RNA–Protein interactions for RNA: ENST00000549146.5

NOVA1-210, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 4

Gene NOVA1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-210ENST00000549146 NISCHQ9Y2I1 1504 aa26.78■■□□□ 1.88
NOVA1-210ENST00000549146 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
NOVA1-210ENST00000549146 ABCC9O60706 1549 aa23.32■■□□□ 1.32
NOVA1-210ENST00000549146 RB1CC1Q8TDY2 1594 aa22.42■■□□□ 1.18
NOVA1-210ENST00000549146 NACADO15069 1562 aa22.4■■□□□ 1.18
NOVA1-210ENST00000549146 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
NOVA1-210ENST00000549146 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
NOVA1-210ENST00000549146 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
NOVA1-210ENST00000549146 DCAF1Q9Y4B6 1507 aa22.18■■□□□ 1.14
NOVA1-210ENST00000549146 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
NOVA1-210ENST00000549146 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
NOVA1-210ENST00000549146 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
NOVA1-210ENST00000549146 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
NOVA1-210ENST00000549146 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
NOVA1-210ENST00000549146 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
NOVA1-210ENST00000549146 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
NOVA1-210ENST00000549146 CC2D2AQ9P2K1 1620 aa21.1■□□□□ 0.97
NOVA1-210ENST00000549146 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
NOVA1-210ENST00000549146 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
NOVA1-210ENST00000549146 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
NOVA1-210ENST00000549146 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
NOVA1-210ENST00000549146 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
NOVA1-210ENST00000549146 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
NOVA1-210ENST00000549146 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
NOVA1-210ENST00000549146 PEG3Q9GZU2 1588 aa20.6■□□□□ 0.89
NOVA1-210ENST00000549146 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
NOVA1-210ENST00000549146 BAZ1BQ9UIG0 1483 aaKnown RBP20.49■□□□□ 0.87
NOVA1-210ENST00000549146 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
NOVA1-210ENST00000549146 WIZO95785 1651 aa20.39■□□□□ 0.86
NOVA1-210ENST00000549146 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
NOVA1-210ENST00000549146 NESP48681 1621 aa20.18■□□□□ 0.82
NOVA1-210ENST00000549146 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
NOVA1-210ENST00000549146 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.8
NOVA1-210ENST00000549146 ERCC6Q03468 1493 aa20.07■□□□□ 0.8
NOVA1-210ENST00000549146 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
NOVA1-210ENST00000549146 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
NOVA1-210ENST00000549146 CFTRP13569 1480 aa19.96■□□□□ 0.79
NOVA1-210ENST00000549146 KIF21AQ7Z4S6 1674 aa19.93■□□□□ 0.78
NOVA1-210ENST00000549146 CUX2O14529 1486 aa19.91■□□□□ 0.78
NOVA1-210ENST00000549146 THOC2Q8NI27 1593 aaKnown RBP19.88■□□□□ 0.77
NOVA1-210ENST00000549146 FANCD2Q9BXW9 1451 aa19.83■□□□□ 0.76
NOVA1-210ENST00000549146 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
NOVA1-210ENST00000549146 SUPT5HO00267 1087 aaKnown RBP19.79■□□□□ 0.76
NOVA1-210ENST00000549146 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
NOVA1-210ENST00000549146 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
NOVA1-210ENST00000549146 WDR62O43379 1518 aa19.73■□□□□ 0.75
NOVA1-210ENST00000549146 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
NOVA1-210ENST00000549146 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
NOVA1-210ENST00000549146 ABCC8Q09428 1581 aa19.5■□□□□ 0.71
NOVA1-210ENST00000549146 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
NOVA1-210ENST00000549146 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
NOVA1-210ENST00000549146 CUX1P39880 1505 aa19.36■□□□□ 0.69
NOVA1-210ENST00000549146 DNAJC5Q9H3Z4 198 aa19.36■□□□□ 0.69
NOVA1-210ENST00000549146 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
NOVA1-210ENST00000549146 TARBP1Q13395 1621 aaKnown RBP19.32■□□□□ 0.68
NOVA1-210ENST00000549146 ZNF608Q9ULD9 1512 aaPredicted RBP19.31■□□□□ 0.68
NOVA1-210ENST00000549146 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
NOVA1-210ENST00000549146 RAD54L2Q9Y4B4 1467 aa19.26■□□□□ 0.67
NOVA1-210ENST00000549146 SOGA1O94964 1423 aa19.25■□□□□ 0.67
NOVA1-210ENST00000549146 EIF4G3O43432 1585 aaKnown RBP19.22■□□□□ 0.67
NOVA1-210ENST00000549146 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
NOVA1-210ENST00000549146 AQRO60306 1485 aaKnown RBP eCLIP19.2■□□□□ 0.66
NOVA1-210ENST00000549146 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
NOVA1-210ENST00000549146 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
NOVA1-210ENST00000549146 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
NOVA1-210ENST00000549146 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
NOVA1-210ENST00000549146 WDR97A6NE52 1622 aa19.14■□□□□ 0.66
NOVA1-210ENST00000549146 ABCA10Q8WWZ4 1543 aa19.11■□□□□ 0.65
NOVA1-210ENST00000549146 OSCARQ8IYS5 282 aa19.08■□□□□ 0.64
NOVA1-210ENST00000549146 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
NOVA1-210ENST00000549146 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
NOVA1-210ENST00000549146 ABCA5Q8WWZ7 1642 aa19.03■□□□□ 0.64
NOVA1-210ENST00000549146 SNAPC4Q5SXM2 1469 aa19.01■□□□□ 0.63
NOVA1-210ENST00000549146 MAGI1Q96QZ7 1491 aaPredicted RBP18.99■□□□□ 0.63
NOVA1-210ENST00000549146 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
NOVA1-210ENST00000549146 CHD1O14646 1710 aa18.97■□□□□ 0.63
NOVA1-210ENST00000549146 FBLN2P98095 1184 aa18.93■□□□□ 0.62
NOVA1-210ENST00000549146 SYNJ2O15056 1496 aa18.92■□□□□ 0.62
NOVA1-210ENST00000549146 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
NOVA1-210ENST00000549146 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
NOVA1-210ENST00000549146 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
NOVA1-210ENST00000549146 FHAD1B1AJZ9 1412 aa18.82■□□□□ 0.6
NOVA1-210ENST00000549146 KIF27Q86VH2 1401 aa18.81■□□□□ 0.6
NOVA1-210ENST00000549146 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
NOVA1-210ENST00000549146 GRIN2AQ12879 1464 aa18.79■□□□□ 0.6
NOVA1-210ENST00000549146 ARHGEF11O15085 1522 aa18.77■□□□□ 0.6
NOVA1-210ENST00000549146 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.6
NOVA1-210ENST00000549146 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.6
NOVA1-210ENST00000549146 IGF1RP08069 1367 aa18.77■□□□□ 0.6
NOVA1-210ENST00000549146 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.6
NOVA1-210ENST00000549146 NUP160Q12769 1436 aa18.74■□□□□ 0.59
NOVA1-210ENST00000549146 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
NOVA1-210ENST00000549146 CEP170Q5SW79 1584 aa18.71■□□□□ 0.59
NOVA1-210ENST00000549146 CUL7Q14999 1698 aa18.68■□□□□ 0.58
NOVA1-210ENST00000549146 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.58
NOVA1-210ENST00000549146 CARMIL1Q5VZK9 1371 aa18.64■□□□□ 0.57
NOVA1-210ENST00000549146 ARAP1Q96P48 1450 aa18.63■□□□□ 0.57
NOVA1-210ENST00000549146 CYB5RLQ6IPT4 315 aa18.59■□□□□ 0.57
NOVA1-210ENST00000549146 SHROOM2Q13796 1616 aa18.59■□□□□ 0.57
NOVA1-210ENST00000549146 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms