RNA–Protein interactions for RNA: ENST00000549398.5

C12orf54-205, Transcript of chromosome 12 open reading frame 54, humanhuman

TSL 5

Gene C12orf54, Length 506 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-205ENST00000549398 NISCHQ9Y2I1 1504 aa22.65■■□□□ 1.22
C12orf54-205ENST00000549398 ABCC9O60706 1549 aa20.9■□□□□ 0.94
C12orf54-205ENST00000549398 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
C12orf54-205ENST00000549398 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
C12orf54-205ENST00000549398 RB1CC1Q8TDY2 1594 aa19.71■□□□□ 0.75
C12orf54-205ENST00000549398 NACADO15069 1562 aa19.49■□□□□ 0.71
C12orf54-205ENST00000549398 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
C12orf54-205ENST00000549398 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
C12orf54-205ENST00000549398 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
C12orf54-205ENST00000549398 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
C12orf54-205ENST00000549398 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
C12orf54-205ENST00000549398 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.62
C12orf54-205ENST00000549398 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
C12orf54-205ENST00000549398 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
C12orf54-205ENST00000549398 DNAJC5Q9H3Z4 198 aa18.76■□□□□ 0.59
C12orf54-205ENST00000549398 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
C12orf54-205ENST00000549398 DCAF1Q9Y4B6 1507 aa18.7■□□□□ 0.58
C12orf54-205ENST00000549398 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
C12orf54-205ENST00000549398 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
C12orf54-205ENST00000549398 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
C12orf54-205ENST00000549398 CUX2O14529 1486 aa18.2■□□□□ 0.5
C12orf54-205ENST00000549398 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
C12orf54-205ENST00000549398 ERCC6Q03468 1493 aa18.03■□□□□ 0.48
C12orf54-205ENST00000549398 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
C12orf54-205ENST00000549398 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
C12orf54-205ENST00000549398 NESP48681 1621 aa17.86■□□□□ 0.45
C12orf54-205ENST00000549398 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
C12orf54-205ENST00000549398 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
C12orf54-205ENST00000549398 THOC2Q8NI27 1593 aaKnown RBP17.75■□□□□ 0.43
C12orf54-205ENST00000549398 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
C12orf54-205ENST00000549398 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
C12orf54-205ENST00000549398 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
C12orf54-205ENST00000549398 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
C12orf54-205ENST00000549398 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
C12orf54-205ENST00000549398 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
C12orf54-205ENST00000549398 BAZ1AQ9NRL2 1556 aaPredicted RBP17.59■□□□□ 0.41
C12orf54-205ENST00000549398 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
C12orf54-205ENST00000549398 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
C12orf54-205ENST00000549398 CADPSQ9ULU8 1353 aa17.44■□□□□ 0.38
C12orf54-205ENST00000549398 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
C12orf54-205ENST00000549398 WDR62O43379 1518 aa17.42■□□□□ 0.38
C12orf54-205ENST00000549398 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
C12orf54-205ENST00000549398 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
C12orf54-205ENST00000549398 WIZO95785 1651 aa17.23■□□□□ 0.35
C12orf54-205ENST00000549398 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
C12orf54-205ENST00000549398 CFTRP13569 1480 aa17.15■□□□□ 0.34
C12orf54-205ENST00000549398 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
C12orf54-205ENST00000549398 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
C12orf54-205ENST00000549398 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
C12orf54-205ENST00000549398 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
C12orf54-205ENST00000549398 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
C12orf54-205ENST00000549398 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
C12orf54-205ENST00000549398 CYB5RLQ6IPT4 315 aa16.95■□□□□ 0.3
C12orf54-205ENST00000549398 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
C12orf54-205ENST00000549398 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
C12orf54-205ENST00000549398 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
C12orf54-205ENST00000549398 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
C12orf54-205ENST00000549398 TRHP20396 242 aaPredicted RBP16.86■□□□□ 0.29
C12orf54-205ENST00000549398 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
C12orf54-205ENST00000549398 EIF4G3O43432 1585 aaKnown RBP16.84■□□□□ 0.29
C12orf54-205ENST00000549398 CHD1O14646 1710 aa16.82■□□□□ 0.28
C12orf54-205ENST00000549398 ARAP1Q96P48 1450 aa16.82■□□□□ 0.28
C12orf54-205ENST00000549398 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
C12orf54-205ENST00000549398 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
C12orf54-205ENST00000549398 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.28
C12orf54-205ENST00000549398 TARBP1Q13395 1621 aaKnown RBP16.77■□□□□ 0.27
C12orf54-205ENST00000549398 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
C12orf54-205ENST00000549398 FBLN2P98095 1184 aa16.71■□□□□ 0.27
C12orf54-205ENST00000549398 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
C12orf54-205ENST00000549398 CLASP1Q7Z460 1538 aa16.62■□□□□ 0.25
C12orf54-205ENST00000549398 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
C12orf54-205ENST00000549398 RAD54L2Q9Y4B4 1467 aa16.6■□□□□ 0.25
C12orf54-205ENST00000549398 SOGA1O94964 1423 aa16.58■□□□□ 0.24
C12orf54-205ENST00000549398 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
C12orf54-205ENST00000549398 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
C12orf54-205ENST00000549398 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
C12orf54-205ENST00000549398 SYNJ1O43426 1573 aa16.53■□□□□ 0.24
C12orf54-205ENST00000549398 MAGI1Q96QZ7 1491 aaPredicted RBP16.5■□□□□ 0.23
C12orf54-205ENST00000549398 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
C12orf54-205ENST00000549398 SYNJ2O15056 1496 aa16.46■□□□□ 0.23
C12orf54-205ENST00000549398 GRIN2BQ13224 1484 aa16.46■□□□□ 0.23
C12orf54-205ENST00000549398 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
C12orf54-205ENST00000549398 CUX1P39880 1505 aa16.4■□□□□ 0.22
C12orf54-205ENST00000549398 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
C12orf54-205ENST00000549398 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
C12orf54-205ENST00000549398 ABCA5Q8WWZ7 1642 aa16.29■□□□□ 0.2
C12orf54-205ENST00000549398 KIF13AQ9H1H9 1805 aa16.27■□□□□ 0.2
C12orf54-205ENST00000549398 ABCA10Q8WWZ4 1543 aa16.27■□□□□ 0.2
C12orf54-205ENST00000549398 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
C12orf54-205ENST00000549398 GRIN2AQ12879 1464 aa16.25■□□□□ 0.19
C12orf54-205ENST00000549398 NUP160Q12769 1436 aa16.23■□□□□ 0.19
C12orf54-205ENST00000549398 SHROOM2Q13796 1616 aa16.23■□□□□ 0.19
C12orf54-205ENST00000549398 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
C12orf54-205ENST00000549398 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
C12orf54-205ENST00000549398 KDM4FA0A1W2PPD8 638 aa16.11■□□□□ 0.17
C12orf54-205ENST00000549398 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
C12orf54-205ENST00000549398 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
C12orf54-205ENST00000549398 FAM69CQ0P6D2 419 aa16.1■□□□□ 0.17
C12orf54-205ENST00000549398 JPH4Q96JJ6 628 aa16.1■□□□□ 0.17
C12orf54-205ENST00000549398 PRG4Q92954 1404 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms