RNA–Protein interactions for RNA: ENST00000549587.1

LMBR1L-212, Transcript of limb development membrane protein 1 like, humanhuman

TSL 2

Gene LMBR1L, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-212ENST00000549587 NISCHQ9Y2I1 1504 aa24.94■■□□□ 1.58
LMBR1L-212ENST00000549587 ABCC9O60706 1549 aa22.48■■□□□ 1.19
LMBR1L-212ENST00000549587 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
LMBR1L-212ENST00000549587 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
LMBR1L-212ENST00000549587 NACADO15069 1562 aa21.18■□□□□ 0.98
LMBR1L-212ENST00000549587 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
LMBR1L-212ENST00000549587 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
LMBR1L-212ENST00000549587 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
LMBR1L-212ENST00000549587 PABPN1Q86U42 306 aaKnown RBP eCLIP20.9■□□□□ 0.94
LMBR1L-212ENST00000549587 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.92
LMBR1L-212ENST00000549587 BICRAQ9NZM4 1560 aa20.79■□□□□ 0.92
LMBR1L-212ENST00000549587 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
LMBR1L-212ENST00000549587 DCAF1Q9Y4B6 1507 aa20.56■□□□□ 0.88
LMBR1L-212ENST00000549587 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
LMBR1L-212ENST00000549587 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
LMBR1L-212ENST00000549587 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
LMBR1L-212ENST00000549587 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
LMBR1L-212ENST00000549587 CECR2Q9BXF3 1484 aa20.23■□□□□ 0.83
LMBR1L-212ENST00000549587 DNAJC5Q9H3Z4 198 aa20.18■□□□□ 0.82
LMBR1L-212ENST00000549587 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
LMBR1L-212ENST00000549587 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
LMBR1L-212ENST00000549587 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
LMBR1L-212ENST00000549587 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
LMBR1L-212ENST00000549587 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
LMBR1L-212ENST00000549587 ERCC6Q03468 1493 aa19.38■□□□□ 0.69
LMBR1L-212ENST00000549587 BAZ1AQ9NRL2 1556 aaPredicted RBP19.36■□□□□ 0.69
LMBR1L-212ENST00000549587 CUX2O14529 1486 aa19.35■□□□□ 0.69
LMBR1L-212ENST00000549587 NESP48681 1621 aa19.33■□□□□ 0.68
LMBR1L-212ENST00000549587 BAZ1BQ9UIG0 1483 aaKnown RBP19.3■□□□□ 0.68
LMBR1L-212ENST00000549587 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.68
LMBR1L-212ENST00000549587 MROH2BQ7Z745 1585 aa19.25■□□□□ 0.67
LMBR1L-212ENST00000549587 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
LMBR1L-212ENST00000549587 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
LMBR1L-212ENST00000549587 KIF21AQ7Z4S6 1674 aa19.14■□□□□ 0.66
LMBR1L-212ENST00000549587 WIZO95785 1651 aa19.08■□□□□ 0.64
LMBR1L-212ENST00000549587 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
LMBR1L-212ENST00000549587 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
LMBR1L-212ENST00000549587 MRC2Q9UBG0 1479 aa18.86■□□□□ 0.61
LMBR1L-212ENST00000549587 WDR62O43379 1518 aa18.83■□□□□ 0.6
LMBR1L-212ENST00000549587 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
LMBR1L-212ENST00000549587 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.6
LMBR1L-212ENST00000549587 TOP2AP11388 1531 aaKnown RBP18.75■□□□□ 0.59
LMBR1L-212ENST00000549587 FANCD2Q9BXW9 1451 aa18.75■□□□□ 0.59
LMBR1L-212ENST00000549587 CFTRP13569 1480 aa18.71■□□□□ 0.59
LMBR1L-212ENST00000549587 PRDM2Q13029 1718 aa18.7■□□□□ 0.58
LMBR1L-212ENST00000549587 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
LMBR1L-212ENST00000549587 URB2Q14146 1524 aaKnown RBP18.63■□□□□ 0.57
LMBR1L-212ENST00000549587 CCDC88BA6NC98 1476 aa18.53■□□□□ 0.56
LMBR1L-212ENST00000549587 OSCARQ8IYS5 282 aa18.43■□□□□ 0.54
LMBR1L-212ENST00000549587 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
LMBR1L-212ENST00000549587 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
LMBR1L-212ENST00000549587 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
LMBR1L-212ENST00000549587 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
LMBR1L-212ENST00000549587 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
LMBR1L-212ENST00000549587 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
LMBR1L-212ENST00000549587 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
LMBR1L-212ENST00000549587 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
LMBR1L-212ENST00000549587 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
LMBR1L-212ENST00000549587 CHD1O14646 1710 aa18.29■□□□□ 0.52
LMBR1L-212ENST00000549587 TARBP1Q13395 1621 aaKnown RBP18.28■□□□□ 0.52
LMBR1L-212ENST00000549587 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.51
LMBR1L-212ENST00000549587 ARHGEF11O15085 1522 aa18.2■□□□□ 0.5
LMBR1L-212ENST00000549587 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
LMBR1L-212ENST00000549587 RAD54L2Q9Y4B4 1467 aa18.16■□□□□ 0.5
LMBR1L-212ENST00000549587 FGD5Q6ZNL6 1462 aa18.1■□□□□ 0.49
LMBR1L-212ENST00000549587 SOGA1O94964 1423 aa18.1■□□□□ 0.49
LMBR1L-212ENST00000549587 CUX1P39880 1505 aa18.08■□□□□ 0.49
LMBR1L-212ENST00000549587 TDRD9Q8NDG6 1382 aaKnown RBP18.08■□□□□ 0.49
LMBR1L-212ENST00000549587 FBLN2P98095 1184 aa18.08■□□□□ 0.48
LMBR1L-212ENST00000549587 WDR97A6NE52 1622 aa18.05■□□□□ 0.48
LMBR1L-212ENST00000549587 SNAPC4Q5SXM2 1469 aa18.04■□□□□ 0.48
LMBR1L-212ENST00000549587 CYB5RLQ6IPT4 315 aa18.03■□□□□ 0.48
LMBR1L-212ENST00000549587 ARAP1Q96P48 1450 aa18.02■□□□□ 0.48
LMBR1L-212ENST00000549587 PBRM1Q86U86 1689 aa18.01■□□□□ 0.47
LMBR1L-212ENST00000549587 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
LMBR1L-212ENST00000549587 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
LMBR1L-212ENST00000549587 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
LMBR1L-212ENST00000549587 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
LMBR1L-212ENST00000549587 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
LMBR1L-212ENST00000549587 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
LMBR1L-212ENST00000549587 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
LMBR1L-212ENST00000549587 SYNJ2O15056 1496 aa17.89■□□□□ 0.45
LMBR1L-212ENST00000549587 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
LMBR1L-212ENST00000549587 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
LMBR1L-212ENST00000549587 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
LMBR1L-212ENST00000549587 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
LMBR1L-212ENST00000549587 TOP2BQ02880 1626 aa17.78■□□□□ 0.44
LMBR1L-212ENST00000549587 ADAMTS12P58397 1594 aa17.77■□□□□ 0.44
LMBR1L-212ENST00000549587 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
LMBR1L-212ENST00000549587 GRIN2AQ12879 1464 aa17.74■□□□□ 0.43
LMBR1L-212ENST00000549587 ERCC6L2Q5T890 1561 aa17.74■□□□□ 0.43
LMBR1L-212ENST00000549587 CEP170Q5SW79 1584 aa17.73■□□□□ 0.43
LMBR1L-212ENST00000549587 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
LMBR1L-212ENST00000549587 SHROOM2Q13796 1616 aa17.65■□□□□ 0.42
LMBR1L-212ENST00000549587 NUP160Q12769 1436 aa17.65■□□□□ 0.42
LMBR1L-212ENST00000549587 FHAD1B1AJZ9 1412 aa17.64■□□□□ 0.41
LMBR1L-212ENST00000549587 ERICH3Q5RHP9 1530 aa17.63■□□□□ 0.41
LMBR1L-212ENST00000549587 KIF13AQ9H1H9 1805 aa17.54■□□□□ 0.4
LMBR1L-212ENST00000549587 ILDR1Q86SU0 546 aaPredicted RBP17.52■□□□□ 0.4
LMBR1L-212ENST00000549587 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms