RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 NISCHQ9Y2I1 1504 aa39.35■■■■□ 3.89
TCHP-208ENST00000549550 ABCC9O60706 1549 aa35.83■■■■□ 3.33
TCHP-208ENST00000549550 CCDC180Q9P1Z9 1646 aa35.54■■■■□ 3.28
TCHP-208ENST00000549550 RB1CC1Q8TDY2 1594 aa33.97■■■■□ 3.03
TCHP-208ENST00000549550 DNAJC5BQ9UF47 199 aa33.9■■■■□ 3.02
TCHP-208ENST00000549550 NACADO15069 1562 aa33.63■■■□□ 2.97
TCHP-208ENST00000549550 DCAF8L2P0C7V8 631 aa33.33■■■□□ 2.93
TCHP-208ENST00000549550 UNC13AQ9UPW8 1703 aa33.33■■■□□ 2.93
TCHP-208ENST00000549550 PABPN1Q86U42 306 aaKnown RBP eCLIP33.27■■■□□ 2.92
TCHP-208ENST00000549550 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
TCHP-208ENST00000549550 BICRAQ9NZM4 1560 aa33.01■■■□□ 2.88
TCHP-208ENST00000549550 ZCCHC6Q5VYS8 1495 aaKnown RBP32.54■■■□□ 2.8
TCHP-208ENST00000549550 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
TCHP-208ENST00000549550 DCAF1Q9Y4B6 1507 aa32.47■■■□□ 2.79
TCHP-208ENST00000549550 CC2D2AQ9P2K1 1620 aa32.39■■■□□ 2.78
TCHP-208ENST00000549550 SCRIBQ14160 1630 aa32.35■■■□□ 2.77
TCHP-208ENST00000549550 CECR2Q9BXF3 1484 aa32.31■■■□□ 2.76
TCHP-208ENST00000549550 EIF4G1Q04637 1599 aaKnown RBP32.22■■■□□ 2.75
TCHP-208ENST00000549550 DNAJC5Q9H3Z4 198 aa31.38■■■□□ 2.61
TCHP-208ENST00000549550 CUX2O14529 1486 aa31.02■■■□□ 2.56
TCHP-208ENST00000549550 NCAPD3P42695 1498 aa31.01■■■□□ 2.56
TCHP-208ENST00000549550 ERCC6Q03468 1493 aa30.96■■■□□ 2.55
TCHP-208ENST00000549550 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.53
TCHP-208ENST00000549550 SMARCA4P51532 1647 aa30.81■■■□□ 2.52
TCHP-208ENST00000549550 SMARCA2P51531 1590 aa30.8■■■□□ 2.52
TCHP-208ENST00000549550 HMGXB3Q12766 1538 aa30.79■■■□□ 2.52
TCHP-208ENST00000549550 NESP48681 1621 aa30.69■■■□□ 2.5
TCHP-208ENST00000549550 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
TCHP-208ENST00000549550 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
TCHP-208ENST00000549550 THOC2Q8NI27 1593 aaKnown RBP30.49■■■□□ 2.47
TCHP-208ENST00000549550 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
TCHP-208ENST00000549550 LAMC3Q9Y6N6 1575 aa30.43■■■□□ 2.46
TCHP-208ENST00000549550 KIF21AQ7Z4S6 1674 aa30.36■■■□□ 2.45
TCHP-208ENST00000549550 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.45
TCHP-208ENST00000549550 PDS5BQ9NTI5 1447 aa30.22■■■□□ 2.43
TCHP-208ENST00000549550 CADPSQ9ULU8 1353 aa30.04■■■□□ 2.4
TCHP-208ENST00000549550 MRC2Q9UBG0 1479 aa30■■■□□ 2.39
TCHP-208ENST00000549550 WIZO95785 1651 aa29.99■■■□□ 2.39
TCHP-208ENST00000549550 WDR62O43379 1518 aa29.96■■■□□ 2.39
TCHP-208ENST00000549550 TRIM41Q8WV44 630 aa29.88■■■□□ 2.37
TCHP-208ENST00000549550 CEP164Q9UPV0 1460 aa29.82■■■□□ 2.36
TCHP-208ENST00000549550 FANCD2Q9BXW9 1451 aa29.74■■■□□ 2.35
TCHP-208ENST00000549550 CFTRP13569 1480 aa29.65■■■□□ 2.34
TCHP-208ENST00000549550 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
TCHP-208ENST00000549550 URB2Q14146 1524 aaKnown RBP29.53■■■□□ 2.32
TCHP-208ENST00000549550 RSF1Q96T23 1441 aaPredicted RBP29.53■■■□□ 2.32
TCHP-208ENST00000549550 OSCARQ8IYS5 282 aa29.5■■■□□ 2.31
TCHP-208ENST00000549550 PRDM2Q13029 1718 aa29.48■■■□□ 2.31
TCHP-208ENST00000549550 RIMBP3CA6NJZ7 1639 aa29.27■■■□□ 2.28
TCHP-208ENST00000549550 RIMBP3BA6NNM3 1639 aa29.27■■■□□ 2.28
TCHP-208ENST00000549550 RIMBP3Q9UFD9 1639 aa29.27■■■□□ 2.28
TCHP-208ENST00000549550 ZNF608Q9ULD9 1512 aaPredicted RBP29.22■■■□□ 2.27
TCHP-208ENST00000549550 IFT140Q96RY7 1462 aa29.21■■■□□ 2.27
TCHP-208ENST00000549550 CCDC88BA6NC98 1476 aa29.19■■■□□ 2.26
TCHP-208ENST00000549550 TOPBP1Q92547 1522 aa29.15■■■□□ 2.26
TCHP-208ENST00000549550 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
TCHP-208ENST00000549550 EIF4G3O43432 1585 aaKnown RBP29.09■■■□□ 2.25
TCHP-208ENST00000549550 ABCC8Q09428 1581 aa29.03■■■□□ 2.24
TCHP-208ENST00000549550 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
TCHP-208ENST00000549550 CHD1O14646 1710 aa29■■■□□ 2.23
TCHP-208ENST00000549550 TARBP1Q13395 1621 aaKnown RBP28.95■■■□□ 2.23
TCHP-208ENST00000549550 AQRO60306 1485 aaKnown RBP eCLIP28.9■■■□□ 2.22
TCHP-208ENST00000549550 CYB5RLQ6IPT4 315 aa28.86■■■□□ 2.21
TCHP-208ENST00000549550 POLA1P09884 1462 aaPredicted RBP28.82■■■□□ 2.2
TCHP-208ENST00000549550 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
TCHP-208ENST00000549550 FBLN2P98095 1184 aa28.76■■■□□ 2.19
TCHP-208ENST00000549550 RAD54L2Q9Y4B4 1467 aa28.72■■■□□ 2.19
TCHP-208ENST00000549550 TRHP20396 242 aaPredicted RBP28.66■■■□□ 2.18
TCHP-208ENST00000549550 SOGA1O94964 1423 aa28.66■■■□□ 2.18
TCHP-208ENST00000549550 TDRD9Q8NDG6 1382 aaKnown RBP28.65■■■□□ 2.18
TCHP-208ENST00000549550 SNAPC4Q5SXM2 1469 aa28.61■■■□□ 2.17
TCHP-208ENST00000549550 WDR97A6NE52 1622 aa28.61■■■□□ 2.17
TCHP-208ENST00000549550 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
TCHP-208ENST00000549550 CLASP1Q7Z460 1538 aa28.58■■■□□ 2.17
TCHP-208ENST00000549550 SYNJ1O43426 1573 aa28.53■■■□□ 2.16
TCHP-208ENST00000549550 CUX1P39880 1505 aa28.53■■■□□ 2.16
TCHP-208ENST00000549550 MAGI1Q96QZ7 1491 aaPredicted RBP28.51■■■□□ 2.15
TCHP-208ENST00000549550 CHMP7Q8WUX9 453 aaPredicted RBP28.48■■■□□ 2.15
TCHP-208ENST00000549550 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
TCHP-208ENST00000549550 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
TCHP-208ENST00000549550 SYNJ2O15056 1496 aa28.42■■■□□ 2.14
TCHP-208ENST00000549550 GAPVD1Q14C86 1478 aa28.32■■■□□ 2.12
TCHP-208ENST00000549550 ABCA5Q8WWZ7 1642 aa28.28■■■□□ 2.12
TCHP-208ENST00000549550 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
TCHP-208ENST00000549550 ERCC6L2Q5T890 1561 aa28.12■■■□□ 2.09
TCHP-208ENST00000549550 GRIN2AQ12879 1464 aa28.11■■■□□ 2.09
TCHP-208ENST00000549550 AEBP2Q6ZN18 517 aaPredicted RBP28.09■■■□□ 2.09
TCHP-208ENST00000549550 ADAMTS12P58397 1594 aa28.08■■■□□ 2.09
TCHP-208ENST00000549550 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
TCHP-208ENST00000549550 WRNQ14191 1432 aaPredicted RBP eCLIP28.03■■■□□ 2.08
TCHP-208ENST00000549550 NUP160Q12769 1436 aa28.01■■■□□ 2.08
TCHP-208ENST00000549550 BIVM-ERCC5R4GMW8 1640 aa28.01■■■□□ 2.07
TCHP-208ENST00000549550 SHROOM2Q13796 1616 aa28■■■□□ 2.07
TCHP-208ENST00000549550 TOP2BQ02880 1626 aa27.98■■■□□ 2.07
TCHP-208ENST00000549550 SUPT5HO00267 1087 aaKnown RBP27.94■■■□□ 2.06
TCHP-208ENST00000549550 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
TCHP-208ENST00000549550 ERICH3Q5RHP9 1530 aa27.88■■■□□ 2.05
TCHP-208ENST00000549550 KIF13AQ9H1H9 1805 aa27.88■■■□□ 2.05
TCHP-208ENST00000549550 PRG4Q92954 1404 aaPredicted RBP27.77■■■□□ 2.04
TCHP-208ENST00000549550 RUSC2Q8N2Y8 1516 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms