RNA–Protein interactions for RNA: ENST00000549630.1

PCED1B-205, Transcript of PC-esterase domain containing 1B, humanhuman

TSL 2

Gene PCED1B, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-205ENST00000549630 NISCHQ9Y2I1 1504 aa32.6■■■□□ 2.81
PCED1B-205ENST00000549630 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
PCED1B-205ENST00000549630 ABCC9O60706 1549 aa28.67■■■□□ 2.18
PCED1B-205ENST00000549630 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
PCED1B-205ENST00000549630 NACADO15069 1562 aa27.34■■□□□ 1.97
PCED1B-205ENST00000549630 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
PCED1B-205ENST00000549630 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
PCED1B-205ENST00000549630 MYO15BQ96JP2 1530 aa27.09■■□□□ 1.93
PCED1B-205ENST00000549630 UNC13AQ9UPW8 1703 aa26.95■■□□□ 1.9
PCED1B-205ENST00000549630 DCAF1Q9Y4B6 1507 aa26.91■■□□□ 1.9
PCED1B-205ENST00000549630 PABPN1Q86U42 306 aaKnown RBP eCLIP26.76■■□□□ 1.87
PCED1B-205ENST00000549630 BICRAQ9NZM4 1560 aa26.7■■□□□ 1.86
PCED1B-205ENST00000549630 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
PCED1B-205ENST00000549630 DNAJC5BQ9UF47 199 aa26.54■■□□□ 1.84
PCED1B-205ENST00000549630 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
PCED1B-205ENST00000549630 EIF4G1Q04637 1599 aaKnown RBP25.96■■□□□ 1.75
PCED1B-205ENST00000549630 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
PCED1B-205ENST00000549630 CECR2Q9BXF3 1484 aa25.74■■□□□ 1.71
PCED1B-205ENST00000549630 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
PCED1B-205ENST00000549630 ATAD2BQ9ULI0 1458 aa25.25■■□□□ 1.63
PCED1B-205ENST00000549630 BAZ1AQ9NRL2 1556 aaPredicted RBP25.25■■□□□ 1.63
PCED1B-205ENST00000549630 NCAPD3P42695 1498 aa25.23■■□□□ 1.63
PCED1B-205ENST00000549630 SMARCA2P51531 1590 aa25.17■■□□□ 1.62
PCED1B-205ENST00000549630 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
PCED1B-205ENST00000549630 HMGXB3Q12766 1538 aa25.11■■□□□ 1.61
PCED1B-205ENST00000549630 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
PCED1B-205ENST00000549630 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
PCED1B-205ENST00000549630 WIZO95785 1651 aa24.91■■□□□ 1.58
PCED1B-205ENST00000549630 NESP48681 1621 aa24.79■■□□□ 1.56
PCED1B-205ENST00000549630 RSF1Q96T23 1441 aaPredicted RBP24.77■■□□□ 1.56
PCED1B-205ENST00000549630 ERCC6Q03468 1493 aa24.66■■□□□ 1.54
PCED1B-205ENST00000549630 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
PCED1B-205ENST00000549630 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
PCED1B-205ENST00000549630 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
PCED1B-205ENST00000549630 CADPSQ9ULU8 1353 aa24.49■■□□□ 1.51
PCED1B-205ENST00000549630 CUX2O14529 1486 aa24.46■■□□□ 1.51
PCED1B-205ENST00000549630 THOC2Q8NI27 1593 aaKnown RBP24.44■■□□□ 1.5
PCED1B-205ENST00000549630 PDS5BQ9NTI5 1447 aa24.41■■□□□ 1.5
PCED1B-205ENST00000549630 CFTRP13569 1480 aa24.32■■□□□ 1.48
PCED1B-205ENST00000549630 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
PCED1B-205ENST00000549630 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
PCED1B-205ENST00000549630 MRC2Q9UBG0 1479 aa24.22■■□□□ 1.47
PCED1B-205ENST00000549630 CEP164Q9UPV0 1460 aa24.2■■□□□ 1.47
PCED1B-205ENST00000549630 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
PCED1B-205ENST00000549630 WDR62O43379 1518 aa24.16■■□□□ 1.46
PCED1B-205ENST00000549630 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
PCED1B-205ENST00000549630 SUPT5HO00267 1087 aaKnown RBP23.99■■□□□ 1.43
PCED1B-205ENST00000549630 DNAJC5Q9H3Z4 198 aa23.96■■□□□ 1.43
PCED1B-205ENST00000549630 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
PCED1B-205ENST00000549630 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
PCED1B-205ENST00000549630 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
PCED1B-205ENST00000549630 IFT140Q96RY7 1462 aa23.69■■□□□ 1.38
PCED1B-205ENST00000549630 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
PCED1B-205ENST00000549630 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
PCED1B-205ENST00000549630 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
PCED1B-205ENST00000549630 CUX1P39880 1505 aa23.62■■□□□ 1.37
PCED1B-205ENST00000549630 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
PCED1B-205ENST00000549630 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
PCED1B-205ENST00000549630 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
PCED1B-205ENST00000549630 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.35
PCED1B-205ENST00000549630 SOGA1O94964 1423 aa23.5■■□□□ 1.35
PCED1B-205ENST00000549630 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
PCED1B-205ENST00000549630 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
PCED1B-205ENST00000549630 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
PCED1B-205ENST00000549630 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
PCED1B-205ENST00000549630 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
PCED1B-205ENST00000549630 CHD1O14646 1710 aa23.35■■□□□ 1.33
PCED1B-205ENST00000549630 TOP2BQ02880 1626 aa23.33■■□□□ 1.32
PCED1B-205ENST00000549630 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.32
PCED1B-205ENST00000549630 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
PCED1B-205ENST00000549630 SNAPC4Q5SXM2 1469 aa23.28■■□□□ 1.32
PCED1B-205ENST00000549630 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
PCED1B-205ENST00000549630 ABCA5Q8WWZ7 1642 aa23.25■■□□□ 1.31
PCED1B-205ENST00000549630 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
PCED1B-205ENST00000549630 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
PCED1B-205ENST00000549630 FBLN2P98095 1184 aa23.22■■□□□ 1.31
PCED1B-205ENST00000549630 MAGI1Q96QZ7 1491 aaPredicted RBP23.18■■□□□ 1.3
PCED1B-205ENST00000549630 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
PCED1B-205ENST00000549630 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
PCED1B-205ENST00000549630 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
PCED1B-205ENST00000549630 TRIM41Q8WV44 630 aa23.12■■□□□ 1.29
PCED1B-205ENST00000549630 SYNJ2O15056 1496 aa23.11■■□□□ 1.29
PCED1B-205ENST00000549630 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
PCED1B-205ENST00000549630 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
PCED1B-205ENST00000549630 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
PCED1B-205ENST00000549630 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
PCED1B-205ENST00000549630 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
PCED1B-205ENST00000549630 GRIN2AQ12879 1464 aa22.96■■□□□ 1.27
PCED1B-205ENST00000549630 FHAD1B1AJZ9 1412 aa22.93■■□□□ 1.26
PCED1B-205ENST00000549630 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
PCED1B-205ENST00000549630 CEP170Q5SW79 1584 aa22.9■■□□□ 1.26
PCED1B-205ENST00000549630 NUP160Q12769 1436 aa22.86■■□□□ 1.25
PCED1B-205ENST00000549630 CYB5RLQ6IPT4 315 aa22.86■■□□□ 1.25
PCED1B-205ENST00000549630 KIF27Q86VH2 1401 aa22.83■■□□□ 1.25
PCED1B-205ENST00000549630 IGF1RP08069 1367 aa22.8■■□□□ 1.24
PCED1B-205ENST00000549630 ERCC6L2Q5T890 1561 aa22.78■■□□□ 1.24
PCED1B-205ENST00000549630 CUL7Q14999 1698 aa22.75■■□□□ 1.23
PCED1B-205ENST00000549630 SHROOM2Q13796 1616 aa22.74■■□□□ 1.23
PCED1B-205ENST00000549630 RUSC2Q8N2Y8 1516 aa22.7■■□□□ 1.22
PCED1B-205ENST00000549630 CARMIL1Q5VZK9 1371 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 548.4 ms