RNA–Protein interactions for RNA: ENST00000549777.5

RACGAP1-218, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-218ENST00000549777 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
RACGAP1-218ENST00000549777 CHIC1Q5VXU3 224 aa19.87■□□□□ 0.77
RACGAP1-218ENST00000549777 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
RACGAP1-218ENST00000549777 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
RACGAP1-218ENST00000549777 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
RACGAP1-218ENST00000549777 ABCC9O60706 1549 aa17.37■□□□□ 0.37
RACGAP1-218ENST00000549777 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
RACGAP1-218ENST00000549777 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
RACGAP1-218ENST00000549777 RB1CC1Q8TDY2 1594 aa16.29■□□□□ 0.2
RACGAP1-218ENST00000549777 FOXD1Q16676 465 aa16.19■□□□□ 0.18
RACGAP1-218ENST00000549777 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
RACGAP1-218ENST00000549777 DCAF8L2P0C7V8 631 aa16.14■□□□□ 0.17
RACGAP1-218ENST00000549777 PLPPR3Q6T4P5 718 aa16.05■□□□□ 0.16
RACGAP1-218ENST00000549777 NACADO15069 1562 aa16.04■□□□□ 0.16
RACGAP1-218ENST00000549777 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
RACGAP1-218ENST00000549777 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
RACGAP1-218ENST00000549777 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
RACGAP1-218ENST00000549777 CC2D2AQ9P2K1 1620 aa15.62■□□□□ 0.09
RACGAP1-218ENST00000549777 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
RACGAP1-218ENST00000549777 DNAJC5Q9H3Z4 198 aa15.5■□□□□ 0.07
RACGAP1-218ENST00000549777 SCRIBQ14160 1630 aa15.47■□□□□ 0.07
RACGAP1-218ENST00000549777 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
RACGAP1-218ENST00000549777 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.06
RACGAP1-218ENST00000549777 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
RACGAP1-218ENST00000549777 ADRA2BP18089 450 aa15.42■□□□□ 0.06
RACGAP1-218ENST00000549777 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
RACGAP1-218ENST00000549777 DCAF1Q9Y4B6 1507 aa15.28■□□□□ 0.04
RACGAP1-218ENST00000549777 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
RACGAP1-218ENST00000549777 ERCC6Q03468 1493 aa15.04■□□□□ -0
RACGAP1-218ENST00000549777 CUX2O14529 1486 aa15.03■□□□□ -0
RACGAP1-218ENST00000549777 MSH5O43196 834 aa15□□□□□ -0.01
RACGAP1-218ENST00000549777 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
RACGAP1-218ENST00000549777 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
RACGAP1-218ENST00000549777 NESP48681 1621 aa14.8□□□□□ -0.04
RACGAP1-218ENST00000549777 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
RACGAP1-218ENST00000549777 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
RACGAP1-218ENST00000549777 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
RACGAP1-218ENST00000549777 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
RACGAP1-218ENST00000549777 SMARCA4P51532 1647 aa14.64□□□□□ -0.07
RACGAP1-218ENST00000549777 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
RACGAP1-218ENST00000549777 KIF21AQ7Z4S6 1674 aa14.58□□□□□ -0.08
RACGAP1-218ENST00000549777 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
RACGAP1-218ENST00000549777 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
RACGAP1-218ENST00000549777 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
RACGAP1-218ENST00000549777 MRC2Q9UBG0 1479 aa14.42□□□□□ -0.1
RACGAP1-218ENST00000549777 PEG3Q9GZU2 1588 aa14.41□□□□□ -0.1
RACGAP1-218ENST00000549777 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
RACGAP1-218ENST00000549777 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
RACGAP1-218ENST00000549777 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
RACGAP1-218ENST00000549777 WDR62O43379 1518 aa14.36□□□□□ -0.11
RACGAP1-218ENST00000549777 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
RACGAP1-218ENST00000549777 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
RACGAP1-218ENST00000549777 WIZO95785 1651 aa14.24□□□□□ -0.13
RACGAP1-218ENST00000549777 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
RACGAP1-218ENST00000549777 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
RACGAP1-218ENST00000549777 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
RACGAP1-218ENST00000549777 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
RACGAP1-218ENST00000549777 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
RACGAP1-218ENST00000549777 CYB5RLQ6IPT4 315 aa14.11□□□□□ -0.15
RACGAP1-218ENST00000549777 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
RACGAP1-218ENST00000549777 CFTRP13569 1480 aa14.1□□□□□ -0.15
RACGAP1-218ENST00000549777 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
RACGAP1-218ENST00000549777 SCAF1Q9H7N4 1312 aaKnown RBP14.09□□□□□ -0.15
RACGAP1-218ENST00000549777 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
RACGAP1-218ENST00000549777 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
RACGAP1-218ENST00000549777 IFT140Q96RY7 1462 aa14□□□□□ -0.17
RACGAP1-218ENST00000549777 FBLN2P98095 1184 aa13.99□□□□□ -0.17
RACGAP1-218ENST00000549777 TOP2AP11388 1531 aaKnown RBP13.98□□□□□ -0.17
RACGAP1-218ENST00000549777 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
RACGAP1-218ENST00000549777 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
RACGAP1-218ENST00000549777 CHD1O14646 1710 aa13.94□□□□□ -0.18
RACGAP1-218ENST00000549777 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
RACGAP1-218ENST00000549777 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
RACGAP1-218ENST00000549777 ARAP1Q96P48 1450 aa13.93□□□□□ -0.18
RACGAP1-218ENST00000549777 TOPBP1Q92547 1522 aa13.92□□□□□ -0.18
RACGAP1-218ENST00000549777 AQRO60306 1485 aaKnown RBP eCLIP13.89□□□□□ -0.19
RACGAP1-218ENST00000549777 DMRT2Q9Y5R5 561 aa13.89□□□□□ -0.19
RACGAP1-218ENST00000549777 CCDC88BA6NC98 1476 aa13.85□□□□□ -0.19
RACGAP1-218ENST00000549777 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
RACGAP1-218ENST00000549777 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
RACGAP1-218ENST00000549777 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
RACGAP1-218ENST00000549777 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
RACGAP1-218ENST00000549777 TDRD9Q8NDG6 1382 aaKnown RBP13.76□□□□□ -0.21
RACGAP1-218ENST00000549777 CHMP7Q8WUX9 453 aaPredicted RBP13.76□□□□□ -0.21
RACGAP1-218ENST00000549777 CNKSR2Q8WXI2 1034 aa13.75□□□□□ -0.21
RACGAP1-218ENST00000549777 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
RACGAP1-218ENST00000549777 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
RACGAP1-218ENST00000549777 SOGA1O94964 1423 aa13.72□□□□□ -0.21
RACGAP1-218ENST00000549777 SYNJ1O43426 1573 aa13.71□□□□□ -0.22
RACGAP1-218ENST00000549777 CLASP1Q7Z460 1538 aa13.7□□□□□ -0.22
RACGAP1-218ENST00000549777 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
RACGAP1-218ENST00000549777 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
RACGAP1-218ENST00000549777 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
RACGAP1-218ENST00000549777 MAGI1Q96QZ7 1491 aaPredicted RBP13.62□□□□□ -0.23
RACGAP1-218ENST00000549777 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
RACGAP1-218ENST00000549777 KCNA4P22459 653 aa13.61□□□□□ -0.23
RACGAP1-218ENST00000549777 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
RACGAP1-218ENST00000549777 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
RACGAP1-218ENST00000549777 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
RACGAP1-218ENST00000549777 CUX1P39880 1505 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms