RNA–Protein interactions for RNA: ENST00000549196.1

ITGB7-207, Transcript of integrin subunit beta 7, humanhuman

TSL 4

Gene ITGB7, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB7-207ENST00000549196 NISCHQ9Y2I1 1504 aa28.9■■■□□ 2.22
ITGB7-207ENST00000549196 CCDC180Q9P1Z9 1646 aa25.8■■□□□ 1.72
ITGB7-207ENST00000549196 ABCC9O60706 1549 aa25.41■■□□□ 1.66
ITGB7-207ENST00000549196 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
ITGB7-207ENST00000549196 NACADO15069 1562 aa24.27■■□□□ 1.48
ITGB7-207ENST00000549196 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
ITGB7-207ENST00000549196 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
ITGB7-207ENST00000549196 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
ITGB7-207ENST00000549196 DCAF1Q9Y4B6 1507 aa23.9■■□□□ 1.42
ITGB7-207ENST00000549196 UNC13AQ9UPW8 1703 aa23.78■■□□□ 1.4
ITGB7-207ENST00000549196 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
ITGB7-207ENST00000549196 BICRAQ9NZM4 1560 aa23.63■■□□□ 1.37
ITGB7-207ENST00000549196 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
ITGB7-207ENST00000549196 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
ITGB7-207ENST00000549196 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
ITGB7-207ENST00000549196 EIF4G1Q04637 1599 aaKnown RBP23.03■■□□□ 1.28
ITGB7-207ENST00000549196 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
ITGB7-207ENST00000549196 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
ITGB7-207ENST00000549196 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
ITGB7-207ENST00000549196 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
ITGB7-207ENST00000549196 ATAD2BQ9ULI0 1458 aa22.39■■□□□ 1.17
ITGB7-207ENST00000549196 NCAPD3P42695 1498 aa22.38■■□□□ 1.17
ITGB7-207ENST00000549196 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
ITGB7-207ENST00000549196 HMGXB3Q12766 1538 aa22.3■■□□□ 1.16
ITGB7-207ENST00000549196 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
ITGB7-207ENST00000549196 DNAJC5Q9H3Z4 198 aa22.28■■□□□ 1.16
ITGB7-207ENST00000549196 PEG3Q9GZU2 1588 aa22.26■■□□□ 1.15
ITGB7-207ENST00000549196 BAZ1BQ9UIG0 1483 aaKnown RBP22.21■■□□□ 1.15
ITGB7-207ENST00000549196 WIZO95785 1651 aa22.04■■□□□ 1.12
ITGB7-207ENST00000549196 RSF1Q96T23 1441 aaPredicted RBP21.95■■□□□ 1.1
ITGB7-207ENST00000549196 NESP48681 1621 aa21.93■■□□□ 1.1
ITGB7-207ENST00000549196 ERCC6Q03468 1493 aa21.91■■□□□ 1.1
ITGB7-207ENST00000549196 LAMC3Q9Y6N6 1575 aa21.85■■□□□ 1.09
ITGB7-207ENST00000549196 TOP2AP11388 1531 aaKnown RBP21.81■■□□□ 1.08
ITGB7-207ENST00000549196 CUX2O14529 1486 aa21.73■■□□□ 1.07
ITGB7-207ENST00000549196 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
ITGB7-207ENST00000549196 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
ITGB7-207ENST00000549196 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
ITGB7-207ENST00000549196 THOC2Q8NI27 1593 aaKnown RBP21.67■■□□□ 1.06
ITGB7-207ENST00000549196 CFTRP13569 1480 aa21.57■■□□□ 1.04
ITGB7-207ENST00000549196 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.03
ITGB7-207ENST00000549196 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
ITGB7-207ENST00000549196 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
ITGB7-207ENST00000549196 CEP164Q9UPV0 1460 aa21.5■■□□□ 1.03
ITGB7-207ENST00000549196 WDR62O43379 1518 aa21.45■■□□□ 1.02
ITGB7-207ENST00000549196 PRDM2Q13029 1718 aa21.4■■□□□ 1.02
ITGB7-207ENST00000549196 URB2Q14146 1524 aaKnown RBP21.3■■□□□ 1
ITGB7-207ENST00000549196 SUPT5HO00267 1087 aaKnown RBP21.23■□□□□ 0.99
ITGB7-207ENST00000549196 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
ITGB7-207ENST00000549196 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
ITGB7-207ENST00000549196 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
ITGB7-207ENST00000549196 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
ITGB7-207ENST00000549196 ZNF608Q9ULD9 1512 aaPredicted RBP20.98■□□□□ 0.95
ITGB7-207ENST00000549196 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
ITGB7-207ENST00000549196 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
ITGB7-207ENST00000549196 CUX1P39880 1505 aa20.92■□□□□ 0.94
ITGB7-207ENST00000549196 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
ITGB7-207ENST00000549196 TRIM41Q8WV44 630 aa20.89■□□□□ 0.93
ITGB7-207ENST00000549196 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
ITGB7-207ENST00000549196 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
ITGB7-207ENST00000549196 SOGA1O94964 1423 aa20.82■□□□□ 0.92
ITGB7-207ENST00000549196 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.92
ITGB7-207ENST00000549196 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
ITGB7-207ENST00000549196 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
ITGB7-207ENST00000549196 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
ITGB7-207ENST00000549196 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.91
ITGB7-207ENST00000549196 SYNJ1O43426 1573 aa20.7■□□□□ 0.9
ITGB7-207ENST00000549196 BIVM-ERCC5R4GMW8 1640 aa20.7■□□□□ 0.9
ITGB7-207ENST00000549196 TOP2BQ02880 1626 aa20.69■□□□□ 0.9
ITGB7-207ENST00000549196 CHD1O14646 1710 aa20.65■□□□□ 0.9
ITGB7-207ENST00000549196 ABCA10Q8WWZ4 1543 aa20.65■□□□□ 0.9
ITGB7-207ENST00000549196 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
ITGB7-207ENST00000549196 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
ITGB7-207ENST00000549196 ABCA5Q8WWZ7 1642 aa20.62■□□□□ 0.89
ITGB7-207ENST00000549196 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
ITGB7-207ENST00000549196 PBRM1Q86U86 1689 aa20.6■□□□□ 0.89
ITGB7-207ENST00000549196 MAGI1Q96QZ7 1491 aaPredicted RBP20.59■□□□□ 0.89
ITGB7-207ENST00000549196 FBLN2P98095 1184 aa20.57■□□□□ 0.88
ITGB7-207ENST00000549196 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
ITGB7-207ENST00000549196 RIMBP3CA6NJZ7 1639 aa20.5■□□□□ 0.87
ITGB7-207ENST00000549196 RIMBP3BA6NNM3 1639 aa20.5■□□□□ 0.87
ITGB7-207ENST00000549196 RIMBP3Q9UFD9 1639 aa20.5■□□□□ 0.87
ITGB7-207ENST00000549196 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
ITGB7-207ENST00000549196 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
ITGB7-207ENST00000549196 ADAMTS12P58397 1594 aa20.45■□□□□ 0.86
ITGB7-207ENST00000549196 CLASP1Q7Z460 1538 aa20.44■□□□□ 0.86
ITGB7-207ENST00000549196 ERICH3Q5RHP9 1530 aa20.41■□□□□ 0.86
ITGB7-207ENST00000549196 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
ITGB7-207ENST00000549196 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
ITGB7-207ENST00000549196 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
ITGB7-207ENST00000549196 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
ITGB7-207ENST00000549196 NUP160Q12769 1436 aa20.28■□□□□ 0.84
ITGB7-207ENST00000549196 KIF27Q86VH2 1401 aa20.27■□□□□ 0.84
ITGB7-207ENST00000549196 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
ITGB7-207ENST00000549196 CUL7Q14999 1698 aa20.2■□□□□ 0.82
ITGB7-207ENST00000549196 IGF1RP08069 1367 aa20.19■□□□□ 0.82
ITGB7-207ENST00000549196 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
ITGB7-207ENST00000549196 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
ITGB7-207ENST00000549196 ERCC6L2Q5T890 1561 aa20.15■□□□□ 0.82
ITGB7-207ENST00000549196 CARMIL1Q5VZK9 1371 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms