RNA–Protein interactions for RNA: ENST00000549887.1

SOCS2-209, Transcript of suppressor of cytokine signaling 2, humanhuman

TSL 3

Gene SOCS2, Length 984 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS2-209ENST00000549887 NISCHQ9Y2I1 1504 aa59.08■■■■■ 7.05
SOCS2-209ENST00000549887 CCDC180Q9P1Z9 1646 aa52.61■■■■■ 6.01
SOCS2-209ENST00000549887 ABCC9O60706 1549 aa51.46■■■■■ 5.83
SOCS2-209ENST00000549887 RB1CC1Q8TDY2 1594 aa49.51■■■■■ 5.52
SOCS2-209ENST00000549887 NACADO15069 1562 aa49.44■■■■■ 5.5
SOCS2-209ENST00000549887 DCAF8L2P0C7V8 631 aa49.22■■■■■ 5.47
SOCS2-209ENST00000549887 ZCCHC6Q5VYS8 1495 aaKnown RBP49.22■■■■■ 5.47
SOCS2-209ENST00000549887 MYO15BQ96JP2 1530 aa49.16■■■■■ 5.46
SOCS2-209ENST00000549887 DCAF1Q9Y4B6 1507 aa48.91■■■■■ 5.42
SOCS2-209ENST00000549887 UNC13AQ9UPW8 1703 aa48.43■■■■■ 5.34
SOCS2-209ENST00000549887 BICRAQ9NZM4 1560 aa48.05■■■■■ 5.28
SOCS2-209ENST00000549887 PABPN1Q86U42 306 aaKnown RBP eCLIP48.02■■■■■ 5.28
SOCS2-209ENST00000549887 SCRIBQ14160 1630 aa47.93■■■■■ 5.26
SOCS2-209ENST00000549887 SHROOM4Q9ULL8 1493 aa47.55■■■■■ 5.2
SOCS2-209ENST00000549887 DNAJC5BQ9UF47 199 aa47.29■■■■■ 5.16
SOCS2-209ENST00000549887 EIF4G1Q04637 1599 aaKnown RBP46.77■■■■■ 5.08
SOCS2-209ENST00000549887 CC2D2AQ9P2K1 1620 aa46.58■■■■■ 5.05
SOCS2-209ENST00000549887 CECR2Q9BXF3 1484 aa46.25■■■■■ 5
SOCS2-209ENST00000549887 SMARCA4P51532 1647 aa45.88■■■■■ 4.93
SOCS2-209ENST00000549887 BAZ1AQ9NRL2 1556 aaPredicted RBP45.79■■■■■ 4.92
SOCS2-209ENST00000549887 NCAPD3P42695 1498 aa45.61■■■■■ 4.89
SOCS2-209ENST00000549887 ATAD2BQ9ULI0 1458 aa45.61■■■■■ 4.89
SOCS2-209ENST00000549887 SMARCA2P51531 1590 aa45.57■■■■■ 4.89
SOCS2-209ENST00000549887 MROH2BQ7Z745 1585 aa45.52■■■■■ 4.88
SOCS2-209ENST00000549887 PEG3Q9GZU2 1588 aa45.45■■■■■ 4.87
SOCS2-209ENST00000549887 HMGXB3Q12766 1538 aa45.42■■■■■ 4.86
SOCS2-209ENST00000549887 BAZ1BQ9UIG0 1483 aaKnown RBP45.23■■■■■ 4.83
SOCS2-209ENST00000549887 WIZO95785 1651 aa45.03■■■■■ 4.8
SOCS2-209ENST00000549887 RSF1Q96T23 1441 aaPredicted RBP44.96■■■■■ 4.79
SOCS2-209ENST00000549887 TOP2AP11388 1531 aaKnown RBP44.56■■■■■ 4.72
SOCS2-209ENST00000549887 NESP48681 1621 aa44.53■■■■■ 4.72
SOCS2-209ENST00000549887 LAMC3Q9Y6N6 1575 aa44.44■■■■■ 4.71
SOCS2-209ENST00000549887 ERCC6Q03468 1493 aa44.34■■■■■ 4.69
SOCS2-209ENST00000549887 CADPSQ9ULU8 1353 aa44.25■■■■■ 4.67
SOCS2-209ENST00000549887 PDS5BQ9NTI5 1447 aa44.09■■■■■ 4.65
SOCS2-209ENST00000549887 KIF21AQ7Z4S6 1674 aa44.04■■■■■ 4.64
SOCS2-209ENST00000549887 CCDC88BA6NC98 1476 aa44.01■■■■■ 4.64
SOCS2-209ENST00000549887 CFTRP13569 1480 aa44.01■■■■■ 4.64
SOCS2-209ENST00000549887 CUX2O14529 1486 aa43.96■■■■■ 4.63
SOCS2-209ENST00000549887 THOC2Q8NI27 1593 aaKnown RBP43.93■■■■■ 4.62
SOCS2-209ENST00000549887 FANCD2Q9BXW9 1451 aa43.76■■■■■ 4.6
SOCS2-209ENST00000549887 CEP164Q9UPV0 1460 aa43.71■■■■■ 4.59
SOCS2-209ENST00000549887 PRDM2Q13029 1718 aa43.71■■■■■ 4.59
SOCS2-209ENST00000549887 MRC2Q9UBG0 1479 aa43.67■■■■■ 4.58
SOCS2-209ENST00000549887 SUPT5HO00267 1087 aaKnown RBP43.65■■■■■ 4.58
SOCS2-209ENST00000549887 WDR62O43379 1518 aa43.56■■■■■ 4.56
SOCS2-209ENST00000549887 URB2Q14146 1524 aaKnown RBP43.34■■■■■ 4.53
SOCS2-209ENST00000549887 TOPBP1Q92547 1522 aa43.06■■■■■ 4.48
SOCS2-209ENST00000549887 ABCC8Q09428 1581 aa43.04■■■■■ 4.48
SOCS2-209ENST00000549887 DNMBPQ6XZF7 1577 aa43.02■■■■■ 4.48
SOCS2-209ENST00000549887 IFT140Q96RY7 1462 aa42.8■■■■■ 4.44
SOCS2-209ENST00000549887 CUX1P39880 1505 aa42.71■■■■■ 4.43
SOCS2-209ENST00000549887 POLA1P09884 1462 aaPredicted RBP42.69■■■■■ 4.42
SOCS2-209ENST00000549887 DNAJC5Q9H3Z4 198 aa42.64■■■■■ 4.42
SOCS2-209ENST00000549887 TARBP1Q13395 1621 aaKnown RBP42.63■■■■■ 4.41
SOCS2-209ENST00000549887 ZNF608Q9ULD9 1512 aaPredicted RBP42.61■■■■■ 4.41
SOCS2-209ENST00000549887 FGD5Q6ZNL6 1462 aa42.57■■■■■ 4.41
SOCS2-209ENST00000549887 EIF4G3O43432 1585 aaKnown RBP42.48■■■■■ 4.39
SOCS2-209ENST00000549887 RAD54L2Q9Y4B4 1467 aa42.48■■■■■ 4.39
SOCS2-209ENST00000549887 SOGA1O94964 1423 aa42.47■■■■■ 4.39
SOCS2-209ENST00000549887 WRNQ14191 1432 aaPredicted RBP eCLIP42.38■■■■■ 4.38
SOCS2-209ENST00000549887 BIVM-ERCC5R4GMW8 1640 aa42.35■■■■■ 4.37
SOCS2-209ENST00000549887 AQRO60306 1485 aaKnown RBP eCLIP42.34■■■■■ 4.373e-9■■■■□ 24
SOCS2-209ENST00000549887 TOP2BQ02880 1626 aa42.34■■■■■ 4.37
SOCS2-209ENST00000549887 SYNJ1O43426 1573 aa42.32■■■■■ 4.37
SOCS2-209ENST00000549887 WDR97A6NE52 1622 aa42.31■■■■■ 4.36
SOCS2-209ENST00000549887 TDRD9Q8NDG6 1382 aaKnown RBP42.24■■■■■ 4.35
SOCS2-209ENST00000549887 ABCA10Q8WWZ4 1543 aa42.17■■■■■ 4.34
SOCS2-209ENST00000549887 OSCARQ8IYS5 282 aa42.04■■■■■ 4.32
SOCS2-209ENST00000549887 ABCA5Q8WWZ7 1642 aa42.04■■■■■ 4.32
SOCS2-209ENST00000549887 GRIN2BQ13224 1484 aa42.01■■■■■ 4.32
SOCS2-209ENST00000549887 GAPVD1Q14C86 1478 aa42■■■■■ 4.31
SOCS2-209ENST00000549887 SNAPC4Q5SXM2 1469 aa41.97■■■■■ 4.31
SOCS2-209ENST00000549887 PBRM1Q86U86 1689 aa41.96■■■■■ 4.31
SOCS2-209ENST00000549887 CHD1O14646 1710 aa41.95■■■■■ 4.31
SOCS2-209ENST00000549887 MAGI1Q96QZ7 1491 aaPredicted RBP41.92■■■■■ 4.3
SOCS2-209ENST00000549887 FBLN2P98095 1184 aa41.77■■■■■ 4.28
SOCS2-209ENST00000549887 SYNJ2O15056 1496 aa41.76■■■■■ 4.28
SOCS2-209ENST00000549887 CHMP7Q8WUX9 453 aaPredicted RBP41.67■■■■■ 4.26
SOCS2-209ENST00000549887 ERICH3Q5RHP9 1530 aa41.67■■■■■ 4.26
SOCS2-209ENST00000549887 ADAMTS12P58397 1594 aa41.63■■■■■ 4.26
SOCS2-209ENST00000549887 FHAD1B1AJZ9 1412 aa41.52■■■■■ 4.24
SOCS2-209ENST00000549887 CLASP1Q7Z460 1538 aa41.51■■■■■ 4.24
SOCS2-209ENST00000549887 KIF27Q86VH2 1401 aa41.49■■■■■ 4.23
SOCS2-209ENST00000549887 GRIN2AQ12879 1464 aa41.48■■■■■ 4.23
SOCS2-209ENST00000549887 RIMBP3CA6NJZ7 1639 aa41.46■■■■■ 4.23
SOCS2-209ENST00000549887 RIMBP3BA6NNM3 1639 aa41.46■■■■■ 4.23
SOCS2-209ENST00000549887 RIMBP3Q9UFD9 1639 aa41.46■■■■■ 4.23
SOCS2-209ENST00000549887 ARHGEF11O15085 1522 aa41.44■■■■■ 4.22
SOCS2-209ENST00000549887 IGF1RP08069 1367 aa41.33■■■■■ 4.21
SOCS2-209ENST00000549887 NUP160Q12769 1436 aa41.32■■■■■ 4.21
SOCS2-209ENST00000549887 CEP170Q5SW79 1584 aa41.3■■■■■ 4.2
SOCS2-209ENST00000549887 CUL7Q14999 1698 aa41.29■■■■■ 4.2
SOCS2-209ENST00000549887 TRIM41Q8WV44 630 aa41.24■■■■■ 4.19
SOCS2-209ENST00000549887 ARAP1Q96P48 1450 aa41.1■■■■■ 4.17
SOCS2-209ENST00000549887 RUSC2Q8N2Y8 1516 aa41.1■■■■■ 4.17
SOCS2-209ENST00000549887 CARMIL1Q5VZK9 1371 aa41.07■■■■■ 4.16
SOCS2-209ENST00000549887 SHROOM2Q13796 1616 aa41.04■■■■■ 4.16
SOCS2-209ENST00000549887 CYB5RLQ6IPT4 315 aa40.96■■■■■ 4.15
SOCS2-209ENST00000549887 ERCC6L2Q5T890 1561 aa40.91■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms