RNA–Protein interactions for RNA: ENST00000549044.5

BRF1-214, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-214ENST00000549044 NISCHQ9Y2I1 1504 aa45.48■■■■■ 4.87
BRF1-214ENST00000549044 CCDC180Q9P1Z9 1646 aa40.37■■■■■ 4.05
BRF1-214ENST00000549044 ABCC9O60706 1549 aa39.73■■■■□ 3.95
BRF1-214ENST00000549044 DCAF8L2P0C7V8 631 aa38.08■■■■□ 3.69
BRF1-214ENST00000549044 RB1CC1Q8TDY2 1594 aa38.06■■■■□ 3.68
BRF1-214ENST00000549044 NACADO15069 1562 aa38■■■■□ 3.67
BRF1-214ENST00000549044 ZCCHC6Q5VYS8 1495 aaKnown RBP37.88■■■■□ 3.65
BRF1-214ENST00000549044 MYO15BQ96JP2 1530 aa37.72■■■■□ 3.63
BRF1-214ENST00000549044 DCAF1Q9Y4B6 1507 aa37.56■■■■□ 3.6
BRF1-214ENST00000549044 UNC13AQ9UPW8 1703 aa37.23■■■■□ 3.55
BRF1-214ENST00000549044 PABPN1Q86U42 306 aaKnown RBP eCLIP37.16■■■■□ 3.54
BRF1-214ENST00000549044 BICRAQ9NZM4 1560 aa37.03■■■■□ 3.52
BRF1-214ENST00000549044 SCRIBQ14160 1630 aa36.94■■■■□ 3.5
BRF1-214ENST00000549044 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
BRF1-214ENST00000549044 SHROOM4Q9ULL8 1493 aa36.45■■■■□ 3.43
BRF1-214ENST00000549044 EIF4G1Q04637 1599 aaKnown RBP36■■■■□ 3.35
BRF1-214ENST00000549044 CC2D2AQ9P2K1 1620 aa35.88■■■■□ 3.33
BRF1-214ENST00000549044 CECR2Q9BXF3 1484 aa35.66■■■■□ 3.3
BRF1-214ENST00000549044 SMARCA4P51532 1647 aa35.29■■■■□ 3.24
BRF1-214ENST00000549044 BAZ1AQ9NRL2 1556 aaPredicted RBP35.21■■■■□ 3.23
BRF1-214ENST00000549044 ATAD2BQ9ULI0 1458 aa35.16■■■■□ 3.22
BRF1-214ENST00000549044 NCAPD3P42695 1498 aa35.12■■■■□ 3.21
BRF1-214ENST00000549044 MROH2BQ7Z745 1585 aa35.11■■■■□ 3.21
BRF1-214ENST00000549044 SMARCA2P51531 1590 aa35.03■■■■□ 3.2
BRF1-214ENST00000549044 PEG3Q9GZU2 1588 aa34.92■■■■□ 3.18
BRF1-214ENST00000549044 HMGXB3Q12766 1538 aa34.9■■■■□ 3.18
BRF1-214ENST00000549044 BAZ1BQ9UIG0 1483 aaKnown RBP34.82■■■■□ 3.16
BRF1-214ENST00000549044 WIZO95785 1651 aa34.7■■■■□ 3.15
BRF1-214ENST00000549044 RSF1Q96T23 1441 aaPredicted RBP34.67■■■■□ 3.14
BRF1-214ENST00000549044 NESP48681 1621 aa34.39■■■■□ 3.1
BRF1-214ENST00000549044 TOP2AP11388 1531 aaKnown RBP34.29■■■■□ 3.08
BRF1-214ENST00000549044 ERCC6Q03468 1493 aa34.17■■■■□ 3.06
BRF1-214ENST00000549044 LAMC3Q9Y6N6 1575 aa34.15■■■■□ 3.06
BRF1-214ENST00000549044 CADPSQ9ULU8 1353 aa34.1■■■■□ 3.05
BRF1-214ENST00000549044 CCDC88BA6NC98 1476 aa33.94■■■■□ 3.02
BRF1-214ENST00000549044 PDS5BQ9NTI5 1447 aa33.93■■■■□ 3.02
BRF1-214ENST00000549044 KIF21AQ7Z4S6 1674 aa33.89■■■■□ 3.02
BRF1-214ENST00000549044 CFTRP13569 1480 aa33.88■■■■□ 3.01
BRF1-214ENST00000549044 CUX2O14529 1486 aa33.81■■■■□ 3
BRF1-214ENST00000549044 THOC2Q8NI27 1593 aaKnown RBP33.81■■■■□ 3
BRF1-214ENST00000549044 SUPT5HO00267 1087 aaKnown RBP33.77■■■■□ 3
BRF1-214ENST00000549044 FANCD2Q9BXW9 1451 aa33.72■■■□□ 2.99
BRF1-214ENST00000549044 CEP164Q9UPV0 1460 aa33.65■■■□□ 2.98
BRF1-214ENST00000549044 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
BRF1-214ENST00000549044 WDR62O43379 1518 aa33.51■■■□□ 2.95
BRF1-214ENST00000549044 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
BRF1-214ENST00000549044 DNAJC5Q9H3Z4 198 aa33.45■■■□□ 2.95
BRF1-214ENST00000549044 URB2Q14146 1524 aaKnown RBP33.43■■■□□ 2.94
BRF1-214ENST00000549044 TOPBP1Q92547 1522 aa33.18■■■□□ 2.9
BRF1-214ENST00000549044 DNMBPQ6XZF7 1577 aa33.09■■■□□ 2.89
BRF1-214ENST00000549044 ABCC8Q09428 1581 aa33.05■■■□□ 2.88
BRF1-214ENST00000549044 IFT140Q96RY7 1462 aa32.93■■■□□ 2.86
BRF1-214ENST00000549044 CUX1P39880 1505 aa32.93■■■□□ 2.86
BRF1-214ENST00000549044 ZNF608Q9ULD9 1512 aaPredicted RBP32.9■■■□□ 2.86
BRF1-214ENST00000549044 POLA1P09884 1462 aaPredicted RBP32.89■■■□□ 2.86
BRF1-214ENST00000549044 TARBP1Q13395 1621 aaKnown RBP32.81■■■□□ 2.84
BRF1-214ENST00000549044 FGD5Q6ZNL6 1462 aa32.8■■■□□ 2.84
BRF1-214ENST00000549044 RAD54L2Q9Y4B4 1467 aa32.8■■■□□ 2.84
BRF1-214ENST00000549044 SOGA1O94964 1423 aa32.75■■■□□ 2.83
BRF1-214ENST00000549044 EIF4G3O43432 1585 aaKnown RBP32.69■■■□□ 2.82
BRF1-214ENST00000549044 AQRO60306 1485 aaKnown RBP eCLIP32.68■■■□□ 2.821e-7■■■■■ 31
BRF1-214ENST00000549044 WRNQ14191 1432 aaPredicted RBP eCLIP32.65■■■□□ 2.82
BRF1-214ENST00000549044 TDRD9Q8NDG6 1382 aaKnown RBP32.63■■■□□ 2.81
BRF1-214ENST00000549044 SYNJ1O43426 1573 aa32.61■■■□□ 2.81
BRF1-214ENST00000549044 TOP2BQ02880 1626 aa32.55■■■□□ 2.8
BRF1-214ENST00000549044 BIVM-ERCC5R4GMW8 1640 aa32.55■■■□□ 2.8
BRF1-214ENST00000549044 WDR97A6NE52 1622 aa32.5■■■□□ 2.79
BRF1-214ENST00000549044 ABCA10Q8WWZ4 1543 aa32.45■■■□□ 2.78
BRF1-214ENST00000549044 OSCARQ8IYS5 282 aa32.43■■■□□ 2.78
BRF1-214ENST00000549044 GAPVD1Q14C86 1478 aa32.35■■■□□ 2.77
BRF1-214ENST00000549044 SNAPC4Q5SXM2 1469 aa32.35■■■□□ 2.77
BRF1-214ENST00000549044 GRIN2BQ13224 1484 aa32.35■■■□□ 2.77
BRF1-214ENST00000549044 ABCA5Q8WWZ7 1642 aa32.33■■■□□ 2.77
BRF1-214ENST00000549044 FBLN2P98095 1184 aa32.28■■■□□ 2.76
BRF1-214ENST00000549044 CHD1O14646 1710 aa32.28■■■□□ 2.76
BRF1-214ENST00000549044 PBRM1Q86U86 1689 aa32.25■■■□□ 2.75
BRF1-214ENST00000549044 MAGI1Q96QZ7 1491 aaPredicted RBP32.24■■■□□ 2.75
BRF1-214ENST00000549044 CHMP7Q8WUX9 453 aaPredicted RBP32.14■■■□□ 2.74
BRF1-214ENST00000549044 SYNJ2O15056 1496 aa32.14■■■□□ 2.74
BRF1-214ENST00000549044 ERICH3Q5RHP9 1530 aa32.03■■■□□ 2.72
BRF1-214ENST00000549044 ADAMTS12P58397 1594 aa32.02■■■□□ 2.72
BRF1-214ENST00000549044 FHAD1B1AJZ9 1412 aa31.97■■■□□ 2.71
BRF1-214ENST00000549044 CLASP1Q7Z460 1538 aa31.95■■■□□ 2.71
BRF1-214ENST00000549044 GRIN2AQ12879 1464 aa31.95■■■□□ 2.7
BRF1-214ENST00000549044 KIF27Q86VH2 1401 aa31.94■■■□□ 2.7
BRF1-214ENST00000549044 RIMBP3CA6NJZ7 1639 aa31.94■■■□□ 2.7
BRF1-214ENST00000549044 RIMBP3BA6NNM3 1639 aa31.94■■■□□ 2.7
BRF1-214ENST00000549044 RIMBP3Q9UFD9 1639 aa31.94■■■□□ 2.7
BRF1-214ENST00000549044 ARHGEF11O15085 1522 aa31.94■■■□□ 2.7
BRF1-214ENST00000549044 IGF1RP08069 1367 aa31.9■■■□□ 2.7
BRF1-214ENST00000549044 TRIM41Q8WV44 630 aa31.87■■■□□ 2.69
BRF1-214ENST00000549044 CEP170Q5SW79 1584 aa31.82■■■□□ 2.68
BRF1-214ENST00000549044 NUP160Q12769 1436 aa31.82■■■□□ 2.68
BRF1-214ENST00000549044 RUSC2Q8N2Y8 1516 aa31.77■■■□□ 2.68
BRF1-214ENST00000549044 ARAP1Q96P48 1450 aa31.71■■■□□ 2.67
BRF1-214ENST00000549044 CUL7Q14999 1698 aa31.69■■■□□ 2.66
BRF1-214ENST00000549044 CYB5RLQ6IPT4 315 aa31.67■■■□□ 2.66
BRF1-214ENST00000549044 CARMIL1Q5VZK9 1371 aa31.67■■■□□ 2.66
BRF1-214ENST00000549044 ERCC6L2Q5T890 1561 aa31.6■■■□□ 2.65
BRF1-214ENST00000549044 SHROOM2Q13796 1616 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 267.1 ms