RNA–Protein interactions for RNA: ENST00000548921.5

SCRN3-213, Transcript of secernin 3, humanhuman

TSL 1 (best)

Gene SCRN3, Length 1,674 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-213ENST00000548921 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
SCRN3-213ENST00000548921 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
SCRN3-213ENST00000548921 ZCCHC6Q5VYS8 1495 aaKnown RBP23.06■■□□□ 1.28
SCRN3-213ENST00000548921 ABCC9O60706 1549 aa22.91■■□□□ 1.26
SCRN3-213ENST00000548921 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
SCRN3-213ENST00000548921 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
SCRN3-213ENST00000548921 MYO15BQ96JP2 1530 aa22.6■■□□□ 1.21
SCRN3-213ENST00000548921 NACADO15069 1562 aa22.5■■□□□ 1.19
SCRN3-213ENST00000548921 RB1CC1Q8TDY2 1594 aa22.34■■□□□ 1.17
SCRN3-213ENST00000548921 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
SCRN3-213ENST00000548921 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
SCRN3-213ENST00000548921 UNC13AQ9UPW8 1703 aa21.95■■□□□ 1.1
SCRN3-213ENST00000548921 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
SCRN3-213ENST00000548921 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
SCRN3-213ENST00000548921 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
SCRN3-213ENST00000548921 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
SCRN3-213ENST00000548921 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
SCRN3-213ENST00000548921 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
SCRN3-213ENST00000548921 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
SCRN3-213ENST00000548921 SMARCA4P51532 1647 aa21.2■□□□□ 0.98
SCRN3-213ENST00000548921 WIZO95785 1651 aa21.06■□□□□ 0.96
SCRN3-213ENST00000548921 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
SCRN3-213ENST00000548921 PEG3Q9GZU2 1588 aa20.98■□□□□ 0.95
SCRN3-213ENST00000548921 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
SCRN3-213ENST00000548921 SMARCA2P51531 1590 aa20.88■□□□□ 0.93
SCRN3-213ENST00000548921 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.93
SCRN3-213ENST00000548921 CC2D2AQ9P2K1 1620 aa20.78■□□□□ 0.92
SCRN3-213ENST00000548921 NCAPD3P42695 1498 aa20.76■□□□□ 0.91
SCRN3-213ENST00000548921 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
SCRN3-213ENST00000548921 HMGXB3Q12766 1538 aa20.72■□□□□ 0.91
SCRN3-213ENST00000548921 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
SCRN3-213ENST00000548921 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.86
SCRN3-213ENST00000548921 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
SCRN3-213ENST00000548921 CFTRP13569 1480 aa20.23■□□□□ 0.83
SCRN3-213ENST00000548921 PRDM2Q13029 1718 aa20.2■□□□□ 0.82
SCRN3-213ENST00000548921 CADPSQ9ULU8 1353 aa20.19■□□□□ 0.82
SCRN3-213ENST00000548921 LAMC3Q9Y6N6 1575 aa20.09■□□□□ 0.81
SCRN3-213ENST00000548921 ABCC8Q09428 1581 aa20.09■□□□□ 0.81
SCRN3-213ENST00000548921 NESP48681 1621 aa20.07■□□□□ 0.8
SCRN3-213ENST00000548921 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
SCRN3-213ENST00000548921 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
SCRN3-213ENST00000548921 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
SCRN3-213ENST00000548921 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
SCRN3-213ENST00000548921 PDS5BQ9NTI5 1447 aa19.91■□□□□ 0.78
SCRN3-213ENST00000548921 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
SCRN3-213ENST00000548921 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.77
SCRN3-213ENST00000548921 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
SCRN3-213ENST00000548921 CUX1P39880 1505 aa19.86■□□□□ 0.77
SCRN3-213ENST00000548921 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
SCRN3-213ENST00000548921 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
SCRN3-213ENST00000548921 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
SCRN3-213ENST00000548921 TOPBP1Q92547 1522 aa19.73■□□□□ 0.75
SCRN3-213ENST00000548921 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
SCRN3-213ENST00000548921 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
SCRN3-213ENST00000548921 ERCC6Q03468 1493 aa19.66■□□□□ 0.74
SCRN3-213ENST00000548921 SOGA1O94964 1423 aa19.66■□□□□ 0.74
SCRN3-213ENST00000548921 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
SCRN3-213ENST00000548921 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
SCRN3-213ENST00000548921 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
SCRN3-213ENST00000548921 WDR62O43379 1518 aa19.6■□□□□ 0.73
SCRN3-213ENST00000548921 EEA1Q15075 1411 aa19.6■□□□□ 0.73
SCRN3-213ENST00000548921 THOC2Q8NI27 1593 aaKnown RBP19.6■□□□□ 0.73
SCRN3-213ENST00000548921 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
SCRN3-213ENST00000548921 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
SCRN3-213ENST00000548921 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
SCRN3-213ENST00000548921 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
SCRN3-213ENST00000548921 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
SCRN3-213ENST00000548921 CUX2O14529 1486 aa19.48■□□□□ 0.71
SCRN3-213ENST00000548921 TARBP1Q13395 1621 aaKnown RBP19.48■□□□□ 0.71
SCRN3-213ENST00000548921 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
SCRN3-213ENST00000548921 IFT140Q96RY7 1462 aa19.4■□□□□ 0.7
SCRN3-213ENST00000548921 KIF21BO75037 1637 aa19.39■□□□□ 0.69
SCRN3-213ENST00000548921 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.69
SCRN3-213ENST00000548921 IGF1RP08069 1367 aa19.35■□□□□ 0.69
SCRN3-213ENST00000548921 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
SCRN3-213ENST00000548921 PRXQ9BXM0 1461 aa19.33■□□□□ 0.69
SCRN3-213ENST00000548921 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
SCRN3-213ENST00000548921 GOLGA3Q08378 1498 aa19.31■□□□□ 0.68
SCRN3-213ENST00000548921 EHMT2Q96KQ7 1210 aa19.3■□□□□ 0.68
SCRN3-213ENST00000548921 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
SCRN3-213ENST00000548921 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
SCRN3-213ENST00000548921 PBRM1Q86U86 1689 aa19.28■□□□□ 0.68
SCRN3-213ENST00000548921 RAPGEF2Q9Y4G8 1499 aa19.27■□□□□ 0.68
SCRN3-213ENST00000548921 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.67
SCRN3-213ENST00000548921 CUL7Q14999 1698 aa19.27■□□□□ 0.67
SCRN3-213ENST00000548921 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
SCRN3-213ENST00000548921 EIF4G3O43432 1585 aaKnown RBP19.24■□□□□ 0.67
SCRN3-213ENST00000548921 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
SCRN3-213ENST00000548921 GRIN2BQ13224 1484 aa19.21■□□□□ 0.67
SCRN3-213ENST00000548921 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
SCRN3-213ENST00000548921 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
SCRN3-213ENST00000548921 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
SCRN3-213ENST00000548921 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
SCRN3-213ENST00000548921 MAGI1Q96QZ7 1491 aaPredicted RBP19.08■□□□□ 0.65
SCRN3-213ENST00000548921 CEP162Q5TB80 1403 aa19.08■□□□□ 0.64
SCRN3-213ENST00000548921 CTTNBP2Q8WZ74 1663 aa19.04■□□□□ 0.64
SCRN3-213ENST00000548921 SYNJ2O15056 1496 aa19■□□□□ 0.63
SCRN3-213ENST00000548921 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
SCRN3-213ENST00000548921 CLIP1P30622 1438 aa18.97■□□□□ 0.63
SCRN3-213ENST00000548921 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms