
AL133304.3-201ENST00000550089 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
AL133304.3-201ENST00000550089 TRHP20396 242 aaPredicted RBP18.26■□□□□ 0.51
AL133304.3-201ENST00000550089 CYB5RLQ6IPT4 315 aa18.2■□□□□ 0.5
AL133304.3-201ENST00000550089 ARHGEF11O15085 1522 aa18.19■□□□□ 0.5
AL133304.3-201ENST00000550089 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.5
AL133304.3-201ENST00000550089 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
AL133304.3-201ENST00000550089 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
AL133304.3-201ENST00000550089 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
AL133304.3-201ENST00000550089 ARAP1Q96P48 1450 aa17.96■□□□□ 0.47
AL133304.3-201ENST00000550089 CFTRP13569 1480 aa17.9■□□□□ 0.46
AL133304.3-201ENST00000550089 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
AL133304.3-201ENST00000550089 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
AL133304.3-201ENST00000550089 RSF1Q96T23 1441 aaPredicted RBP17.83■□□□□ 0.45
AL133304.3-201ENST00000550089 WIZO95785 1651 aa17.76■□□□□ 0.43
AL133304.3-201ENST00000550089 ILDR1Q86SU0 546 aaPredicted RBP17.74■□□□□ 0.43
AL133304.3-201ENST00000550089 FBLN2P98095 1184 aa17.73■□□□□ 0.43
AL133304.3-201ENST00000550089 CHD1O14646 1710 aa17.71■□□□□ 0.43
AL133304.3-201ENST00000550089 EIF4G3O43432 1585 aaKnown RBP17.69■□□□□ 0.42
AL133304.3-201ENST00000550089 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
AL133304.3-201ENST00000550089 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
AL133304.3-201ENST00000550089 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
AL133304.3-201ENST00000550089 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
AL133304.3-201ENST00000550089 PRDM2Q13029 1718 aa17.52■□□□□ 0.39
AL133304.3-201ENST00000550089 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
AL133304.3-201ENST00000550089 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
AL133304.3-201ENST00000550089 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
AL133304.3-201ENST00000550089 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
AL133304.3-201ENST00000550089 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
AL133304.3-201ENST00000550089 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
AL133304.3-201ENST00000550089 TDRD9Q8NDG6 1382 aaKnown RBP17.42■□□□□ 0.38
AL133304.3-201ENST00000550089 SNAPC4Q5SXM2 1469 aa17.4■□□□□ 0.38
AL133304.3-201ENST00000550089 KDM4FA0A1W2PPD8 638 aa17.39■□□□□ 0.37
AL133304.3-201ENST00000550089 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
AL133304.3-201ENST00000550089 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
AL133304.3-201ENST00000550089 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
AL133304.3-201ENST00000550089 SOGA1O94964 1423 aa17.34■□□□□ 0.37
AL133304.3-201ENST00000550089 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.37
AL133304.3-201ENST00000550089 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
AL133304.3-201ENST00000550089 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
AL133304.3-201ENST00000550089 GRIN2BQ13224 1484 aa17.25■□□□□ 0.35
AL133304.3-201ENST00000550089 KIF13AQ9H1H9 1805 aa17.24■□□□□ 0.35
AL133304.3-201ENST00000550089 ERCC6L2Q5T890 1561 aa17.2■□□□□ 0.34
AL133304.3-201ENST00000550089 FAM69CQ0P6D2 419 aa17.17■□□□□ 0.34
AL133304.3-201ENST00000550089 FGD5Q6ZNL6 1462 aa17.15■□□□□ 0.34
AL133304.3-201ENST00000550089 ABCC10Q5T3U5 1492 aa17.11■□□□□ 0.33
AL133304.3-201ENST00000550089 CEP170Q5SW79 1584 aa17.09■□□□□ 0.33
AL133304.3-201ENST00000550089 KDM6BO15054 1643 aa17.04■□□□□ 0.32
AL133304.3-201ENST00000550089 FBXO41Q8TF61 875 aa17.03■□□□□ 0.32
AL133304.3-201ENST00000550089 PBRM1Q86U86 1689 aa17.03■□□□□ 0.32
AL133304.3-201ENST00000550089 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
AL133304.3-201ENST00000550089 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.32
AL133304.3-201ENST00000550089 NUP160Q12769 1436 aa17.02■□□□□ 0.31
AL133304.3-201ENST00000550089 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
AL133304.3-201ENST00000550089 CUX1P39880 1505 aa16.99■□□□□ 0.31
AL133304.3-201ENST00000550089 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
AL133304.3-201ENST00000550089 DIP2BQ9P265 1576 aa16.97■□□□□ 0.31
AL133304.3-201ENST00000550089 MAPKBP1O60336 1514 aa16.96■□□□□ 0.31
AL133304.3-201ENST00000550089 ADGRL1O94910 1474 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms