RNA–Protein interactions for RNA: ENST00000549265.1

PCBP3-215, Transcript of poly(rC) binding protein 3, humanhuman

TSL 2

Gene PCBP3, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-215ENST00000549265 NISCHQ9Y2I1 1504 aa37.97■■■■□ 3.67
PCBP3-215ENST00000549265 CCDC180Q9P1Z9 1646 aa33.86■■■■□ 3.01
PCBP3-215ENST00000549265 ABCC9O60706 1549 aa33.18■■■□□ 2.9
PCBP3-215ENST00000549265 RB1CC1Q8TDY2 1594 aa31.95■■■□□ 2.71
PCBP3-215ENST00000549265 NACADO15069 1562 aa31.9■■■□□ 2.7
PCBP3-215ENST00000549265 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
PCBP3-215ENST00000549265 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.67
PCBP3-215ENST00000549265 ZCCHC6Q5VYS8 1495 aaKnown RBP31.58■■■□□ 2.65
PCBP3-215ENST00000549265 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
PCBP3-215ENST00000549265 UNC13AQ9UPW8 1703 aa31.15■■■□□ 2.58
PCBP3-215ENST00000549265 PABPN1Q86U42 306 aaKnown RBP eCLIP30.97■■■□□ 2.55
PCBP3-215ENST00000549265 BICRAQ9NZM4 1560 aa30.92■■■□□ 2.54
PCBP3-215ENST00000549265 SCRIBQ14160 1630 aa30.76■■■□□ 2.52
PCBP3-215ENST00000549265 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
PCBP3-215ENST00000549265 DNAJC5BQ9UF47 199 aa30.61■■■□□ 2.49
PCBP3-215ENST00000549265 EIF4G1Q04637 1599 aaKnown RBP30.14■■■□□ 2.42
PCBP3-215ENST00000549265 CC2D2AQ9P2K1 1620 aa30.04■■■□□ 2.4
PCBP3-215ENST00000549265 CECR2Q9BXF3 1484 aa29.88■■■□□ 2.37
PCBP3-215ENST00000549265 SMARCA4P51532 1647 aa29.47■■■□□ 2.31
PCBP3-215ENST00000549265 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
PCBP3-215ENST00000549265 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
PCBP3-215ENST00000549265 ATAD2BQ9ULI0 1458 aa29.37■■■□□ 2.29
PCBP3-215ENST00000549265 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
PCBP3-215ENST00000549265 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
PCBP3-215ENST00000549265 PEG3Q9GZU2 1588 aa29.25■■■□□ 2.27
PCBP3-215ENST00000549265 MROH2BQ7Z745 1585 aa29.2■■■□□ 2.26
PCBP3-215ENST00000549265 BAZ1BQ9UIG0 1483 aaKnown RBP29.11■■■□□ 2.25
PCBP3-215ENST00000549265 WIZO95785 1651 aa28.86■■■□□ 2.21
PCBP3-215ENST00000549265 RSF1Q96T23 1441 aaPredicted RBP28.85■■■□□ 2.21
PCBP3-215ENST00000549265 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
PCBP3-215ENST00000549265 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
PCBP3-215ENST00000549265 NESP48681 1621 aa28.65■■■□□ 2.18
PCBP3-215ENST00000549265 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
PCBP3-215ENST00000549265 CADPSQ9ULU8 1353 aa28.55■■■□□ 2.16
PCBP3-215ENST00000549265 PDS5BQ9NTI5 1447 aa28.5■■■□□ 2.15
PCBP3-215ENST00000549265 CUX2O14529 1486 aa28.48■■■□□ 2.15
PCBP3-215ENST00000549265 CFTRP13569 1480 aa28.34■■■□□ 2.13
PCBP3-215ENST00000549265 KIF21AQ7Z4S6 1674 aa28.33■■■□□ 2.13
PCBP3-215ENST00000549265 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
PCBP3-215ENST00000549265 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
PCBP3-215ENST00000549265 FANCD2Q9BXW9 1451 aa28.18■■■□□ 2.1
PCBP3-215ENST00000549265 CEP164Q9UPV0 1460 aa28.17■■■□□ 2.1
PCBP3-215ENST00000549265 MRC2Q9UBG0 1479 aa28.16■■■□□ 2.1
PCBP3-215ENST00000549265 PRDM2Q13029 1718 aa28.1■■■□□ 2.09
PCBP3-215ENST00000549265 WDR62O43379 1518 aa28.08■■■□□ 2.09
PCBP3-215ENST00000549265 SUPT5HO00267 1087 aaKnown RBP27.92■■■□□ 2.06
PCBP3-215ENST00000549265 URB2Q14146 1524 aaKnown RBP27.88■■■□□ 2.05
PCBP3-215ENST00000549265 ABCC8Q09428 1581 aa27.81■■■□□ 2.04
PCBP3-215ENST00000549265 DNAJC5Q9H3Z4 198 aa27.8■■■□□ 2.04
PCBP3-215ENST00000549265 TOPBP1Q92547 1522 aa27.71■■■□□ 2.03
PCBP3-215ENST00000549265 DNMBPQ6XZF7 1577 aa27.68■■■□□ 2.02
PCBP3-215ENST00000549265 IFT140Q96RY7 1462 aa27.62■■■□□ 2.01
PCBP3-215ENST00000549265 POLA1P09884 1462 aaPredicted RBP27.45■■□□□ 1.99
PCBP3-215ENST00000549265 ZNF608Q9ULD9 1512 aaPredicted RBP27.42■■□□□ 1.98
PCBP3-215ENST00000549265 TARBP1Q13395 1621 aaKnown RBP27.42■■□□□ 1.98
PCBP3-215ENST00000549265 CUX1P39880 1505 aa27.41■■□□□ 1.98
PCBP3-215ENST00000549265 SOGA1O94964 1423 aa27.37■■□□□ 1.97
PCBP3-215ENST00000549265 FGD5Q6ZNL6 1462 aa27.35■■□□□ 1.97
PCBP3-215ENST00000549265 EIF4G3O43432 1585 aaKnown RBP27.32■■□□□ 1.96
PCBP3-215ENST00000549265 RAD54L2Q9Y4B4 1467 aa27.3■■□□□ 1.96
PCBP3-215ENST00000549265 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
PCBP3-215ENST00000549265 OSCARQ8IYS5 282 aa27.28■■□□□ 1.96
PCBP3-215ENST00000549265 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.95
PCBP3-215ENST00000549265 WRNQ14191 1432 aaPredicted RBP eCLIP27.21■■□□□ 1.95
PCBP3-215ENST00000549265 TDRD9Q8NDG6 1382 aaKnown RBP27.19■■□□□ 1.94
PCBP3-215ENST00000549265 TOP2BQ02880 1626 aa27.17■■□□□ 1.94
PCBP3-215ENST00000549265 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
PCBP3-215ENST00000549265 ABCA10Q8WWZ4 1543 aa27.13■■□□□ 1.93
PCBP3-215ENST00000549265 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
PCBP3-215ENST00000549265 GRIN2BQ13224 1484 aa27.08■■□□□ 1.93
PCBP3-215ENST00000549265 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
PCBP3-215ENST00000549265 MAGI1Q96QZ7 1491 aaPredicted RBP27.05■■□□□ 1.92
PCBP3-215ENST00000549265 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
PCBP3-215ENST00000549265 CHD1O14646 1710 aa27■■□□□ 1.91
PCBP3-215ENST00000549265 ABCA5Q8WWZ7 1642 aa27■■□□□ 1.91
PCBP3-215ENST00000549265 FBLN2P98095 1184 aa26.97■■□□□ 1.91
PCBP3-215ENST00000549265 PBRM1Q86U86 1689 aa26.96■■□□□ 1.91
PCBP3-215ENST00000549265 CHMP7Q8WUX9 453 aaPredicted RBP26.94■■□□□ 1.9
PCBP3-215ENST00000549265 SYNJ2O15056 1496 aa26.92■■□□□ 1.9
PCBP3-215ENST00000549265 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
PCBP3-215ENST00000549265 RIMBP3CA6NJZ7 1639 aa26.78■■□□□ 1.88
PCBP3-215ENST00000549265 RIMBP3BA6NNM3 1639 aa26.78■■□□□ 1.88
PCBP3-215ENST00000549265 RIMBP3Q9UFD9 1639 aa26.78■■□□□ 1.88
PCBP3-215ENST00000549265 ARHGEF11O15085 1522 aa26.77■■□□□ 1.88
PCBP3-215ENST00000549265 FHAD1B1AJZ9 1412 aa26.75■■□□□ 1.87
PCBP3-215ENST00000549265 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
PCBP3-215ENST00000549265 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
PCBP3-215ENST00000549265 GRIN2AQ12879 1464 aa26.71■■□□□ 1.87
PCBP3-215ENST00000549265 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
PCBP3-215ENST00000549265 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
PCBP3-215ENST00000549265 NUP160Q12769 1436 aa26.61■■□□□ 1.85
PCBP3-215ENST00000549265 IGF1RP08069 1367 aa26.58■■□□□ 1.85
PCBP3-215ENST00000549265 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
PCBP3-215ENST00000549265 CYB5RLQ6IPT4 315 aa26.53■■□□□ 1.84
PCBP3-215ENST00000549265 CUL7Q14999 1698 aa26.53■■□□□ 1.84
PCBP3-215ENST00000549265 ARAP1Q96P48 1450 aa26.52■■□□□ 1.84
PCBP3-215ENST00000549265 SHROOM2Q13796 1616 aa26.43■■□□□ 1.82
PCBP3-215ENST00000549265 CARMIL1Q5VZK9 1371 aa26.42■■□□□ 1.82
PCBP3-215ENST00000549265 JPH4Q96JJ6 628 aa26.36■■□□□ 1.81
PCBP3-215ENST00000549265 RUSC2Q8N2Y8 1516 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms