RNA–Protein interactions for RNA: ENST00000549769.5

RPH3A-216, Transcript of rabphilin 3A, humanhuman

TSL 4

Gene RPH3A, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-216ENST00000549769 NISCHQ9Y2I1 1504 aa32.47■■■□□ 2.79
RPH3A-216ENST00000549769 ABCC9O60706 1549 aa28.96■■■□□ 2.23
RPH3A-216ENST00000549769 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
RPH3A-216ENST00000549769 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
RPH3A-216ENST00000549769 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
RPH3A-216ENST00000549769 NACADO15069 1562 aa27.45■■□□□ 1.99
RPH3A-216ENST00000549769 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.93
RPH3A-216ENST00000549769 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
RPH3A-216ENST00000549769 DNAJC5BQ9UF47 199 aa27.11■■□□□ 1.93
RPH3A-216ENST00000549769 ZCCHC6Q5VYS8 1495 aaKnown RBP26.88■■□□□ 1.89
RPH3A-216ENST00000549769 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
RPH3A-216ENST00000549769 UNC13AQ9UPW8 1703 aa26.75■■□□□ 1.87
RPH3A-216ENST00000549769 BICRAQ9NZM4 1560 aa26.69■■□□□ 1.86
RPH3A-216ENST00000549769 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
RPH3A-216ENST00000549769 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
RPH3A-216ENST00000549769 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
RPH3A-216ENST00000549769 CECR2Q9BXF3 1484 aa26.09■■□□□ 1.77
RPH3A-216ENST00000549769 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
RPH3A-216ENST00000549769 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
RPH3A-216ENST00000549769 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
RPH3A-216ENST00000549769 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
RPH3A-216ENST00000549769 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
RPH3A-216ENST00000549769 BAZ1AQ9NRL2 1556 aaPredicted RBP25.2■■□□□ 1.62
RPH3A-216ENST00000549769 HMGXB3Q12766 1538 aa25.11■■□□□ 1.61
RPH3A-216ENST00000549769 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
RPH3A-216ENST00000549769 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
RPH3A-216ENST00000549769 MROH2BQ7Z745 1585 aa25■■□□□ 1.59
RPH3A-216ENST00000549769 PEG3Q9GZU2 1588 aa24.98■■□□□ 1.59
RPH3A-216ENST00000549769 CUX2O14529 1486 aa24.89■■□□□ 1.57
RPH3A-216ENST00000549769 NESP48681 1621 aa24.88■■□□□ 1.57
RPH3A-216ENST00000549769 DNAJC5Q9H3Z4 198 aa24.86■■□□□ 1.57
RPH3A-216ENST00000549769 LAMC3Q9Y6N6 1575 aa24.72■■□□□ 1.55
RPH3A-216ENST00000549769 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
RPH3A-216ENST00000549769 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
RPH3A-216ENST00000549769 WIZO95785 1651 aa24.66■■□□□ 1.54
RPH3A-216ENST00000549769 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
RPH3A-216ENST00000549769 THOC2Q8NI27 1593 aaKnown RBP24.47■■□□□ 1.51
RPH3A-216ENST00000549769 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
RPH3A-216ENST00000549769 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
RPH3A-216ENST00000549769 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
RPH3A-216ENST00000549769 CFTRP13569 1480 aa24.36■■□□□ 1.49
RPH3A-216ENST00000549769 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.49
RPH3A-216ENST00000549769 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
RPH3A-216ENST00000549769 WDR62O43379 1518 aa24.25■■□□□ 1.47
RPH3A-216ENST00000549769 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
RPH3A-216ENST00000549769 URB2Q14146 1524 aaKnown RBP24.06■■□□□ 1.44
RPH3A-216ENST00000549769 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
RPH3A-216ENST00000549769 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
RPH3A-216ENST00000549769 PRDM2Q13029 1718 aa23.89■■□□□ 1.41
RPH3A-216ENST00000549769 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
RPH3A-216ENST00000549769 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
RPH3A-216ENST00000549769 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
RPH3A-216ENST00000549769 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
RPH3A-216ENST00000549769 ZNF608Q9ULD9 1512 aaPredicted RBP23.76■■□□□ 1.39
RPH3A-216ENST00000549769 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
RPH3A-216ENST00000549769 AQRO60306 1485 aaKnown RBP eCLIP23.65■■□□□ 1.38
RPH3A-216ENST00000549769 SOGA1O94964 1423 aa23.65■■□□□ 1.38
RPH3A-216ENST00000549769 FBLN2P98095 1184 aa23.62■■□□□ 1.37
RPH3A-216ENST00000549769 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
RPH3A-216ENST00000549769 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
RPH3A-216ENST00000549769 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
RPH3A-216ENST00000549769 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
RPH3A-216ENST00000549769 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
RPH3A-216ENST00000549769 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
RPH3A-216ENST00000549769 CUX1P39880 1505 aa23.46■■□□□ 1.35
RPH3A-216ENST00000549769 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
RPH3A-216ENST00000549769 CYB5RLQ6IPT4 315 aa23.41■■□□□ 1.34
RPH3A-216ENST00000549769 ARHGEF11O15085 1522 aa23.37■■□□□ 1.33
RPH3A-216ENST00000549769 RIMBP3CA6NJZ7 1639 aa23.37■■□□□ 1.33
RPH3A-216ENST00000549769 RIMBP3BA6NNM3 1639 aa23.37■■□□□ 1.33
RPH3A-216ENST00000549769 RIMBP3Q9UFD9 1639 aa23.37■■□□□ 1.33
RPH3A-216ENST00000549769 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
RPH3A-216ENST00000549769 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
RPH3A-216ENST00000549769 SNAPC4Q5SXM2 1469 aa23.34■■□□□ 1.33
RPH3A-216ENST00000549769 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
RPH3A-216ENST00000549769 CHD1O14646 1710 aa23.3■■□□□ 1.32
RPH3A-216ENST00000549769 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
RPH3A-216ENST00000549769 WRNQ14191 1432 aaPredicted RBP eCLIP23.29■■□□□ 1.32
RPH3A-216ENST00000549769 ABCA10Q8WWZ4 1543 aa23.24■■□□□ 1.31
RPH3A-216ENST00000549769 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
RPH3A-216ENST00000549769 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
RPH3A-216ENST00000549769 TRHP20396 242 aaPredicted RBP23.14■■□□□ 1.29
RPH3A-216ENST00000549769 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
RPH3A-216ENST00000549769 TOP2BQ02880 1626 aa23.12■■□□□ 1.29
RPH3A-216ENST00000549769 CLASP1Q7Z460 1538 aa23.09■■□□□ 1.29
RPH3A-216ENST00000549769 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.29
RPH3A-216ENST00000549769 PBRM1Q86U86 1689 aa23.07■■□□□ 1.28
RPH3A-216ENST00000549769 BIVM-ERCC5R4GMW8 1640 aa23.06■■□□□ 1.28
RPH3A-216ENST00000549769 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
RPH3A-216ENST00000549769 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
RPH3A-216ENST00000549769 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
RPH3A-216ENST00000549769 NUP160Q12769 1436 aa22.92■■□□□ 1.26
RPH3A-216ENST00000549769 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
RPH3A-216ENST00000549769 JPH4Q96JJ6 628 aa22.89■■□□□ 1.25
RPH3A-216ENST00000549769 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
RPH3A-216ENST00000549769 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
RPH3A-216ENST00000549769 IGF1RP08069 1367 aa22.82■■□□□ 1.24
RPH3A-216ENST00000549769 PRG4Q92954 1404 aaPredicted RBP22.77■■□□□ 1.24
RPH3A-216ENST00000549769 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
RPH3A-216ENST00000549769 NPM1P06748 294 aaKnown RBP eCLIP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms