RNA–Protein interactions for RNA: ENST00000549941.5

PFKM-217, Transcript of phosphofructokinase, muscle, humanhuman

TSL 3

Gene PFKM, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-217ENST00000549941 NISCHQ9Y2I1 1504 aa30■■■□□ 2.39
PFKM-217ENST00000549941 ABCC9O60706 1549 aa27.28■■□□□ 1.96
PFKM-217ENST00000549941 CCDC180Q9P1Z9 1646 aa27.15■■□□□ 1.94
PFKM-217ENST00000549941 RB1CC1Q8TDY2 1594 aa25.92■■□□□ 1.74
PFKM-217ENST00000549941 DNAJC5BQ9UF47 199 aa25.77■■□□□ 1.72
PFKM-217ENST00000549941 NACADO15069 1562 aa25.69■■□□□ 1.7
PFKM-217ENST00000549941 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
PFKM-217ENST00000549941 PABPN1Q86U42 306 aaKnown RBP eCLIP25.28■■□□□ 1.64
PFKM-217ENST00000549941 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
PFKM-217ENST00000549941 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
PFKM-217ENST00000549941 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
PFKM-217ENST00000549941 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
PFKM-217ENST00000549941 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
PFKM-217ENST00000549941 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
PFKM-217ENST00000549941 CC2D2AQ9P2K1 1620 aa24.69■■□□□ 1.54
PFKM-217ENST00000549941 SCRIBQ14160 1630 aa24.63■■□□□ 1.53
PFKM-217ENST00000549941 CECR2Q9BXF3 1484 aa24.63■■□□□ 1.53
PFKM-217ENST00000549941 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.52
PFKM-217ENST00000549941 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
PFKM-217ENST00000549941 CUX2O14529 1486 aa23.7■■□□□ 1.38
PFKM-217ENST00000549941 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
PFKM-217ENST00000549941 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
PFKM-217ENST00000549941 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
PFKM-217ENST00000549941 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
PFKM-217ENST00000549941 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
PFKM-217ENST00000549941 SMARCA4P51532 1647 aa23.5■■□□□ 1.35
PFKM-217ENST00000549941 NESP48681 1621 aa23.36■■□□□ 1.33
PFKM-217ENST00000549941 BAZ1AQ9NRL2 1556 aaPredicted RBP23.34■■□□□ 1.33
PFKM-217ENST00000549941 BAZ1BQ9UIG0 1483 aaKnown RBP23.31■■□□□ 1.32
PFKM-217ENST00000549941 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
PFKM-217ENST00000549941 THOC2Q8NI27 1593 aaKnown RBP23.28■■□□□ 1.32
PFKM-217ENST00000549941 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
PFKM-217ENST00000549941 KIF21AQ7Z4S6 1674 aa23.14■■□□□ 1.29
PFKM-217ENST00000549941 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
PFKM-217ENST00000549941 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
PFKM-217ENST00000549941 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
PFKM-217ENST00000549941 MRC2Q9UBG0 1479 aa22.89■■□□□ 1.25
PFKM-217ENST00000549941 WDR62O43379 1518 aa22.88■■□□□ 1.25
PFKM-217ENST00000549941 WIZO95785 1651 aa22.82■■□□□ 1.24
PFKM-217ENST00000549941 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
PFKM-217ENST00000549941 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
PFKM-217ENST00000549941 FANCD2Q9BXW9 1451 aa22.67■■□□□ 1.22
PFKM-217ENST00000549941 CFTRP13569 1480 aa22.62■■□□□ 1.21
PFKM-217ENST00000549941 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
PFKM-217ENST00000549941 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
PFKM-217ENST00000549941 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
PFKM-217ENST00000549941 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
PFKM-217ENST00000549941 OSCARQ8IYS5 282 aa22.46■■□□□ 1.19
PFKM-217ENST00000549941 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
PFKM-217ENST00000549941 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
PFKM-217ENST00000549941 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
PFKM-217ENST00000549941 IFT140Q96RY7 1462 aa22.29■■□□□ 1.16
PFKM-217ENST00000549941 ZNF608Q9ULD9 1512 aaPredicted RBP22.25■■□□□ 1.15
PFKM-217ENST00000549941 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
PFKM-217ENST00000549941 TOPBP1Q92547 1522 aa22.22■■□□□ 1.15
PFKM-217ENST00000549941 ARHGEF11O15085 1522 aa22.2■■□□□ 1.14
PFKM-217ENST00000549941 EIF4G3O43432 1585 aaKnown RBP22.19■■□□□ 1.14
PFKM-217ENST00000549941 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
PFKM-217ENST00000549941 DNMBPQ6XZF7 1577 aa22.14■■□□□ 1.13
PFKM-217ENST00000549941 CHD1O14646 1710 aa22.09■■□□□ 1.13
PFKM-217ENST00000549941 TARBP1Q13395 1621 aaKnown RBP22.08■■□□□ 1.13
PFKM-217ENST00000549941 AQRO60306 1485 aaKnown RBP eCLIP21.98■■□□□ 1.111e-6■■■■■ 33.8
PFKM-217ENST00000549941 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
PFKM-217ENST00000549941 ARAP1Q96P48 1450 aa21.95■■□□□ 1.1
PFKM-217ENST00000549941 CYB5RLQ6IPT4 315 aa21.93■■□□□ 1.1
PFKM-217ENST00000549941 WDR97A6NE52 1622 aa21.9■■□□□ 1.1
PFKM-217ENST00000549941 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
PFKM-217ENST00000549941 FBLN2P98095 1184 aa21.83■■□□□ 1.09
PFKM-217ENST00000549941 SOGA1O94964 1423 aa21.81■■□□□ 1.08
PFKM-217ENST00000549941 CLASP1Q7Z460 1538 aa21.81■■□□□ 1.08
PFKM-217ENST00000549941 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
PFKM-217ENST00000549941 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
PFKM-217ENST00000549941 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
PFKM-217ENST00000549941 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
PFKM-217ENST00000549941 TRHP20396 242 aaPredicted RBP21.77■■□□□ 1.08
PFKM-217ENST00000549941 MAGI1Q96QZ7 1491 aaPredicted RBP21.77■■□□□ 1.07
PFKM-217ENST00000549941 CUX1P39880 1505 aa21.73■■□□□ 1.07
PFKM-217ENST00000549941 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
PFKM-217ENST00000549941 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
PFKM-217ENST00000549941 PBRM1Q86U86 1689 aa21.68■■□□□ 1.06
PFKM-217ENST00000549941 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
PFKM-217ENST00000549941 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.05
PFKM-217ENST00000549941 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.04
PFKM-217ENST00000549941 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
PFKM-217ENST00000549941 GRIN2AQ12879 1464 aa21.45■■□□□ 1.02
PFKM-217ENST00000549941 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
PFKM-217ENST00000549941 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
PFKM-217ENST00000549941 NUP160Q12769 1436 aa21.39■■□□□ 1.02
PFKM-217ENST00000549941 CEP170Q5SW79 1584 aa21.39■■□□□ 1.01
PFKM-217ENST00000549941 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
PFKM-217ENST00000549941 BIVM-ERCC5R4GMW8 1640 aa21.37■■□□□ 1.01
PFKM-217ENST00000549941 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
PFKM-217ENST00000549941 WRNQ14191 1432 aaPredicted RBP eCLIP21.36■■□□□ 1.01
PFKM-217ENST00000549941 TOP2BQ02880 1626 aa21.33■■□□□ 1.01
PFKM-217ENST00000549941 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
PFKM-217ENST00000549941 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
PFKM-217ENST00000549941 KIF13AQ9H1H9 1805 aa21.26■□□□□ 0.99
PFKM-217ENST00000549941 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
PFKM-217ENST00000549941 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.98
PFKM-217ENST00000549941 PRG4Q92954 1404 aaPredicted RBP21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms