RNA–Protein interactions for RNA: ENST00000549564.1

PMEL-213, Transcript of premelanosome protein, humanhuman

TSL 5

Gene PMEL, Length 503 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-213ENST00000549564 NISCHQ9Y2I1 1504 aa31.77■■■□□ 2.68
PMEL-213ENST00000549564 ABCC9O60706 1549 aa28.69■■■□□ 2.18
PMEL-213ENST00000549564 CCDC180Q9P1Z9 1646 aa28.38■■■□□ 2.13
PMEL-213ENST00000549564 DNAJC5BQ9UF47 199 aa27.26■■□□□ 1.95
PMEL-213ENST00000549564 RB1CC1Q8TDY2 1594 aa27.16■■□□□ 1.94
PMEL-213ENST00000549564 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
PMEL-213ENST00000549564 NACADO15069 1562 aa26.98■■□□□ 1.91
PMEL-213ENST00000549564 PABPN1Q86U42 306 aaKnown RBP eCLIP26.83■■□□□ 1.89
PMEL-213ENST00000549564 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
PMEL-213ENST00000549564 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.83
PMEL-213ENST00000549564 BICRAQ9NZM4 1560 aa26.45■■□□□ 1.82
PMEL-213ENST00000549564 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
PMEL-213ENST00000549564 DCAF1Q9Y4B6 1507 aa26.2■■□□□ 1.79
PMEL-213ENST00000549564 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
PMEL-213ENST00000549564 SCRIBQ14160 1630 aa25.91■■□□□ 1.74
PMEL-213ENST00000549564 CECR2Q9BXF3 1484 aa25.86■■□□□ 1.73
PMEL-213ENST00000549564 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
PMEL-213ENST00000549564 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
PMEL-213ENST00000549564 DNAJC5Q9H3Z4 198 aa25.08■■□□□ 1.61
PMEL-213ENST00000549564 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
PMEL-213ENST00000549564 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.58
PMEL-213ENST00000549564 CUX2O14529 1486 aa24.74■■□□□ 1.55
PMEL-213ENST00000549564 ERCC6Q03468 1493 aa24.72■■□□□ 1.55
PMEL-213ENST00000549564 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
PMEL-213ENST00000549564 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
PMEL-213ENST00000549564 HMGXB3Q12766 1538 aa24.68■■□□□ 1.54
PMEL-213ENST00000549564 NESP48681 1621 aa24.64■■□□□ 1.53
PMEL-213ENST00000549564 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
PMEL-213ENST00000549564 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
PMEL-213ENST00000549564 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
PMEL-213ENST00000549564 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
PMEL-213ENST00000549564 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
PMEL-213ENST00000549564 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
PMEL-213ENST00000549564 THOC2Q8NI27 1593 aaKnown RBP24.28■■□□□ 1.48
PMEL-213ENST00000549564 CADPSQ9ULU8 1353 aa24.27■■□□□ 1.48
PMEL-213ENST00000549564 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
PMEL-213ENST00000549564 WIZO95785 1651 aa24.11■■□□□ 1.45
PMEL-213ENST00000549564 MRC2Q9UBG0 1479 aa24.04■■□□□ 1.44
PMEL-213ENST00000549564 RSF1Q96T23 1441 aaPredicted RBP24■■□□□ 1.43
PMEL-213ENST00000549564 WDR62O43379 1518 aa23.95■■□□□ 1.43
PMEL-213ENST00000549564 CFTRP13569 1480 aa23.92■■□□□ 1.42
PMEL-213ENST00000549564 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
PMEL-213ENST00000549564 CEP164Q9UPV0 1460 aa23.9■■□□□ 1.42
PMEL-213ENST00000549564 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
PMEL-213ENST00000549564 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
PMEL-213ENST00000549564 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
PMEL-213ENST00000549564 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
PMEL-213ENST00000549564 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
PMEL-213ENST00000549564 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
PMEL-213ENST00000549564 IFT140Q96RY7 1462 aa23.47■■□□□ 1.35
PMEL-213ENST00000549564 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
PMEL-213ENST00000549564 PRDM2Q13029 1718 aa23.39■■□□□ 1.33
PMEL-213ENST00000549564 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
PMEL-213ENST00000549564 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.32
PMEL-213ENST00000549564 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
PMEL-213ENST00000549564 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
PMEL-213ENST00000549564 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
PMEL-213ENST00000549564 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
PMEL-213ENST00000549564 ARHGEF11O15085 1522 aa23.22■■□□□ 1.31
PMEL-213ENST00000549564 CYB5RLQ6IPT4 315 aa23.21■■□□□ 1.31
PMEL-213ENST00000549564 TARBP1Q13395 1621 aaKnown RBP23.2■■□□□ 1.3
PMEL-213ENST00000549564 POLA1P09884 1462 aaPredicted RBP23.2■■□□□ 1.3
PMEL-213ENST00000549564 EIF4G3O43432 1585 aaKnown RBP23.19■■□□□ 1.3
PMEL-213ENST00000549564 FBLN2P98095 1184 aa23.18■■□□□ 1.3
PMEL-213ENST00000549564 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
PMEL-213ENST00000549564 SOGA1O94964 1423 aa23.16■■□□□ 1.3
PMEL-213ENST00000549564 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
PMEL-213ENST00000549564 CHD1O14646 1710 aa23.02■■□□□ 1.28
PMEL-213ENST00000549564 FGD5Q6ZNL6 1462 aa23.02■■□□□ 1.28
PMEL-213ENST00000549564 ARAP1Q96P48 1450 aa23.01■■□□□ 1.27
PMEL-213ENST00000549564 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
PMEL-213ENST00000549564 CUX1P39880 1505 aa22.99■■□□□ 1.27
PMEL-213ENST00000549564 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
PMEL-213ENST00000549564 TRHP20396 242 aaPredicted RBP22.94■■□□□ 1.26
PMEL-213ENST00000549564 GRIN2BQ13224 1484 aa22.91■■□□□ 1.26
PMEL-213ENST00000549564 MAGI1Q96QZ7 1491 aaPredicted RBP22.88■■□□□ 1.25
PMEL-213ENST00000549564 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
PMEL-213ENST00000549564 WDR97A6NE52 1622 aa22.88■■□□□ 1.25
PMEL-213ENST00000549564 CLASP1Q7Z460 1538 aa22.85■■□□□ 1.25
PMEL-213ENST00000549564 SYNJ2O15056 1496 aa22.83■■□□□ 1.25
PMEL-213ENST00000549564 GAPVD1Q14C86 1478 aa22.82■■□□□ 1.24
PMEL-213ENST00000549564 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
PMEL-213ENST00000549564 ABCA10Q8WWZ4 1543 aa22.77■■□□□ 1.24
PMEL-213ENST00000549564 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
PMEL-213ENST00000549564 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.22
PMEL-213ENST00000549564 PBRM1Q86U86 1689 aa22.63■■□□□ 1.21
PMEL-213ENST00000549564 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
PMEL-213ENST00000549564 NUP160Q12769 1436 aa22.57■■□□□ 1.2
PMEL-213ENST00000549564 FHAD1B1AJZ9 1412 aa22.54■■□□□ 1.2
PMEL-213ENST00000549564 ERCC6L2Q5T890 1561 aa22.54■■□□□ 1.2
PMEL-213ENST00000549564 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
PMEL-213ENST00000549564 CEP170Q5SW79 1584 aa22.49■■□□□ 1.19
PMEL-213ENST00000549564 BIVM-ERCC5R4GMW8 1640 aa22.49■■□□□ 1.19
PMEL-213ENST00000549564 ADAMTS12P58397 1594 aa22.47■■□□□ 1.19
PMEL-213ENST00000549564 JPH4Q96JJ6 628 aa22.46■■□□□ 1.19
PMEL-213ENST00000549564 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
PMEL-213ENST00000549564 PRG4Q92954 1404 aaPredicted RBP22.38■■□□□ 1.17
PMEL-213ENST00000549564 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
PMEL-213ENST00000549564 AEBP2Q6ZN18 517 aaPredicted RBP22.34■■□□□ 1.17
PMEL-213ENST00000549564 IGF1RP08069 1367 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms