RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 NISCHQ9Y2I1 1504 aa25.22■■□□□ 1.63
PFDN5-206ENST00000548984 CCDC180Q9P1Z9 1646 aa22.59■■□□□ 1.21
PFDN5-206ENST00000548984 ABCC9O60706 1549 aa22.14■■□□□ 1.13
PFDN5-206ENST00000548984 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
PFDN5-206ENST00000548984 NACADO15069 1562 aa21.25■□□□□ 0.99
PFDN5-206ENST00000548984 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
PFDN5-206ENST00000548984 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
PFDN5-206ENST00000548984 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
PFDN5-206ENST00000548984 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
PFDN5-206ENST00000548984 UNC13AQ9UPW8 1703 aa20.78■□□□□ 0.92
PFDN5-206ENST00000548984 BICRAQ9NZM4 1560 aa20.62■□□□□ 0.89
PFDN5-206ENST00000548984 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
PFDN5-206ENST00000548984 SHROOM4Q9ULL8 1493 aa20.54■□□□□ 0.88
PFDN5-206ENST00000548984 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
PFDN5-206ENST00000548984 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
PFDN5-206ENST00000548984 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
PFDN5-206ENST00000548984 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
PFDN5-206ENST00000548984 CECR2Q9BXF3 1484 aa19.95■□□□□ 0.78
PFDN5-206ENST00000548984 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
PFDN5-206ENST00000548984 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
PFDN5-206ENST00000548984 NCAPD3P42695 1498 aa19.57■□□□□ 0.72
PFDN5-206ENST00000548984 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
PFDN5-206ENST00000548984 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
PFDN5-206ENST00000548984 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
PFDN5-206ENST00000548984 PEG3Q9GZU2 1588 aa19.47■□□□□ 0.71
PFDN5-206ENST00000548984 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
PFDN5-206ENST00000548984 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.69
PFDN5-206ENST00000548984 WIZO95785 1651 aa19.17■□□□□ 0.66
PFDN5-206ENST00000548984 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
PFDN5-206ENST00000548984 LAMC3Q9Y6N6 1575 aa19.12■□□□□ 0.65
PFDN5-206ENST00000548984 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
PFDN5-206ENST00000548984 NESP48681 1621 aa19.09■□□□□ 0.65
PFDN5-206ENST00000548984 CUX2O14529 1486 aa19.06■□□□□ 0.64
PFDN5-206ENST00000548984 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
PFDN5-206ENST00000548984 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
PFDN5-206ENST00000548984 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
PFDN5-206ENST00000548984 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
PFDN5-206ENST00000548984 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
PFDN5-206ENST00000548984 CFTRP13569 1480 aa18.84■□□□□ 0.61
PFDN5-206ENST00000548984 MRC2Q9UBG0 1479 aa18.79■□□□□ 0.6
PFDN5-206ENST00000548984 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
PFDN5-206ENST00000548984 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
PFDN5-206ENST00000548984 WDR62O43379 1518 aa18.75■□□□□ 0.59
PFDN5-206ENST00000548984 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
PFDN5-206ENST00000548984 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
PFDN5-206ENST00000548984 DNAJC5Q9H3Z4 198 aa18.59■□□□□ 0.57
PFDN5-206ENST00000548984 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
PFDN5-206ENST00000548984 ABCC8Q09428 1581 aa18.49■□□□□ 0.55
PFDN5-206ENST00000548984 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
PFDN5-206ENST00000548984 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
PFDN5-206ENST00000548984 IFT140Q96RY7 1462 aa18.41■□□□□ 0.54
PFDN5-206ENST00000548984 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
PFDN5-206ENST00000548984 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.52
PFDN5-206ENST00000548984 ZNF608Q9ULD9 1512 aaPredicted RBP18.27■□□□□ 0.51
PFDN5-206ENST00000548984 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
PFDN5-206ENST00000548984 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
PFDN5-206ENST00000548984 CUX1P39880 1505 aa18.22■□□□□ 0.51
PFDN5-206ENST00000548984 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
PFDN5-206ENST00000548984 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
PFDN5-206ENST00000548984 SOGA1O94964 1423 aa18.16■□□□□ 0.5
PFDN5-206ENST00000548984 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.5
PFDN5-206ENST00000548984 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
PFDN5-206ENST00000548984 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.492e-13■■□□□ 12.6
PFDN5-206ENST00000548984 BIVM-ERCC5R4GMW8 1640 aa18.07■□□□□ 0.48
PFDN5-206ENST00000548984 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
PFDN5-206ENST00000548984 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
PFDN5-206ENST00000548984 WRNQ14191 1432 aaPredicted RBP eCLIP18.05■□□□□ 0.483e-8■□□□□ 9.6
PFDN5-206ENST00000548984 ABCA10Q8WWZ4 1543 aa18.04■□□□□ 0.48
PFDN5-206ENST00000548984 CHD1O14646 1710 aa18.03■□□□□ 0.48
PFDN5-206ENST00000548984 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
PFDN5-206ENST00000548984 MAGI1Q96QZ7 1491 aaPredicted RBP18.02■□□□□ 0.48
PFDN5-206ENST00000548984 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
PFDN5-206ENST00000548984 ABCA5Q8WWZ7 1642 aa18■□□□□ 0.47
PFDN5-206ENST00000548984 SYNJ1O43426 1573 aa18■□□□□ 0.47
PFDN5-206ENST00000548984 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
PFDN5-206ENST00000548984 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
PFDN5-206ENST00000548984 SYNJ2O15056 1496 aa17.94■□□□□ 0.46
PFDN5-206ENST00000548984 RIMBP3CA6NJZ7 1639 aa17.92■□□□□ 0.46
PFDN5-206ENST00000548984 RIMBP3BA6NNM3 1639 aa17.92■□□□□ 0.46
PFDN5-206ENST00000548984 RIMBP3Q9UFD9 1639 aa17.92■□□□□ 0.46
PFDN5-206ENST00000548984 FBLN2P98095 1184 aa17.91■□□□□ 0.46
PFDN5-206ENST00000548984 ARHGEF11O15085 1522 aa17.9■□□□□ 0.46
PFDN5-206ENST00000548984 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
PFDN5-206ENST00000548984 CLASP1Q7Z460 1538 aa17.86■□□□□ 0.45
PFDN5-206ENST00000548984 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
PFDN5-206ENST00000548984 ADAMTS12P58397 1594 aa17.84■□□□□ 0.45
PFDN5-206ENST00000548984 ERICH3Q5RHP9 1530 aa17.84■□□□□ 0.45
PFDN5-206ENST00000548984 FHAD1B1AJZ9 1412 aa17.79■□□□□ 0.44
PFDN5-206ENST00000548984 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
PFDN5-206ENST00000548984 ARAP1Q96P48 1450 aa17.73■□□□□ 0.43
PFDN5-206ENST00000548984 NUP160Q12769 1436 aa17.72■□□□□ 0.43
PFDN5-206ENST00000548984 KIF27Q86VH2 1401 aa17.7■□□□□ 0.42
PFDN5-206ENST00000548984 CEP170Q5SW79 1584 aa17.69■□□□□ 0.42
PFDN5-206ENST00000548984 CUL7Q14999 1698 aa17.66■□□□□ 0.42
PFDN5-206ENST00000548984 CYB5RLQ6IPT4 315 aa17.65■□□□□ 0.42
PFDN5-206ENST00000548984 SHROOM2Q13796 1616 aa17.63■□□□□ 0.41
PFDN5-206ENST00000548984 IGF1RP08069 1367 aa17.59■□□□□ 0.41
PFDN5-206ENST00000548984 RUSC2Q8N2Y8 1516 aa17.58■□□□□ 0.41
PFDN5-206ENST00000548984 ERCC6L2Q5T890 1561 aa17.52■□□□□ 0.39
PFDN5-206ENST00000548984 KIAA0586Q9BVV6 1533 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms