RNA–Protein interactions for RNA: ENST00000549848.5

SCRN3-214, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-214ENST00000549848 NISCHQ9Y2I1 1504 aa32.65■■■□□ 2.82
SCRN3-214ENST00000549848 CCDC180Q9P1Z9 1646 aa29.19■■■□□ 2.26
SCRN3-214ENST00000549848 ABCC9O60706 1549 aa29.17■■■□□ 2.26
SCRN3-214ENST00000549848 RB1CC1Q8TDY2 1594 aa27.79■■■□□ 2.04
SCRN3-214ENST00000549848 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
SCRN3-214ENST00000549848 NACADO15069 1562 aa27.61■■■□□ 2.01
SCRN3-214ENST00000549848 DNAJC5BQ9UF47 199 aa27.27■■□□□ 1.96
SCRN3-214ENST00000549848 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.95
SCRN3-214ENST00000549848 MYO15BQ96JP2 1530 aa27.24■■□□□ 1.95
SCRN3-214ENST00000549848 UNC13AQ9UPW8 1703 aa27.07■■□□□ 1.92
SCRN3-214ENST00000549848 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
SCRN3-214ENST00000549848 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.9
SCRN3-214ENST00000549848 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
SCRN3-214ENST00000549848 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
SCRN3-214ENST00000549848 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
SCRN3-214ENST00000549848 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
SCRN3-214ENST00000549848 EIF4G1Q04637 1599 aaKnown RBP26.28■■□□□ 1.8
SCRN3-214ENST00000549848 CECR2Q9BXF3 1484 aa26.26■■□□□ 1.79
SCRN3-214ENST00000549848 NCAPD3P42695 1498 aa25.51■■□□□ 1.67
SCRN3-214ENST00000549848 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
SCRN3-214ENST00000549848 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
SCRN3-214ENST00000549848 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
SCRN3-214ENST00000549848 BAZ1AQ9NRL2 1556 aaPredicted RBP25.34■■□□□ 1.65
SCRN3-214ENST00000549848 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
SCRN3-214ENST00000549848 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
SCRN3-214ENST00000549848 ERCC6Q03468 1493 aa25.2■■□□□ 1.62
SCRN3-214ENST00000549848 MROH2BQ7Z745 1585 aa25.15■■□□□ 1.62
SCRN3-214ENST00000549848 PEG3Q9GZU2 1588 aa25.15■■□□□ 1.62
SCRN3-214ENST00000549848 NESP48681 1621 aa25.07■■□□□ 1.6
SCRN3-214ENST00000549848 CUX2O14529 1486 aa25.06■■□□□ 1.6
SCRN3-214ENST00000549848 DNAJC5Q9H3Z4 198 aa24.97■■□□□ 1.59
SCRN3-214ENST00000549848 LAMC3Q9Y6N6 1575 aa24.89■■□□□ 1.58
SCRN3-214ENST00000549848 WIZO95785 1651 aa24.85■■□□□ 1.57
SCRN3-214ENST00000549848 PDS5BQ9NTI5 1447 aa24.81■■□□□ 1.56
SCRN3-214ENST00000549848 CADPSQ9ULU8 1353 aa24.77■■□□□ 1.56
SCRN3-214ENST00000549848 THOC2Q8NI27 1593 aaKnown RBP24.73■■□□□ 1.55
SCRN3-214ENST00000549848 KIF21AQ7Z4S6 1674 aa24.7■■□□□ 1.54
SCRN3-214ENST00000549848 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
SCRN3-214ENST00000549848 MRC2Q9UBG0 1479 aa24.55■■□□□ 1.52
SCRN3-214ENST00000549848 TOP2AP11388 1531 aaKnown RBP24.55■■□□□ 1.52
SCRN3-214ENST00000549848 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
SCRN3-214ENST00000549848 CFTRP13569 1480 aa24.47■■□□□ 1.51
SCRN3-214ENST00000549848 FANCD2Q9BXW9 1451 aa24.47■■□□□ 1.51
SCRN3-214ENST00000549848 WDR62O43379 1518 aa24.45■■□□□ 1.5
SCRN3-214ENST00000549848 CCDC88BA6NC98 1476 aa24.31■■□□□ 1.48
SCRN3-214ENST00000549848 URB2Q14146 1524 aaKnown RBP24.24■■□□□ 1.47
SCRN3-214ENST00000549848 PRDM2Q13029 1718 aa24.16■■□□□ 1.46
SCRN3-214ENST00000549848 OSCARQ8IYS5 282 aa24.03■■□□□ 1.44
SCRN3-214ENST00000549848 TOPBP1Q92547 1522 aa24■■□□□ 1.43
SCRN3-214ENST00000549848 IFT140Q96RY7 1462 aa24■■□□□ 1.43
SCRN3-214ENST00000549848 TRIM41Q8WV44 630 aa23.99■■□□□ 1.43
SCRN3-214ENST00000549848 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
SCRN3-214ENST00000549848 ZNF608Q9ULD9 1512 aaPredicted RBP23.93■■□□□ 1.42
SCRN3-214ENST00000549848 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
SCRN3-214ENST00000549848 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
SCRN3-214ENST00000549848 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
SCRN3-214ENST00000549848 AQRO60306 1485 aaKnown RBP eCLIP23.77■■□□□ 1.4
SCRN3-214ENST00000549848 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
SCRN3-214ENST00000549848 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
SCRN3-214ENST00000549848 TARBP1Q13395 1621 aaKnown RBP23.74■■□□□ 1.39
SCRN3-214ENST00000549848 SOGA1O94964 1423 aa23.72■■□□□ 1.39
SCRN3-214ENST00000549848 RAD54L2Q9Y4B4 1467 aa23.7■■□□□ 1.38
SCRN3-214ENST00000549848 FBLN2P98095 1184 aa23.68■■□□□ 1.38
SCRN3-214ENST00000549848 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
SCRN3-214ENST00000549848 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.38
SCRN3-214ENST00000549848 CUX1P39880 1505 aa23.62■■□□□ 1.37
SCRN3-214ENST00000549848 RIMBP3CA6NJZ7 1639 aa23.6■■□□□ 1.37
SCRN3-214ENST00000549848 RIMBP3BA6NNM3 1639 aa23.6■■□□□ 1.37
SCRN3-214ENST00000549848 RIMBP3Q9UFD9 1639 aa23.6■■□□□ 1.37
SCRN3-214ENST00000549848 CHD1O14646 1710 aa23.56■■□□□ 1.36
SCRN3-214ENST00000549848 ARHGEF11O15085 1522 aa23.55■■□□□ 1.36
SCRN3-214ENST00000549848 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
SCRN3-214ENST00000549848 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
SCRN3-214ENST00000549848 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
SCRN3-214ENST00000549848 CYB5RLQ6IPT4 315 aa23.48■■□□□ 1.35
SCRN3-214ENST00000549848 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
SCRN3-214ENST00000549848 MAGI1Q96QZ7 1491 aaPredicted RBP23.43■■□□□ 1.34
SCRN3-214ENST00000549848 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
SCRN3-214ENST00000549848 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
SCRN3-214ENST00000549848 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
SCRN3-214ENST00000549848 WRNQ14191 1432 aaPredicted RBP eCLIP23.35■■□□□ 1.33
SCRN3-214ENST00000549848 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
SCRN3-214ENST00000549848 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
SCRN3-214ENST00000549848 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
SCRN3-214ENST00000549848 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
SCRN3-214ENST00000549848 ABCA5Q8WWZ7 1642 aa23.29■■□□□ 1.32
SCRN3-214ENST00000549848 TOP2BQ02880 1626 aa23.27■■□□□ 1.32
SCRN3-214ENST00000549848 BIVM-ERCC5R4GMW8 1640 aa23.25■■□□□ 1.31
SCRN3-214ENST00000549848 TRHP20396 242 aaPredicted RBP23.22■■□□□ 1.31
SCRN3-214ENST00000549848 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
SCRN3-214ENST00000549848 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
SCRN3-214ENST00000549848 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
SCRN3-214ENST00000549848 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.29
SCRN3-214ENST00000549848 NUP160Q12769 1436 aa23.05■■□□□ 1.28
SCRN3-214ENST00000549848 CEP170Q5SW79 1584 aa23.03■■□□□ 1.28
SCRN3-214ENST00000549848 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
SCRN3-214ENST00000549848 JPH4Q96JJ6 628 aa22.91■■□□□ 1.26
SCRN3-214ENST00000549848 SHROOM2Q13796 1616 aa22.9■■□□□ 1.26
SCRN3-214ENST00000549848 KIF27Q86VH2 1401 aa22.89■■□□□ 1.25
SCRN3-214ENST00000549848 PRG4Q92954 1404 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms