RNA–Protein interactions for RNA: ENST00000548859.1

WDR90-213, Transcript of WD repeat domain 90, humanhuman

TSL 4

Gene WDR90, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-213ENST00000548859 NISCHQ9Y2I1 1504 aa44.44■■■■■ 4.7
WDR90-213ENST00000548859 CCDC180Q9P1Z9 1646 aa39.73■■■■□ 3.95
WDR90-213ENST00000548859 ABCC9O60706 1549 aa39.08■■■■□ 3.85
WDR90-213ENST00000548859 RB1CC1Q8TDY2 1594 aa37.51■■■■□ 3.6
WDR90-213ENST00000548859 NACADO15069 1562 aa37.38■■■■□ 3.58
WDR90-213ENST00000548859 DCAF8L2P0C7V8 631 aa37.14■■■■□ 3.54
WDR90-213ENST00000548859 MYO15BQ96JP2 1530 aa37.07■■■■□ 3.53
WDR90-213ENST00000548859 ZCCHC6Q5VYS8 1495 aaKnown RBP36.95■■■■□ 3.51
WDR90-213ENST00000548859 DCAF1Q9Y4B6 1507 aa36.79■■■■□ 3.48
WDR90-213ENST00000548859 UNC13AQ9UPW8 1703 aa36.73■■■■□ 3.47
WDR90-213ENST00000548859 PABPN1Q86U42 306 aaKnown RBP eCLIP36.41■■■■□ 3.42
WDR90-213ENST00000548859 BICRAQ9NZM4 1560 aa36.39■■■■□ 3.42
WDR90-213ENST00000548859 SCRIBQ14160 1630 aa36.16■■■■□ 3.38
WDR90-213ENST00000548859 DNAJC5BQ9UF47 199 aa36.14■■■■□ 3.38
WDR90-213ENST00000548859 SHROOM4Q9ULL8 1493 aa35.99■■■■□ 3.35
WDR90-213ENST00000548859 EIF4G1Q04637 1599 aaKnown RBP35.44■■■■□ 3.26
WDR90-213ENST00000548859 CC2D2AQ9P2K1 1620 aa35.39■■■■□ 3.26
WDR90-213ENST00000548859 CECR2Q9BXF3 1484 aa35.16■■■■□ 3.22
WDR90-213ENST00000548859 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
WDR90-213ENST00000548859 BAZ1AQ9NRL2 1556 aaPredicted RBP34.48■■■■□ 3.11
WDR90-213ENST00000548859 NCAPD3P42695 1498 aa34.47■■■■□ 3.11
WDR90-213ENST00000548859 ATAD2BQ9ULI0 1458 aa34.44■■■■□ 3.1
WDR90-213ENST00000548859 SMARCA2P51531 1590 aa34.4■■■■□ 3.1
WDR90-213ENST00000548859 HMGXB3Q12766 1538 aa34.31■■■■□ 3.08
WDR90-213ENST00000548859 PEG3Q9GZU2 1588 aa34.26■■■■□ 3.07
WDR90-213ENST00000548859 MROH2BQ7Z745 1585 aa34.23■■■■□ 3.07
WDR90-213ENST00000548859 BAZ1BQ9UIG0 1483 aaKnown RBP34.13■■■■□ 3.05
WDR90-213ENST00000548859 WIZO95785 1651 aa33.87■■■■□ 3.01
WDR90-213ENST00000548859 NESP48681 1621 aa33.73■■■□□ 2.99
WDR90-213ENST00000548859 ERCC6Q03468 1493 aa33.71■■■□□ 2.99
WDR90-213ENST00000548859 RSF1Q96T23 1441 aaPredicted RBP33.7■■■□□ 2.98
WDR90-213ENST00000548859 LAMC3Q9Y6N6 1575 aa33.65■■■□□ 2.98
WDR90-213ENST00000548859 CUX2O14529 1486 aa33.52■■■□□ 2.96
WDR90-213ENST00000548859 TOP2AP11388 1531 aaKnown RBP33.49■■■□□ 2.95
WDR90-213ENST00000548859 CADPSQ9ULU8 1353 aa33.43■■■□□ 2.94
WDR90-213ENST00000548859 KIF21AQ7Z4S6 1674 aa33.4■■■□□ 2.94
WDR90-213ENST00000548859 PDS5BQ9NTI5 1447 aa33.38■■■□□ 2.93
WDR90-213ENST00000548859 THOC2Q8NI27 1593 aaKnown RBP33.35■■■□□ 2.93
WDR90-213ENST00000548859 CFTRP13569 1480 aa33.18■■■□□ 2.9
WDR90-213ENST00000548859 MRC2Q9UBG0 1479 aa33.08■■■□□ 2.89
WDR90-213ENST00000548859 CCDC88BA6NC98 1476 aa33.06■■■□□ 2.88
WDR90-213ENST00000548859 FANCD2Q9BXW9 1451 aa33.05■■■□□ 2.88
WDR90-213ENST00000548859 CEP164Q9UPV0 1460 aa33.05■■■□□ 2.88
WDR90-213ENST00000548859 PRDM2Q13029 1718 aa33.03■■■□□ 2.88
WDR90-213ENST00000548859 WDR62O43379 1518 aa33.01■■■□□ 2.87
WDR90-213ENST00000548859 DNAJC5Q9H3Z4 198 aa32.82■■■□□ 2.84
WDR90-213ENST00000548859 URB2Q14146 1524 aaKnown RBP32.76■■■□□ 2.83
WDR90-213ENST00000548859 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
WDR90-213ENST00000548859 TOPBP1Q92547 1522 aa32.51■■■□□ 2.79
WDR90-213ENST00000548859 ABCC8Q09428 1581 aa32.49■■■□□ 2.79
WDR90-213ENST00000548859 DNMBPQ6XZF7 1577 aa32.46■■■□□ 2.79
WDR90-213ENST00000548859 IFT140Q96RY7 1462 aa32.38■■■□□ 2.77
WDR90-213ENST00000548859 ZNF608Q9ULD9 1512 aaPredicted RBP32.24■■■□□ 2.75
WDR90-213ENST00000548859 TARBP1Q13395 1621 aaKnown RBP32.21■■■□□ 2.75
WDR90-213ENST00000548859 POLA1P09884 1462 aaPredicted RBP32.2■■■□□ 2.75
WDR90-213ENST00000548859 EIF4G3O43432 1585 aaKnown RBP32.15■■■□□ 2.74
WDR90-213ENST00000548859 CUX1P39880 1505 aa32.14■■■□□ 2.74
WDR90-213ENST00000548859 FGD5Q6ZNL6 1462 aa32.07■■■□□ 2.72
WDR90-213ENST00000548859 RAD54L2Q9Y4B4 1467 aa32.04■■■□□ 2.72
WDR90-213ENST00000548859 SOGA1O94964 1423 aa32.04■■■□□ 2.72
WDR90-213ENST00000548859 OSCARQ8IYS5 282 aa32.01■■■□□ 2.71
WDR90-213ENST00000548859 AQRO60306 1485 aaKnown RBP eCLIP32.01■■■□□ 2.71
WDR90-213ENST00000548859 WDR97A6NE52 1622 aa31.97■■■□□ 2.71
WDR90-213ENST00000548859 TDRD9Q8NDG6 1382 aaKnown RBP31.88■■■□□ 2.69
WDR90-213ENST00000548859 CHD1O14646 1710 aa31.84■■■□□ 2.69
WDR90-213ENST00000548859 BIVM-ERCC5R4GMW8 1640 aa31.82■■■□□ 2.69
WDR90-213ENST00000548859 TOP2BQ02880 1626 aa31.8■■■□□ 2.68
WDR90-213ENST00000548859 WRNQ14191 1432 aaPredicted RBP eCLIP31.79■■■□□ 2.68
WDR90-213ENST00000548859 ABCA10Q8WWZ4 1543 aa31.76■■■□□ 2.68
WDR90-213ENST00000548859 SYNJ1O43426 1573 aa31.76■■■□□ 2.67
WDR90-213ENST00000548859 GRIN2BQ13224 1484 aa31.72■■■□□ 2.67
WDR90-213ENST00000548859 SNAPC4Q5SXM2 1469 aa31.72■■■□□ 2.67
WDR90-213ENST00000548859 PBRM1Q86U86 1689 aa31.71■■■□□ 2.67
WDR90-213ENST00000548859 ABCA5Q8WWZ7 1642 aa31.7■■■□□ 2.66
WDR90-213ENST00000548859 MAGI1Q96QZ7 1491 aaPredicted RBP31.7■■■□□ 2.66
WDR90-213ENST00000548859 GAPVD1Q14C86 1478 aa31.68■■■□□ 2.66
WDR90-213ENST00000548859 FBLN2P98095 1184 aa31.64■■■□□ 2.66
WDR90-213ENST00000548859 RIMBP3CA6NJZ7 1639 aa31.61■■■□□ 2.65
WDR90-213ENST00000548859 RIMBP3BA6NNM3 1639 aa31.61■■■□□ 2.65
WDR90-213ENST00000548859 RIMBP3Q9UFD9 1639 aa31.61■■■□□ 2.65
WDR90-213ENST00000548859 TRIM41Q8WV44 630 aa31.56■■■□□ 2.64
WDR90-213ENST00000548859 SYNJ2O15056 1496 aa31.56■■■□□ 2.64
WDR90-213ENST00000548859 ARHGEF11O15085 1522 aa31.54■■■□□ 2.64
WDR90-213ENST00000548859 CHMP7Q8WUX9 453 aaPredicted RBP31.53■■■□□ 2.64
WDR90-213ENST00000548859 CLASP1Q7Z460 1538 aa31.46■■■□□ 2.63
WDR90-213ENST00000548859 ADAMTS12P58397 1594 aa31.41■■■□□ 2.62
WDR90-213ENST00000548859 ERICH3Q5RHP9 1530 aa31.39■■■□□ 2.61
WDR90-213ENST00000548859 GRIN2AQ12879 1464 aa31.33■■■□□ 2.61
WDR90-213ENST00000548859 FHAD1B1AJZ9 1412 aa31.31■■■□□ 2.6
WDR90-213ENST00000548859 ARAP1Q96P48 1450 aa31.26■■■□□ 2.59
WDR90-213ENST00000548859 NUP160Q12769 1436 aa31.2■■■□□ 2.59
WDR90-213ENST00000548859 CEP170Q5SW79 1584 aa31.2■■■□□ 2.58
WDR90-213ENST00000548859 CYB5RLQ6IPT4 315 aa31.19■■■□□ 2.58
WDR90-213ENST00000548859 KIF27Q86VH2 1401 aa31.15■■■□□ 2.58
WDR90-213ENST00000548859 CUL7Q14999 1698 aa31.06■■■□□ 2.56
WDR90-213ENST00000548859 SHROOM2Q13796 1616 aa31.06■■■□□ 2.56
WDR90-213ENST00000548859 IGF1RP08069 1367 aa31.05■■■□□ 2.56
WDR90-213ENST00000548859 ERCC6L2Q5T890 1561 aa30.97■■■□□ 2.55
WDR90-213ENST00000548859 RUSC2Q8N2Y8 1516 aa30.95■■■□□ 2.55
WDR90-213ENST00000548859 CARMIL1Q5VZK9 1371 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms