RNA–Protein interactions for RNA: ENST00000549366.5

PFKM-216, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-216ENST00000549366 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
PFKM-216ENST00000549366 CCDC180Q9P1Z9 1646 aa16.8■□□□□ 0.28
PFKM-216ENST00000549366 ABCC9O60706 1549 aa16.2■□□□□ 0.18
PFKM-216ENST00000549366 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
PFKM-216ENST00000549366 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
PFKM-216ENST00000549366 NACADO15069 1562 aa15.7■□□□□ 0.1
PFKM-216ENST00000549366 ZCCHC6Q5VYS8 1495 aaKnown RBP15.7■□□□□ 0.1
PFKM-216ENST00000549366 MYO15BQ96JP2 1530 aa15.64■□□□□ 0.09
PFKM-216ENST00000549366 DCAF1Q9Y4B6 1507 aa15.59■□□□□ 0.09
PFKM-216ENST00000549366 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
PFKM-216ENST00000549366 UNC13AQ9UPW8 1703 aa15.39■□□□□ 0.05
PFKM-216ENST00000549366 SCRIBQ14160 1630 aa15.25■□□□□ 0.03
PFKM-216ENST00000549366 BICRAQ9NZM4 1560 aa15.16■□□□□ 0.02
PFKM-216ENST00000549366 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
PFKM-216ENST00000549366 CHIC1Q5VXU3 224 aa15.07■□□□□ 0
PFKM-216ENST00000549366 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
PFKM-216ENST00000549366 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
PFKM-216ENST00000549366 CC2D2AQ9P2K1 1620 aa14.71□□□□□ -0.05
PFKM-216ENST00000549366 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
PFKM-216ENST00000549366 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
PFKM-216ENST00000549366 SMARCA4P51532 1647 aa14.6□□□□□ -0.07
PFKM-216ENST00000549366 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
PFKM-216ENST00000549366 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
PFKM-216ENST00000549366 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
PFKM-216ENST00000549366 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
PFKM-216ENST00000549366 MROH2BQ7Z745 1585 aa14.44□□□□□ -0.1
PFKM-216ENST00000549366 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
PFKM-216ENST00000549366 NCAPD3P42695 1498 aa14.42□□□□□ -0.1
PFKM-216ENST00000549366 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
PFKM-216ENST00000549366 WIZO95785 1651 aa14.33□□□□□ -0.11
PFKM-216ENST00000549366 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
PFKM-216ENST00000549366 TOP2AP11388 1531 aaKnown RBP14.22□□□□□ -0.13
PFKM-216ENST00000549366 LAMC3Q9Y6N6 1575 aa14.12□□□□□ -0.15
PFKM-216ENST00000549366 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
PFKM-216ENST00000549366 NESP48681 1621 aa14.02□□□□□ -0.16
PFKM-216ENST00000549366 ERCC6Q03468 1493 aa14.02□□□□□ -0.16
PFKM-216ENST00000549366 CADPSQ9ULU8 1353 aa13.98□□□□□ -0.17
PFKM-216ENST00000549366 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
PFKM-216ENST00000549366 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
PFKM-216ENST00000549366 CCDC88BA6NC98 1476 aa13.96□□□□□ -0.17
PFKM-216ENST00000549366 CFTRP13569 1480 aa13.94□□□□□ -0.18
PFKM-216ENST00000549366 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
PFKM-216ENST00000549366 THOC2Q8NI27 1593 aaKnown RBP13.91□□□□□ -0.18
PFKM-216ENST00000549366 CEP164Q9UPV0 1460 aa13.88□□□□□ -0.19
PFKM-216ENST00000549366 CUX2O14529 1486 aa13.87□□□□□ -0.19
PFKM-216ENST00000549366 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
PFKM-216ENST00000549366 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.2
PFKM-216ENST00000549366 SENP3Q9H4L4 574 aaPredicted RBP13.81□□□□□ -0.2
PFKM-216ENST00000549366 WDR62O43379 1518 aa13.8□□□□□ -0.2
PFKM-216ENST00000549366 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
PFKM-216ENST00000549366 ABCC8Q09428 1581 aa13.7□□□□□ -0.22
PFKM-216ENST00000549366 DNMBPQ6XZF7 1577 aa13.7□□□□□ -0.22
PFKM-216ENST00000549366 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
PFKM-216ENST00000549366 PHF23Q9BUL5 403 aaPredicted RBP13.58□□□□□ -0.24
PFKM-216ENST00000549366 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
PFKM-216ENST00000549366 CUX1P39880 1505 aa13.57□□□□□ -0.24
PFKM-216ENST00000549366 BIVM-ERCC5R4GMW8 1640 aa13.55□□□□□ -0.24
PFKM-216ENST00000549366 POLA1P09884 1462 aaPredicted RBP13.54□□□□□ -0.24
PFKM-216ENST00000549366 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
PFKM-216ENST00000549366 FGD5Q6ZNL6 1462 aa13.52□□□□□ -0.25
PFKM-216ENST00000549366 WDR97A6NE52 1622 aa13.52□□□□□ -0.25
PFKM-216ENST00000549366 TARBP1Q13395 1621 aaKnown RBP13.52□□□□□ -0.25
PFKM-216ENST00000549366 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
PFKM-216ENST00000549366 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
PFKM-216ENST00000549366 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
PFKM-216ENST00000549366 SOGA1O94964 1423 aa13.44□□□□□ -0.26
PFKM-216ENST00000549366 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
PFKM-216ENST00000549366 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
PFKM-216ENST00000549366 PBRM1Q86U86 1689 aa13.41□□□□□ -0.26
PFKM-216ENST00000549366 ABCA10Q8WWZ4 1543 aa13.41□□□□□ -0.26
PFKM-216ENST00000549366 ABCA5Q8WWZ7 1642 aa13.39□□□□□ -0.27
PFKM-216ENST00000549366 AQRO60306 1485 aaKnown RBP eCLIP13.35□□□□□ -0.27
PFKM-216ENST00000549366 GRIN2BQ13224 1484 aa13.33□□□□□ -0.28
PFKM-216ENST00000549366 GAPVD1Q14C86 1478 aa13.33□□□□□ -0.28
PFKM-216ENST00000549366 CHD1O14646 1710 aa13.33□□□□□ -0.28
PFKM-216ENST00000549366 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
PFKM-216ENST00000549366 MAGI1Q96QZ7 1491 aaPredicted RBP13.32□□□□□ -0.28
PFKM-216ENST00000549366 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
PFKM-216ENST00000549366 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
PFKM-216ENST00000549366 ADAMTS12P58397 1594 aa13.27□□□□□ -0.29
PFKM-216ENST00000549366 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
PFKM-216ENST00000549366 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
PFKM-216ENST00000549366 CUL7Q14999 1698 aa13.23□□□□□ -0.29
PFKM-216ENST00000549366 DNAJC5Q9H3Z4 198 aa13.19□□□□□ -0.3
PFKM-216ENST00000549366 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
PFKM-216ENST00000549366 FHAD1B1AJZ9 1412 aa13.18□□□□□ -0.3
PFKM-216ENST00000549366 GRIN2AQ12879 1464 aa13.16□□□□□ -0.3
PFKM-216ENST00000549366 FBLN2P98095 1184 aa13.16□□□□□ -0.3
PFKM-216ENST00000549366 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
PFKM-216ENST00000549366 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
PFKM-216ENST00000549366 CLASP1Q7Z460 1538 aa13.14□□□□□ -0.31
PFKM-216ENST00000549366 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
PFKM-216ENST00000549366 NUP160Q12769 1436 aa13.08□□□□□ -0.32
PFKM-216ENST00000549366 RUSC2Q8N2Y8 1516 aa13.08□□□□□ -0.32
PFKM-216ENST00000549366 IGF1RP08069 1367 aa13.07□□□□□ -0.32
PFKM-216ENST00000549366 EEA1Q15075 1411 aa13.07□□□□□ -0.32
PFKM-216ENST00000549366 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
PFKM-216ENST00000549366 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
PFKM-216ENST00000549366 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
PFKM-216ENST00000549366 ARHGEF11O15085 1522 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms