RNA–Protein interactions for RNA: ENST00000549407.1

ZFC3H1-207, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 3

Gene ZFC3H1, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-207ENST00000549407 NISCHQ9Y2I1 1504 aa46.41■■■■■ 5.02
ZFC3H1-207ENST00000549407 ABCC9O60706 1549 aa42.58■■■■■ 4.41
ZFC3H1-207ENST00000549407 CCDC180Q9P1Z9 1646 aa41.78■■■■■ 4.28
ZFC3H1-207ENST00000549407 DNAJC5BQ9UF47 199 aa40.6■■■■■ 4.09
ZFC3H1-207ENST00000549407 RB1CC1Q8TDY2 1594 aa40.18■■■■■ 4.02
ZFC3H1-207ENST00000549407 NACADO15069 1562 aa39.76■■■■□ 3.95
ZFC3H1-207ENST00000549407 DCAF8L2P0C7V8 631 aa39.68■■■■□ 3.94
ZFC3H1-207ENST00000549407 PABPN1Q86U42 306 aaKnown RBP eCLIP39.65■■■■□ 3.94
ZFC3H1-207ENST00000549407 UNC13AQ9UPW8 1703 aa39.11■■■■□ 3.85
ZFC3H1-207ENST00000549407 BICRAQ9NZM4 1560 aa39.01■■■■□ 3.84
ZFC3H1-207ENST00000549407 MYO15BQ96JP2 1530 aa38.99■■■■□ 3.83
ZFC3H1-207ENST00000549407 CECR2Q9BXF3 1484 aa38.41■■■■□ 3.74
ZFC3H1-207ENST00000549407 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
ZFC3H1-207ENST00000549407 CC2D2AQ9P2K1 1620 aa38.35■■■■□ 3.73
ZFC3H1-207ENST00000549407 ZCCHC6Q5VYS8 1495 aaKnown RBP38.29■■■■□ 3.72
ZFC3H1-207ENST00000549407 DCAF1Q9Y4B6 1507 aa38.26■■■■□ 3.72
ZFC3H1-207ENST00000549407 EIF4G1Q04637 1599 aaKnown RBP38.12■■■■□ 3.69
ZFC3H1-207ENST00000549407 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
ZFC3H1-207ENST00000549407 DNAJC5Q9H3Z4 198 aa37.75■■■■□ 3.63
ZFC3H1-207ENST00000549407 CUX2O14529 1486 aa36.92■■■■□ 3.5
ZFC3H1-207ENST00000549407 ERCC6Q03468 1493 aa36.82■■■■□ 3.48
ZFC3H1-207ENST00000549407 NCAPD3P42695 1498 aa36.77■■■■□ 3.48
ZFC3H1-207ENST00000549407 ATAD2BQ9ULI0 1458 aa36.56■■■■□ 3.44
ZFC3H1-207ENST00000549407 NESP48681 1621 aa36.38■■■■□ 3.41
ZFC3H1-207ENST00000549407 SMARCA2P51531 1590 aa36.38■■■■□ 3.41
ZFC3H1-207ENST00000549407 HMGXB3Q12766 1538 aa36.34■■■■□ 3.41
ZFC3H1-207ENST00000549407 SMARCA4P51532 1647 aa36.28■■■■□ 3.4
ZFC3H1-207ENST00000549407 BAZ1BQ9UIG0 1483 aaKnown RBP36.17■■■■□ 3.38
ZFC3H1-207ENST00000549407 BAZ1AQ9NRL2 1556 aaPredicted RBP36.05■■■■□ 3.36
ZFC3H1-207ENST00000549407 THOC2Q8NI27 1593 aaKnown RBP36.02■■■■□ 3.36
ZFC3H1-207ENST00000549407 LAMC3Q9Y6N6 1575 aa35.98■■■■□ 3.35
ZFC3H1-207ENST00000549407 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
ZFC3H1-207ENST00000549407 PDS5BQ9NTI5 1447 aa35.88■■■■□ 3.33
ZFC3H1-207ENST00000549407 TRIM41Q8WV44 630 aa35.86■■■■□ 3.33
ZFC3H1-207ENST00000549407 MROH2BQ7Z745 1585 aa35.76■■■■□ 3.32
ZFC3H1-207ENST00000549407 KIF21AQ7Z4S6 1674 aa35.76■■■■□ 3.32
ZFC3H1-207ENST00000549407 CADPSQ9ULU8 1353 aa35.66■■■■□ 3.3
ZFC3H1-207ENST00000549407 MRC2Q9UBG0 1479 aa35.55■■■■□ 3.28
ZFC3H1-207ENST00000549407 WDR62O43379 1518 aa35.44■■■■□ 3.26
ZFC3H1-207ENST00000549407 CEP164Q9UPV0 1460 aa35.29■■■■□ 3.24
ZFC3H1-207ENST00000549407 OSCARQ8IYS5 282 aa35.29■■■■□ 3.24
ZFC3H1-207ENST00000549407 WIZO95785 1651 aa35.26■■■■□ 3.23
ZFC3H1-207ENST00000549407 FANCD2Q9BXW9 1451 aa35.22■■■■□ 3.23
ZFC3H1-207ENST00000549407 CFTRP13569 1480 aa35.08■■■■□ 3.21
ZFC3H1-207ENST00000549407 URB2Q14146 1524 aaKnown RBP34.95■■■■□ 3.19
ZFC3H1-207ENST00000549407 RSF1Q96T23 1441 aaPredicted RBP34.84■■■■□ 3.17
ZFC3H1-207ENST00000549407 TOP2AP11388 1531 aaKnown RBP34.77■■■■□ 3.16
ZFC3H1-207ENST00000549407 RIMBP3CA6NJZ7 1639 aa34.7■■■■□ 3.14
ZFC3H1-207ENST00000549407 RIMBP3BA6NNM3 1639 aa34.7■■■■□ 3.14
ZFC3H1-207ENST00000549407 RIMBP3Q9UFD9 1639 aa34.7■■■■□ 3.14
ZFC3H1-207ENST00000549407 ZNF608Q9ULD9 1512 aaPredicted RBP34.63■■■■□ 3.13
ZFC3H1-207ENST00000549407 IFT140Q96RY7 1462 aa34.63■■■■□ 3.13
ZFC3H1-207ENST00000549407 ARHGEF11O15085 1522 aa34.56■■■■□ 3.12
ZFC3H1-207ENST00000549407 CYB5RLQ6IPT4 315 aa34.51■■■■□ 3.12
ZFC3H1-207ENST00000549407 CCDC88BA6NC98 1476 aa34.46■■■■□ 3.11
ZFC3H1-207ENST00000549407 TOPBP1Q92547 1522 aa34.45■■■■□ 3.11
ZFC3H1-207ENST00000549407 PRDM2Q13029 1718 aa34.44■■■■□ 3.1
ZFC3H1-207ENST00000549407 ABCC8Q09428 1581 aa34.36■■■■□ 3.09
ZFC3H1-207ENST00000549407 TRHP20396 242 aaPredicted RBP34.36■■■■□ 3.09
ZFC3H1-207ENST00000549407 EIF4G3O43432 1585 aaKnown RBP34.32■■■■□ 3.08
ZFC3H1-207ENST00000549407 AQRO60306 1485 aaKnown RBP eCLIP34.29■■■■□ 3.088e-7■■■□□ 16.1
ZFC3H1-207ENST00000549407 FBLN2P98095 1184 aa34.29■■■■□ 3.08
ZFC3H1-207ENST00000549407 DNMBPQ6XZF7 1577 aa34.23■■■■□ 3.07
ZFC3H1-207ENST00000549407 ARAP1Q96P48 1450 aa34.19■■■■□ 3.06
ZFC3H1-207ENST00000549407 TARBP1Q13395 1621 aaKnown RBP34.14■■■■□ 3.06
ZFC3H1-207ENST00000549407 CHD1O14646 1710 aa34.13■■■■□ 3.05
ZFC3H1-207ENST00000549407 POLA1P09884 1462 aaPredicted RBP34.07■■■■□ 3.04
ZFC3H1-207ENST00000549407 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.04
ZFC3H1-207ENST00000549407 RAD54L2Q9Y4B4 1467 aa34■■■■□ 3.03
ZFC3H1-207ENST00000549407 SOGA1O94964 1423 aa33.99■■■■□ 3.03
ZFC3H1-207ENST00000549407 CHMP7Q8WUX9 453 aaPredicted RBP33.93■■■■□ 3.02
ZFC3H1-207ENST00000549407 SNAPC4Q5SXM2 1469 aa33.87■■■■□ 3.01
ZFC3H1-207ENST00000549407 AEBP2Q6ZN18 517 aaPredicted RBP33.82■■■■□ 3
ZFC3H1-207ENST00000549407 CLASP1Q7Z460 1538 aa33.79■■■■□ 3
ZFC3H1-207ENST00000549407 FGD5Q6ZNL6 1462 aa33.77■■■■□ 3
ZFC3H1-207ENST00000549407 SYNJ1O43426 1573 aa33.74■■■□□ 2.99
ZFC3H1-207ENST00000549407 MAGI1Q96QZ7 1491 aaPredicted RBP33.74■■■□□ 2.99
ZFC3H1-207ENST00000549407 WDR97A6NE52 1622 aa33.71■■■□□ 2.99
ZFC3H1-207ENST00000549407 GRIN2BQ13224 1484 aa33.71■■■□□ 2.99
ZFC3H1-207ENST00000549407 SYNJ2O15056 1496 aa33.66■■■□□ 2.98
ZFC3H1-207ENST00000549407 CUX1P39880 1505 aa33.62■■■□□ 2.97
ZFC3H1-207ENST00000549407 GAPVD1Q14C86 1478 aa33.56■■■□□ 2.96
ZFC3H1-207ENST00000549407 PBRM1Q86U86 1689 aa33.37■■■□□ 2.93
ZFC3H1-207ENST00000549407 ABCA10Q8WWZ4 1543 aa33.34■■■□□ 2.93
ZFC3H1-207ENST00000549407 ABCA5Q8WWZ7 1642 aa33.27■■■□□ 2.92
ZFC3H1-207ENST00000549407 ERCC6L2Q5T890 1561 aa33.26■■■□□ 2.91
ZFC3H1-207ENST00000549407 GRIN2AQ12879 1464 aa33.25■■■□□ 2.91
ZFC3H1-207ENST00000549407 NUP160Q12769 1436 aa33.17■■■□□ 2.9
ZFC3H1-207ENST00000549407 WRNQ14191 1432 aaPredicted RBP eCLIP33.15■■■□□ 2.9
ZFC3H1-207ENST00000549407 CEP170Q5SW79 1584 aa33.15■■■□□ 2.9
ZFC3H1-207ENST00000549407 FHAD1B1AJZ9 1412 aa33.07■■■□□ 2.88
ZFC3H1-207ENST00000549407 ADAMTS12P58397 1594 aa33.07■■■□□ 2.88
ZFC3H1-207ENST00000549407 SHROOM2Q13796 1616 aa33■■■□□ 2.87
ZFC3H1-207ENST00000549407 SUPT5HO00267 1087 aaKnown RBP32.97■■■□□ 2.87
ZFC3H1-207ENST00000549407 PRG4Q92954 1404 aaPredicted RBP32.96■■■□□ 2.87
ZFC3H1-207ENST00000549407 JPH4Q96JJ6 628 aa32.96■■■□□ 2.87
ZFC3H1-207ENST00000549407 ERICH3Q5RHP9 1530 aa32.89■■■□□ 2.86
ZFC3H1-207ENST00000549407 FAM69CQ0P6D2 419 aa32.89■■■□□ 2.86
ZFC3H1-207ENST00000549407 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
ZFC3H1-207ENST00000549407 NPM1P06748 294 aaKnown RBP eCLIP32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms