RNA–Protein interactions for RNA: ENST00000550061.1

SLC11A2-220, Transcript of solute carrier family 11 member 2, humanhuman

TSL 3

Gene SLC11A2, Length 652 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A2-220ENST00000550061 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
SLC11A2-220ENST00000550061 ABCC9O60706 1549 aa20.99■□□□□ 0.95
SLC11A2-220ENST00000550061 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
SLC11A2-220ENST00000550061 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
SLC11A2-220ENST00000550061 RB1CC1Q8TDY2 1594 aa19.84■□□□□ 0.77
SLC11A2-220ENST00000550061 NACADO15069 1562 aa19.58■□□□□ 0.73
SLC11A2-220ENST00000550061 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
SLC11A2-220ENST00000550061 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
SLC11A2-220ENST00000550061 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
SLC11A2-220ENST00000550061 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
SLC11A2-220ENST00000550061 MYO15BQ96JP2 1530 aa19.17■□□□□ 0.66
SLC11A2-220ENST00000550061 SHROOM4Q9ULL8 1493 aa19.02■□□□□ 0.63
SLC11A2-220ENST00000550061 CC2D2AQ9P2K1 1620 aa18.99■□□□□ 0.63
SLC11A2-220ENST00000550061 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
SLC11A2-220ENST00000550061 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
SLC11A2-220ENST00000550061 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
SLC11A2-220ENST00000550061 DNAJC5Q9H3Z4 198 aa18.74■□□□□ 0.59
SLC11A2-220ENST00000550061 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
SLC11A2-220ENST00000550061 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
SLC11A2-220ENST00000550061 CUX2O14529 1486 aa18.33■□□□□ 0.53
SLC11A2-220ENST00000550061 ERCC6Q03468 1493 aa18.19■□□□□ 0.5
SLC11A2-220ENST00000550061 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
SLC11A2-220ENST00000550061 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
SLC11A2-220ENST00000550061 ATAD2BQ9ULI0 1458 aa17.91■□□□□ 0.46
SLC11A2-220ENST00000550061 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
SLC11A2-220ENST00000550061 THOC2Q8NI27 1593 aaKnown RBP17.89■□□□□ 0.45
SLC11A2-220ENST00000550061 NESP48681 1621 aa17.88■□□□□ 0.45
SLC11A2-220ENST00000550061 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
SLC11A2-220ENST00000550061 LAMC3Q9Y6N6 1575 aa17.77■□□□□ 0.44
SLC11A2-220ENST00000550061 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
SLC11A2-220ENST00000550061 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
SLC11A2-220ENST00000550061 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
SLC11A2-220ENST00000550061 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
SLC11A2-220ENST00000550061 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
SLC11A2-220ENST00000550061 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
SLC11A2-220ENST00000550061 WDR62O43379 1518 aa17.52■□□□□ 0.4
SLC11A2-220ENST00000550061 MRC2Q9UBG0 1479 aa17.52■□□□□ 0.4
SLC11A2-220ENST00000550061 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
SLC11A2-220ENST00000550061 CADPSQ9ULU8 1353 aa17.44■□□□□ 0.38
SLC11A2-220ENST00000550061 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
SLC11A2-220ENST00000550061 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
SLC11A2-220ENST00000550061 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
SLC11A2-220ENST00000550061 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
SLC11A2-220ENST00000550061 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
SLC11A2-220ENST00000550061 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
SLC11A2-220ENST00000550061 WIZO95785 1651 aa17.24■□□□□ 0.35
SLC11A2-220ENST00000550061 CFTRP13569 1480 aa17.18■□□□□ 0.34
SLC11A2-220ENST00000550061 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
SLC11A2-220ENST00000550061 ARHGEF11O15085 1522 aa17.13■□□□□ 0.33
SLC11A2-220ENST00000550061 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
SLC11A2-220ENST00000550061 IFT140Q96RY7 1462 aa17.03■□□□□ 0.32
SLC11A2-220ENST00000550061 TOP2AP11388 1531 aaKnown RBP17.02■□□□□ 0.32
SLC11A2-220ENST00000550061 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
SLC11A2-220ENST00000550061 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
SLC11A2-220ENST00000550061 CHD1O14646 1710 aa16.95■□□□□ 0.3
SLC11A2-220ENST00000550061 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
SLC11A2-220ENST00000550061 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
SLC11A2-220ENST00000550061 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
SLC11A2-220ENST00000550061 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
SLC11A2-220ENST00000550061 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.29
SLC11A2-220ENST00000550061 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
SLC11A2-220ENST00000550061 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
SLC11A2-220ENST00000550061 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
SLC11A2-220ENST00000550061 AEBP2Q6ZN18 517 aaPredicted RBP16.77■□□□□ 0.28
SLC11A2-220ENST00000550061 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.288e-7■■■■■ 28.7
SLC11A2-220ENST00000550061 CCDC88BA6NC98 1476 aa16.76■□□□□ 0.27
SLC11A2-220ENST00000550061 FBLN2P98095 1184 aa16.72■□□□□ 0.27
SLC11A2-220ENST00000550061 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
SLC11A2-220ENST00000550061 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
SLC11A2-220ENST00000550061 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
SLC11A2-220ENST00000550061 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
SLC11A2-220ENST00000550061 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
SLC11A2-220ENST00000550061 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
SLC11A2-220ENST00000550061 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
SLC11A2-220ENST00000550061 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
SLC11A2-220ENST00000550061 SOGA1O94964 1423 aa16.57■□□□□ 0.24
SLC11A2-220ENST00000550061 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
SLC11A2-220ENST00000550061 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
SLC11A2-220ENST00000550061 GRIN2BQ13224 1484 aa16.53■□□□□ 0.24
SLC11A2-220ENST00000550061 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
SLC11A2-220ENST00000550061 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
SLC11A2-220ENST00000550061 PBRM1Q86U86 1689 aa16.51■□□□□ 0.23
SLC11A2-220ENST00000550061 CUX1P39880 1505 aa16.44■□□□□ 0.22
SLC11A2-220ENST00000550061 ABCA5Q8WWZ7 1642 aa16.39■□□□□ 0.21
SLC11A2-220ENST00000550061 KIF13AQ9H1H9 1805 aa16.38■□□□□ 0.21
SLC11A2-220ENST00000550061 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
SLC11A2-220ENST00000550061 GRIN2AQ12879 1464 aa16.33■□□□□ 0.2
SLC11A2-220ENST00000550061 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
SLC11A2-220ENST00000550061 CEP170Q5SW79 1584 aa16.33■□□□□ 0.2
SLC11A2-220ENST00000550061 SHROOM2Q13796 1616 aa16.31■□□□□ 0.2
SLC11A2-220ENST00000550061 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
SLC11A2-220ENST00000550061 NUP160Q12769 1436 aa16.28■□□□□ 0.2
SLC11A2-220ENST00000550061 FHAD1B1AJZ9 1412 aa16.17■□□□□ 0.18
SLC11A2-220ENST00000550061 ABCC10Q5T3U5 1492 aa16.16■□□□□ 0.18
SLC11A2-220ENST00000550061 MAPKBP1O60336 1514 aa16.16■□□□□ 0.18
SLC11A2-220ENST00000550061 DIP2BQ9P265 1576 aa16.16■□□□□ 0.18
SLC11A2-220ENST00000550061 KDM6BO15054 1643 aa16.15■□□□□ 0.18
SLC11A2-220ENST00000550061 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
SLC11A2-220ENST00000550061 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.17
SLC11A2-220ENST00000550061 PRG4Q92954 1404 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms