RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 NISCHQ9Y2I1 1504 aa37.13■■■■□ 3.53
NR4A1-212ENST00000549102 CCDC180Q9P1Z9 1646 aa33.15■■■□□ 2.9
NR4A1-212ENST00000549102 ABCC9O60706 1549 aa32.63■■■□□ 2.81
NR4A1-212ENST00000549102 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
NR4A1-212ENST00000549102 NACADO15069 1562 aa31.2■■■□□ 2.58
NR4A1-212ENST00000549102 DCAF8L2P0C7V8 631 aa31.1■■■□□ 2.57
NR4A1-212ENST00000549102 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
NR4A1-212ENST00000549102 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.53
NR4A1-212ENST00000549102 DCAF1Q9Y4B6 1507 aa30.71■■■□□ 2.51
NR4A1-212ENST00000549102 UNC13AQ9UPW8 1703 aa30.63■■■□□ 2.49
NR4A1-212ENST00000549102 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
NR4A1-212ENST00000549102 BICRAQ9NZM4 1560 aa30.36■■■□□ 2.45
NR4A1-212ENST00000549102 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
NR4A1-212ENST00000549102 DNAJC5BQ9UF47 199 aa30.14■■■□□ 2.42
NR4A1-212ENST00000549102 SHROOM4Q9ULL8 1493 aa30.01■■■□□ 2.4
NR4A1-212ENST00000549102 EIF4G1Q04637 1599 aaKnown RBP29.58■■■□□ 2.33
NR4A1-212ENST00000549102 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
NR4A1-212ENST00000549102 CECR2Q9BXF3 1484 aa29.35■■■□□ 2.29
NR4A1-212ENST00000549102 SMARCA4P51532 1647 aa28.88■■■□□ 2.21
NR4A1-212ENST00000549102 BAZ1AQ9NRL2 1556 aaPredicted RBP28.8■■■□□ 2.2
NR4A1-212ENST00000549102 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
NR4A1-212ENST00000549102 ATAD2BQ9ULI0 1458 aa28.76■■■□□ 2.19
NR4A1-212ENST00000549102 SMARCA2P51531 1590 aa28.73■■■□□ 2.19
NR4A1-212ENST00000549102 HMGXB3Q12766 1538 aa28.64■■■□□ 2.17
NR4A1-212ENST00000549102 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
NR4A1-212ENST00000549102 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
NR4A1-212ENST00000549102 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
NR4A1-212ENST00000549102 WIZO95785 1651 aa28.31■■■□□ 2.12
NR4A1-212ENST00000549102 RSF1Q96T23 1441 aaPredicted RBP28.18■■■□□ 2.1
NR4A1-212ENST00000549102 NESP48681 1621 aa28.17■■■□□ 2.1
NR4A1-212ENST00000549102 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
NR4A1-212ENST00000549102 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
NR4A1-212ENST00000549102 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
NR4A1-212ENST00000549102 CUX2O14529 1486 aa27.94■■■□□ 2.06
NR4A1-212ENST00000549102 CADPSQ9ULU8 1353 aa27.92■■■□□ 2.06
NR4A1-212ENST00000549102 PDS5BQ9NTI5 1447 aa27.88■■■□□ 2.05
NR4A1-212ENST00000549102 KIF21AQ7Z4S6 1674 aa27.87■■■□□ 2.05
NR4A1-212ENST00000549102 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
NR4A1-212ENST00000549102 CFTRP13569 1480 aa27.71■■■□□ 2.03
NR4A1-212ENST00000549102 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
NR4A1-212ENST00000549102 FANCD2Q9BXW9 1451 aa27.62■■■□□ 2.01
NR4A1-212ENST00000549102 MRC2Q9UBG0 1479 aa27.62■■■□□ 2.01
NR4A1-212ENST00000549102 CEP164Q9UPV0 1460 aa27.61■■■□□ 2.01
NR4A1-212ENST00000549102 PRDM2Q13029 1718 aa27.55■■■□□ 2
NR4A1-212ENST00000549102 WDR62O43379 1518 aa27.54■■■□□ 2
NR4A1-212ENST00000549102 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
NR4A1-212ENST00000549102 DNAJC5Q9H3Z4 198 aa27.33■■□□□ 1.97
NR4A1-212ENST00000549102 SUPT5HO00267 1087 aaKnown RBP27.29■■□□□ 1.96
NR4A1-212ENST00000549102 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
NR4A1-212ENST00000549102 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
NR4A1-212ENST00000549102 DNMBPQ6XZF7 1577 aa27.11■■□□□ 1.93
NR4A1-212ENST00000549102 IFT140Q96RY7 1462 aa27.04■■□□□ 1.92
NR4A1-212ENST00000549102 ZNF608Q9ULD9 1512 aaPredicted RBP26.93■■□□□ 1.9
NR4A1-212ENST00000549102 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
NR4A1-212ENST00000549102 TARBP1Q13395 1621 aaKnown RBP26.88■■□□□ 1.89
NR4A1-212ENST00000549102 CUX1P39880 1505 aa26.86■■□□□ 1.89
NR4A1-212ENST00000549102 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
NR4A1-212ENST00000549102 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
NR4A1-212ENST00000549102 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
NR4A1-212ENST00000549102 SOGA1O94964 1423 aa26.78■■□□□ 1.88
NR4A1-212ENST00000549102 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.87
NR4A1-212ENST00000549102 OSCARQ8IYS5 282 aa26.72■■□□□ 1.87
NR4A1-212ENST00000549102 WDR97A6NE52 1622 aa26.66■■□□□ 1.86
NR4A1-212ENST00000549102 TDRD9Q8NDG6 1382 aaKnown RBP26.65■■□□□ 1.86
NR4A1-212ENST00000549102 WRNQ14191 1432 aaPredicted RBP eCLIP26.59■■□□□ 1.85
NR4A1-212ENST00000549102 BIVM-ERCC5R4GMW8 1640 aa26.58■■□□□ 1.85
NR4A1-212ENST00000549102 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
NR4A1-212ENST00000549102 CHD1O14646 1710 aa26.57■■□□□ 1.84
NR4A1-212ENST00000549102 SYNJ1O43426 1573 aa26.56■■□□□ 1.84
NR4A1-212ENST00000549102 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
NR4A1-212ENST00000549102 SNAPC4Q5SXM2 1469 aa26.51■■□□□ 1.83
NR4A1-212ENST00000549102 GRIN2BQ13224 1484 aa26.5■■□□□ 1.83
NR4A1-212ENST00000549102 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
NR4A1-212ENST00000549102 PBRM1Q86U86 1689 aa26.47■■□□□ 1.83
NR4A1-212ENST00000549102 FBLN2P98095 1184 aa26.47■■□□□ 1.83
NR4A1-212ENST00000549102 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
NR4A1-212ENST00000549102 MAGI1Q96QZ7 1491 aaPredicted RBP26.46■■□□□ 1.83
NR4A1-212ENST00000549102 SYNJ2O15056 1496 aa26.36■■□□□ 1.81
NR4A1-212ENST00000549102 CHMP7Q8WUX9 453 aaPredicted RBP26.36■■□□□ 1.81
NR4A1-212ENST00000549102 RIMBP3CA6NJZ7 1639 aa26.36■■□□□ 1.81
NR4A1-212ENST00000549102 RIMBP3BA6NNM3 1639 aa26.36■■□□□ 1.81
NR4A1-212ENST00000549102 RIMBP3Q9UFD9 1639 aa26.36■■□□□ 1.81
NR4A1-212ENST00000549102 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
NR4A1-212ENST00000549102 ARHGEF11O15085 1522 aa26.31■■□□□ 1.8
NR4A1-212ENST00000549102 CLASP1Q7Z460 1538 aa26.24■■□□□ 1.79
NR4A1-212ENST00000549102 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
NR4A1-212ENST00000549102 ERICH3Q5RHP9 1530 aa26.22■■□□□ 1.79
NR4A1-212ENST00000549102 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
NR4A1-212ENST00000549102 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
NR4A1-212ENST00000549102 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
NR4A1-212ENST00000549102 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
NR4A1-212ENST00000549102 CEP170Q5SW79 1584 aa26.06■■□□□ 1.76
NR4A1-212ENST00000549102 NUP160Q12769 1436 aa26.05■■□□□ 1.76
NR4A1-212ENST00000549102 KIF27Q86VH2 1401 aa26.05■■□□□ 1.76
NR4A1-212ENST00000549102 IGF1RP08069 1367 aa25.96■■□□□ 1.75
NR4A1-212ENST00000549102 CUL7Q14999 1698 aa25.95■■□□□ 1.74
NR4A1-212ENST00000549102 SHROOM2Q13796 1616 aa25.91■■□□□ 1.74
NR4A1-212ENST00000549102 ERCC6L2Q5T890 1561 aa25.86■■□□□ 1.73
NR4A1-212ENST00000549102 RUSC2Q8N2Y8 1516 aa25.85■■□□□ 1.73
NR4A1-212ENST00000549102 CARMIL1Q5VZK9 1371 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms