RNA–Protein interactions for RNA: ENST00000549795.5

DDX23-206, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-206ENST00000549795 NISCHQ9Y2I1 1504 aa28.34■■■□□ 2.13
DDX23-206ENST00000549795 ABCC9O60706 1549 aa26.31■■□□□ 1.8
DDX23-206ENST00000549795 CCDC180Q9P1Z9 1646 aa25.56■■□□□ 1.68
DDX23-206ENST00000549795 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
DDX23-206ENST00000549795 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
DDX23-206ENST00000549795 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
DDX23-206ENST00000549795 DCAF8L2P0C7V8 631 aa24.47■■□□□ 1.51
DDX23-206ENST00000549795 NACADO15069 1562 aa24.4■■□□□ 1.5
DDX23-206ENST00000549795 UNC13AQ9UPW8 1703 aa24.03■■□□□ 1.44
DDX23-206ENST00000549795 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
DDX23-206ENST00000549795 MYO15BQ96JP2 1530 aa23.83■■□□□ 1.41
DDX23-206ENST00000549795 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
DDX23-206ENST00000549795 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
DDX23-206ENST00000549795 DNAJC5Q9H3Z4 198 aa23.64■■□□□ 1.37
DDX23-206ENST00000549795 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
DDX23-206ENST00000549795 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
DDX23-206ENST00000549795 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
DDX23-206ENST00000549795 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
DDX23-206ENST00000549795 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
DDX23-206ENST00000549795 CUX2O14529 1486 aa22.85■■□□□ 1.25
DDX23-206ENST00000549795 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
DDX23-206ENST00000549795 NCAPD3P42695 1498 aa22.58■■□□□ 1.2
DDX23-206ENST00000549795 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
DDX23-206ENST00000549795 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
DDX23-206ENST00000549795 NESP48681 1621 aa22.41■■□□□ 1.18
DDX23-206ENST00000549795 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
DDX23-206ENST00000549795 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
DDX23-206ENST00000549795 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
DDX23-206ENST00000549795 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
DDX23-206ENST00000549795 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
DDX23-206ENST00000549795 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
DDX23-206ENST00000549795 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
DDX23-206ENST00000549795 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
DDX23-206ENST00000549795 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
DDX23-206ENST00000549795 PEG3Q9GZU2 1588 aa21.94■■□□□ 1.1
DDX23-206ENST00000549795 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
DDX23-206ENST00000549795 OSCARQ8IYS5 282 aa21.9■■□□□ 1.1
DDX23-206ENST00000549795 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
DDX23-206ENST00000549795 MROH2BQ7Z745 1585 aa21.83■■□□□ 1.09
DDX23-206ENST00000549795 WDR62O43379 1518 aa21.8■■□□□ 1.08
DDX23-206ENST00000549795 CEP164Q9UPV0 1460 aa21.69■■□□□ 1.06
DDX23-206ENST00000549795 FANCD2Q9BXW9 1451 aa21.63■■□□□ 1.05
DDX23-206ENST00000549795 WIZO95785 1651 aa21.53■■□□□ 1.04
DDX23-206ENST00000549795 CFTRP13569 1480 aa21.48■■□□□ 1.03
DDX23-206ENST00000549795 RIMBP3CA6NJZ7 1639 aa21.47■■□□□ 1.03
DDX23-206ENST00000549795 RIMBP3BA6NNM3 1639 aa21.47■■□□□ 1.03
DDX23-206ENST00000549795 RIMBP3Q9UFD9 1639 aa21.47■■□□□ 1.03
DDX23-206ENST00000549795 CYB5RLQ6IPT4 315 aa21.45■■□□□ 1.02
DDX23-206ENST00000549795 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
DDX23-206ENST00000549795 TRHP20396 242 aaPredicted RBP21.43■■□□□ 1.02
DDX23-206ENST00000549795 ARHGEF11O15085 1522 aa21.38■■□□□ 1.01
DDX23-206ENST00000549795 ZNF608Q9ULD9 1512 aaPredicted RBP21.3■■□□□ 1
DDX23-206ENST00000549795 IFT140Q96RY7 1462 aa21.29■■□□□ 1
DDX23-206ENST00000549795 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
DDX23-206ENST00000549795 FBLN2P98095 1184 aa21.21■□□□□ 0.99
DDX23-206ENST00000549795 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
DDX23-206ENST00000549795 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
DDX23-206ENST00000549795 TOPBP1Q92547 1522 aa21.13■□□□□ 0.97
DDX23-206ENST00000549795 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
DDX23-206ENST00000549795 AQRO60306 1485 aaKnown RBP eCLIP21.1■□□□□ 0.973e-7■■■■■ 29.6
DDX23-206ENST00000549795 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
DDX23-206ENST00000549795 ABCC8Q09428 1581 aa21.08■□□□□ 0.97
DDX23-206ENST00000549795 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
DDX23-206ENST00000549795 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
DDX23-206ENST00000549795 CHD1O14646 1710 aa21.01■□□□□ 0.95
DDX23-206ENST00000549795 DNMBPQ6XZF7 1577 aa20.96■□□□□ 0.95
DDX23-206ENST00000549795 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
DDX23-206ENST00000549795 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
DDX23-206ENST00000549795 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
DDX23-206ENST00000549795 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
DDX23-206ENST00000549795 RAD54L2Q9Y4B4 1467 aa20.86■□□□□ 0.93
DDX23-206ENST00000549795 SOGA1O94964 1423 aa20.86■□□□□ 0.93
DDX23-206ENST00000549795 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
DDX23-206ENST00000549795 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
DDX23-206ENST00000549795 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
DDX23-206ENST00000549795 MAGI1Q96QZ7 1491 aaPredicted RBP20.71■□□□□ 0.91
DDX23-206ENST00000549795 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
DDX23-206ENST00000549795 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
DDX23-206ENST00000549795 SYNJ2O15056 1496 aa20.67■□□□□ 0.9
DDX23-206ENST00000549795 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
DDX23-206ENST00000549795 WDR97A6NE52 1622 aa20.64■□□□□ 0.9
DDX23-206ENST00000549795 CUX1P39880 1505 aa20.53■□□□□ 0.88
DDX23-206ENST00000549795 ERCC6L2Q5T890 1561 aa20.45■□□□□ 0.86
DDX23-206ENST00000549795 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
DDX23-206ENST00000549795 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
DDX23-206ENST00000549795 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
DDX23-206ENST00000549795 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
DDX23-206ENST00000549795 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
DDX23-206ENST00000549795 NPM1P06748 294 aaKnown RBP eCLIP20.35■□□□□ 0.85
DDX23-206ENST00000549795 NUP160Q12769 1436 aa20.34■□□□□ 0.85
DDX23-206ENST00000549795 ABCA5Q8WWZ7 1642 aa20.33■□□□□ 0.84
DDX23-206ENST00000549795 ILDR1Q86SU0 546 aaPredicted RBP20.3■□□□□ 0.84
DDX23-206ENST00000549795 JPH4Q96JJ6 628 aa20.29■□□□□ 0.84
DDX23-206ENST00000549795 KIF13AQ9H1H9 1805 aa20.28■□□□□ 0.84
DDX23-206ENST00000549795 KDM4FA0A1W2PPD8 638 aa20.28■□□□□ 0.84
DDX23-206ENST00000549795 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.84
DDX23-206ENST00000549795 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.83
DDX23-206ENST00000549795 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.83
DDX23-206ENST00000549795 SHROOM2Q13796 1616 aa20.24■□□□□ 0.83
DDX23-206ENST00000549795 ADAMTS12P58397 1594 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms