RNA–Protein interactions for RNA: ENST00000548912.5

PXN-215, Transcript of paxillin, humanhuman

TSL 5

Gene PXN, Length 655 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-215ENST00000548912 NISCHQ9Y2I1 1504 aa46.79■■■■■ 5.08
PXN-215ENST00000548912 CCDC180Q9P1Z9 1646 aa41.77■■■■■ 4.28
PXN-215ENST00000548912 ABCC9O60706 1549 aa41.3■■■■■ 4.2
PXN-215ENST00000548912 RB1CC1Q8TDY2 1594 aa39.63■■■■□ 3.93
PXN-215ENST00000548912 DCAF8L2P0C7V8 631 aa39.49■■■■□ 3.91
PXN-215ENST00000548912 NACADO15069 1562 aa39.47■■■■□ 3.91
PXN-215ENST00000548912 MYO15BQ96JP2 1530 aa39.11■■■■□ 3.85
PXN-215ENST00000548912 ZCCHC6Q5VYS8 1495 aaKnown RBP38.83■■■■□ 3.81
PXN-215ENST00000548912 DCAF1Q9Y4B6 1507 aa38.75■■■■□ 3.79
PXN-215ENST00000548912 PABPN1Q86U42 306 aaKnown RBP eCLIP38.58■■■■□ 3.77
PXN-215ENST00000548912 UNC13AQ9UPW8 1703 aa38.45■■■■□ 3.75
PXN-215ENST00000548912 DNAJC5BQ9UF47 199 aa38.27■■■■□ 3.72
PXN-215ENST00000548912 BICRAQ9NZM4 1560 aa38.24■■■■□ 3.71
PXN-215ENST00000548912 SHROOM4Q9ULL8 1493 aa38.05■■■■□ 3.68
PXN-215ENST00000548912 SCRIBQ14160 1630 aa38.01■■■■□ 3.68
PXN-215ENST00000548912 EIF4G1Q04637 1599 aaKnown RBP37.37■■■■□ 3.57
PXN-215ENST00000548912 CC2D2AQ9P2K1 1620 aa37.31■■■■□ 3.56
PXN-215ENST00000548912 CECR2Q9BXF3 1484 aa37.22■■■■□ 3.55
PXN-215ENST00000548912 NCAPD3P42695 1498 aa36.43■■■■□ 3.42
PXN-215ENST00000548912 BAZ1AQ9NRL2 1556 aaPredicted RBP36.35■■■■□ 3.41
PXN-215ENST00000548912 SMARCA4P51532 1647 aa36.34■■■■□ 3.41
PXN-215ENST00000548912 ATAD2BQ9ULI0 1458 aa36.33■■■■□ 3.41
PXN-215ENST00000548912 SMARCA2P51531 1590 aa36.32■■■■□ 3.41
PXN-215ENST00000548912 HMGXB3Q12766 1538 aa36.15■■■■□ 3.38
PXN-215ENST00000548912 BAZ1BQ9UIG0 1483 aaKnown RBP36.05■■■■□ 3.36
PXN-215ENST00000548912 PEG3Q9GZU2 1588 aa36.03■■■■□ 3.36
PXN-215ENST00000548912 MROH2BQ7Z745 1585 aa35.98■■■■□ 3.35
PXN-215ENST00000548912 ERCC6Q03468 1493 aa35.76■■■■□ 3.32
PXN-215ENST00000548912 NESP48681 1621 aa35.54■■■■□ 3.28
PXN-215ENST00000548912 WIZO95785 1651 aa35.53■■■■□ 3.28
PXN-215ENST00000548912 CUX2O14529 1486 aa35.53■■■■□ 3.28
PXN-215ENST00000548912 LAMC3Q9Y6N6 1575 aa35.52■■■■□ 3.28
PXN-215ENST00000548912 RSF1Q96T23 1441 aaPredicted RBP35.49■■■■□ 3.27
PXN-215ENST00000548912 PDS5BQ9NTI5 1447 aa35.41■■■■□ 3.26
PXN-215ENST00000548912 CADPSQ9ULU8 1353 aa35.38■■■■□ 3.26
PXN-215ENST00000548912 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
PXN-215ENST00000548912 KIF21AQ7Z4S6 1674 aa35.06■■■■□ 3.2
PXN-215ENST00000548912 THOC2Q8NI27 1593 aaKnown RBP35.06■■■■□ 3.2
PXN-215ENST00000548912 DNAJC5Q9H3Z4 198 aa35.01■■■■□ 3.2
PXN-215ENST00000548912 CFTRP13569 1480 aa35.01■■■■□ 3.19
PXN-215ENST00000548912 MRC2Q9UBG0 1479 aa34.96■■■■□ 3.19
PXN-215ENST00000548912 CEP164Q9UPV0 1460 aa34.93■■■■□ 3.18
PXN-215ENST00000548912 FANCD2Q9BXW9 1451 aa34.91■■■■□ 3.18
PXN-215ENST00000548912 CCDC88BA6NC98 1476 aa34.83■■■■□ 3.17
PXN-215ENST00000548912 WDR62O43379 1518 aa34.79■■■■□ 3.16
PXN-215ENST00000548912 PRDM2Q13029 1718 aa34.58■■■■□ 3.13
PXN-215ENST00000548912 URB2Q14146 1524 aaKnown RBP34.5■■■■□ 3.11
PXN-215ENST00000548912 ABCC8Q09428 1581 aa34.43■■■■□ 3.1
PXN-215ENST00000548912 SUPT5HO00267 1087 aaKnown RBP34.37■■■■□ 3.09
PXN-215ENST00000548912 TOPBP1Q92547 1522 aa34.27■■■■□ 3.08
PXN-215ENST00000548912 IFT140Q96RY7 1462 aa34.26■■■■□ 3.07
PXN-215ENST00000548912 DNMBPQ6XZF7 1577 aa34.19■■■■□ 3.06
PXN-215ENST00000548912 OSCARQ8IYS5 282 aa34.11■■■■□ 3.05
PXN-215ENST00000548912 ZNF608Q9ULD9 1512 aaPredicted RBP33.99■■■■□ 3.03
PXN-215ENST00000548912 POLA1P09884 1462 aaPredicted RBP33.94■■■■□ 3.02
PXN-215ENST00000548912 SOGA1O94964 1423 aa33.91■■■■□ 3.02
PXN-215ENST00000548912 TARBP1Q13395 1621 aaKnown RBP33.86■■■■□ 3.01
PXN-215ENST00000548912 AQRO60306 1485 aaKnown RBP eCLIP33.82■■■■□ 32e-6■■■□□ 15.2
PXN-215ENST00000548912 EIF4G3O43432 1585 aaKnown RBP33.81■■■■□ 3
PXN-215ENST00000548912 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
PXN-215ENST00000548912 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
PXN-215ENST00000548912 CUX1P39880 1505 aa33.78■■■■□ 3
PXN-215ENST00000548912 TDRD9Q8NDG6 1382 aaKnown RBP33.72■■■□□ 2.99
PXN-215ENST00000548912 WDR97A6NE52 1622 aa33.71■■■□□ 2.99
PXN-215ENST00000548912 FBLN2P98095 1184 aa33.66■■■□□ 2.98
PXN-215ENST00000548912 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
PXN-215ENST00000548912 GRIN2BQ13224 1484 aa33.55■■■□□ 2.96
PXN-215ENST00000548912 CHMP7Q8WUX9 453 aaPredicted RBP33.54■■■□□ 2.96
PXN-215ENST00000548912 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
PXN-215ENST00000548912 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
PXN-215ENST00000548912 ABCA10Q8WWZ4 1543 aa33.48■■■□□ 2.95
PXN-215ENST00000548912 GAPVD1Q14C86 1478 aa33.47■■■□□ 2.95
PXN-215ENST00000548912 SNAPC4Q5SXM2 1469 aa33.47■■■□□ 2.95
PXN-215ENST00000548912 CHD1O14646 1710 aa33.44■■■□□ 2.94
PXN-215ENST00000548912 TOP2BQ02880 1626 aa33.42■■■□□ 2.94
PXN-215ENST00000548912 BIVM-ERCC5R4GMW8 1640 aa33.38■■■□□ 2.93
PXN-215ENST00000548912 SYNJ2O15056 1496 aa33.36■■■□□ 2.93
PXN-215ENST00000548912 RIMBP3CA6NJZ7 1639 aa33.34■■■□□ 2.93
PXN-215ENST00000548912 RIMBP3BA6NNM3 1639 aa33.34■■■□□ 2.93
PXN-215ENST00000548912 RIMBP3Q9UFD9 1639 aa33.34■■■□□ 2.93
PXN-215ENST00000548912 ARHGEF11O15085 1522 aa33.33■■■□□ 2.93
PXN-215ENST00000548912 SYNJ1O43426 1573 aa33.3■■■□□ 2.92
PXN-215ENST00000548912 ABCA5Q8WWZ7 1642 aa33.28■■■□□ 2.92
PXN-215ENST00000548912 PBRM1Q86U86 1689 aa33.27■■■□□ 2.92
PXN-215ENST00000548912 CYB5RLQ6IPT4 315 aa33.2■■■□□ 2.91
PXN-215ENST00000548912 CLASP1Q7Z460 1538 aa33.12■■■□□ 2.89
PXN-215ENST00000548912 FHAD1B1AJZ9 1412 aa33.11■■■□□ 2.89
PXN-215ENST00000548912 ERICH3Q5RHP9 1530 aa33.1■■■□□ 2.89
PXN-215ENST00000548912 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
PXN-215ENST00000548912 ADAMTS12P58397 1594 aa33■■■□□ 2.87
PXN-215ENST00000548912 ARAP1Q96P48 1450 aa32.99■■■□□ 2.87
PXN-215ENST00000548912 KIF27Q86VH2 1401 aa32.94■■■□□ 2.86
PXN-215ENST00000548912 NUP160Q12769 1436 aa32.92■■■□□ 2.86
PXN-215ENST00000548912 CEP170Q5SW79 1584 aa32.8■■■□□ 2.84
PXN-215ENST00000548912 IGF1RP08069 1367 aa32.8■■■□□ 2.84
PXN-215ENST00000548912 TRHP20396 242 aaPredicted RBP32.76■■■□□ 2.83
PXN-215ENST00000548912 JPH4Q96JJ6 628 aa32.73■■■□□ 2.83
PXN-215ENST00000548912 CUL7Q14999 1698 aa32.68■■■□□ 2.82
PXN-215ENST00000548912 SHROOM2Q13796 1616 aa32.64■■■□□ 2.82
PXN-215ENST00000548912 CARMIL1Q5VZK9 1371 aa32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms