RNA–Protein interactions for RNA: ENST00000549209.5

SMARCC2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-206ENST00000549209 NISCHQ9Y2I1 1504 aa20.61■□□□□ 0.89
SMARCC2-206ENST00000549209 AEBP2Q6ZN18 517 aaPredicted RBP19.02■□□□□ 0.64
SMARCC2-206ENST00000549209 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
SMARCC2-206ENST00000549209 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.51
SMARCC2-206ENST00000549209 ABCC9O60706 1549 aa17.98■□□□□ 0.47
SMARCC2-206ENST00000549209 NACADO15069 1562 aa17.23■□□□□ 0.35
SMARCC2-206ENST00000549209 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
SMARCC2-206ENST00000549209 MYO15BQ96JP2 1530 aa17.17■□□□□ 0.34
SMARCC2-206ENST00000549209 ZCCHC6Q5VYS8 1495 aaKnown RBP17.16■□□□□ 0.34
SMARCC2-206ENST00000549209 DCAF8L2P0C7V8 631 aa17.13■□□□□ 0.33
SMARCC2-206ENST00000549209 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
SMARCC2-206ENST00000549209 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMARCC2-206ENST00000549209 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
SMARCC2-206ENST00000549209 UNC13AQ9UPW8 1703 aa16.8■□□□□ 0.28
SMARCC2-206ENST00000549209 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
SMARCC2-206ENST00000549209 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
SMARCC2-206ENST00000549209 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
SMARCC2-206ENST00000549209 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
SMARCC2-206ENST00000549209 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
SMARCC2-206ENST00000549209 CC2D2AQ9P2K1 1620 aa16.25■□□□□ 0.19
SMARCC2-206ENST00000549209 CECR2Q9BXF3 1484 aa16.17■□□□□ 0.18
SMARCC2-206ENST00000549209 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
SMARCC2-206ENST00000549209 SMARCA4P51532 1647 aa15.96■□□□□ 0.15
SMARCC2-206ENST00000549209 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
SMARCC2-206ENST00000549209 SENP3Q9H4L4 574 aaPredicted RBP15.94■□□□□ 0.14
SMARCC2-206ENST00000549209 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
SMARCC2-206ENST00000549209 MROH2BQ7Z745 1585 aa15.89■□□□□ 0.13
SMARCC2-206ENST00000549209 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
SMARCC2-206ENST00000549209 PEG3Q9GZU2 1588 aa15.86■□□□□ 0.13
SMARCC2-206ENST00000549209 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
SMARCC2-206ENST00000549209 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
SMARCC2-206ENST00000549209 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
SMARCC2-206ENST00000549209 WIZO95785 1651 aa15.64■□□□□ 0.09
SMARCC2-206ENST00000549209 NESP48681 1621 aa15.57■□□□□ 0.08
SMARCC2-206ENST00000549209 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
SMARCC2-206ENST00000549209 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
SMARCC2-206ENST00000549209 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
SMARCC2-206ENST00000549209 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
SMARCC2-206ENST00000549209 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
SMARCC2-206ENST00000549209 CFTRP13569 1480 aa15.39■□□□□ 0.05
SMARCC2-206ENST00000549209 CUX2O14529 1486 aa15.37■□□□□ 0.05
SMARCC2-206ENST00000549209 CCDC88BA6NC98 1476 aa15.36■□□□□ 0.05
SMARCC2-206ENST00000549209 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
SMARCC2-206ENST00000549209 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
SMARCC2-206ENST00000549209 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.03
SMARCC2-206ENST00000549209 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
SMARCC2-206ENST00000549209 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
SMARCC2-206ENST00000549209 WDR62O43379 1518 aa15.21■□□□□ 0.03
SMARCC2-206ENST00000549209 URB2Q14146 1524 aaKnown RBP15.15■□□□□ 0.02
SMARCC2-206ENST00000549209 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
SMARCC2-206ENST00000549209 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
SMARCC2-206ENST00000549209 PLPPR3Q6T4P5 718 aa15.05■□□□□ -0
SMARCC2-206ENST00000549209 DNAJC5Q9H3Z4 198 aa15.04■□□□□ -0
SMARCC2-206ENST00000549209 TOPBP1Q92547 1522 aa15.02□□□□□ -0.01
SMARCC2-206ENST00000549209 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
SMARCC2-206ENST00000549209 DNMBPQ6XZF7 1577 aa14.97□□□□□ -0.01
SMARCC2-206ENST00000549209 IFT140Q96RY7 1462 aa14.93□□□□□ -0.02
SMARCC2-206ENST00000549209 FOXD1Q16676 465 aa14.92□□□□□ -0.02
SMARCC2-206ENST00000549209 CUX1P39880 1505 aa14.91□□□□□ -0.02
SMARCC2-206ENST00000549209 ZNF608Q9ULD9 1512 aaPredicted RBP14.91□□□□□ -0.02
SMARCC2-206ENST00000549209 POLA1P09884 1462 aaPredicted RBP14.9□□□□□ -0.02
SMARCC2-206ENST00000549209 TARBP1Q13395 1621 aaKnown RBP14.87□□□□□ -0.03
SMARCC2-206ENST00000549209 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
SMARCC2-206ENST00000549209 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
SMARCC2-206ENST00000549209 SOGA1O94964 1423 aa14.82□□□□□ -0.04
SMARCC2-206ENST00000549209 AQRO60306 1485 aaKnown RBP eCLIP14.81□□□□□ -0.045e-9■■■■□ 23
SMARCC2-206ENST00000549209 EIF4G3O43432 1585 aaKnown RBP14.77□□□□□ -0.04
SMARCC2-206ENST00000549209 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
SMARCC2-206ENST00000549209 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
SMARCC2-206ENST00000549209 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
SMARCC2-206ENST00000549209 TOP2BQ02880 1626 aa14.72□□□□□ -0.05
SMARCC2-206ENST00000549209 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
SMARCC2-206ENST00000549209 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.05
SMARCC2-206ENST00000549209 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
SMARCC2-206ENST00000549209 BIVM-ERCC5R4GMW8 1640 aa14.7□□□□□ -0.06
SMARCC2-206ENST00000549209 GRIN2BQ13224 1484 aa14.65□□□□□ -0.06
SMARCC2-206ENST00000549209 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
SMARCC2-206ENST00000549209 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
SMARCC2-206ENST00000549209 ABCA5Q8WWZ7 1642 aa14.63□□□□□ -0.07
SMARCC2-206ENST00000549209 MAGI1Q96QZ7 1491 aaPredicted RBP14.62□□□□□ -0.07
SMARCC2-206ENST00000549209 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
SMARCC2-206ENST00000549209 FBLN2P98095 1184 aa14.55□□□□□ -0.08
SMARCC2-206ENST00000549209 CHD1O14646 1710 aa14.55□□□□□ -0.08
SMARCC2-206ENST00000549209 CHMP7Q8WUX9 453 aaPredicted RBP14.53□□□□□ -0.08
SMARCC2-206ENST00000549209 PBRM1Q86U86 1689 aa14.52□□□□□ -0.09
SMARCC2-206ENST00000549209 PPP6R1Q9UPN7 881 aa14.51□□□□□ -0.09
SMARCC2-206ENST00000549209 ERICH3Q5RHP9 1530 aa14.51□□□□□ -0.09
SMARCC2-206ENST00000549209 CLASP1Q7Z460 1538 aa14.5□□□□□ -0.09
SMARCC2-206ENST00000549209 ADRA2BP18089 450 aa14.49□□□□□ -0.09
SMARCC2-206ENST00000549209 ARHGEF11O15085 1522 aa14.49□□□□□ -0.09
SMARCC2-206ENST00000549209 ADAMTS12P58397 1594 aa14.48□□□□□ -0.09
SMARCC2-206ENST00000549209 FHAD1B1AJZ9 1412 aa14.48□□□□□ -0.09
SMARCC2-206ENST00000549209 IGF1RP08069 1367 aa14.47□□□□□ -0.09
SMARCC2-206ENST00000549209 GRIN2AQ12879 1464 aa14.46□□□□□ -0.09
SMARCC2-206ENST00000549209 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.09
SMARCC2-206ENST00000549209 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.09
SMARCC2-206ENST00000549209 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.09
SMARCC2-206ENST00000549209 NUP160Q12769 1436 aa14.45□□□□□ -0.1
SMARCC2-206ENST00000549209 KIF27Q86VH2 1401 aa14.43□□□□□ -0.1
SMARCC2-206ENST00000549209 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms