RNA–Protein interactions for RNA: ENST00000548803.5

PMEL-207, Transcript of premelanosome protein, humanhuman

TSL 5

Gene PMEL, Length 895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-207ENST00000548803 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
PMEL-207ENST00000548803 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
PMEL-207ENST00000548803 ABCC9O60706 1549 aa20.85■□□□□ 0.93
PMEL-207ENST00000548803 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
PMEL-207ENST00000548803 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
PMEL-207ENST00000548803 NACADO15069 1562 aa20.32■□□□□ 0.84
PMEL-207ENST00000548803 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
PMEL-207ENST00000548803 RB1CC1Q8TDY2 1594 aa20.27■□□□□ 0.84
PMEL-207ENST00000548803 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
PMEL-207ENST00000548803 UNC13AQ9UPW8 1703 aa20.02■□□□□ 0.8
PMEL-207ENST00000548803 SCRIBQ14160 1630 aa19.89■□□□□ 0.77
PMEL-207ENST00000548803 BICRAQ9NZM4 1560 aa19.68■□□□□ 0.74
PMEL-207ENST00000548803 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
PMEL-207ENST00000548803 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
PMEL-207ENST00000548803 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
PMEL-207ENST00000548803 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
PMEL-207ENST00000548803 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
PMEL-207ENST00000548803 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
PMEL-207ENST00000548803 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
PMEL-207ENST00000548803 CC2D2AQ9P2K1 1620 aa18.95■□□□□ 0.62
PMEL-207ENST00000548803 WIZO95785 1651 aa18.86■□□□□ 0.61
PMEL-207ENST00000548803 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
PMEL-207ENST00000548803 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
PMEL-207ENST00000548803 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
PMEL-207ENST00000548803 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
PMEL-207ENST00000548803 DNAJC5BQ9UF47 199 aa18.74■□□□□ 0.59
PMEL-207ENST00000548803 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
PMEL-207ENST00000548803 NCAPD3P42695 1498 aa18.69■□□□□ 0.58
PMEL-207ENST00000548803 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
PMEL-207ENST00000548803 TOP2AP11388 1531 aaKnown RBP18.63■□□□□ 0.57
PMEL-207ENST00000548803 SUPT5HO00267 1087 aaKnown RBP18.58■□□□□ 0.56
PMEL-207ENST00000548803 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
PMEL-207ENST00000548803 PRDM2Q13029 1718 aa18.3■□□□□ 0.52
PMEL-207ENST00000548803 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
PMEL-207ENST00000548803 NESP48681 1621 aa18.18■□□□□ 0.5
PMEL-207ENST00000548803 CFTRP13569 1480 aa18.15■□□□□ 0.5
PMEL-207ENST00000548803 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
PMEL-207ENST00000548803 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
PMEL-207ENST00000548803 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
PMEL-207ENST00000548803 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
PMEL-207ENST00000548803 CEP164Q9UPV0 1460 aa17.93■□□□□ 0.46
PMEL-207ENST00000548803 ERCC6Q03468 1493 aa17.92■□□□□ 0.46
PMEL-207ENST00000548803 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
PMEL-207ENST00000548803 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
PMEL-207ENST00000548803 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
PMEL-207ENST00000548803 BIVM-ERCC5R4GMW8 1640 aa17.8■□□□□ 0.44
PMEL-207ENST00000548803 DNMBPQ6XZF7 1577 aa17.8■□□□□ 0.44
PMEL-207ENST00000548803 WDR62O43379 1518 aa17.8■□□□□ 0.44
PMEL-207ENST00000548803 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
PMEL-207ENST00000548803 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
PMEL-207ENST00000548803 CUX1P39880 1505 aa17.78■□□□□ 0.44
PMEL-207ENST00000548803 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
PMEL-207ENST00000548803 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
PMEL-207ENST00000548803 WRNQ14191 1432 aaPredicted RBP eCLIP17.75■□□□□ 0.43
PMEL-207ENST00000548803 FGD5Q6ZNL6 1462 aa17.64■□□□□ 0.41
PMEL-207ENST00000548803 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
PMEL-207ENST00000548803 WDR97A6NE52 1622 aa17.62■□□□□ 0.41
PMEL-207ENST00000548803 CUX2O14529 1486 aa17.61■□□□□ 0.41
PMEL-207ENST00000548803 TARBP1Q13395 1621 aaKnown RBP17.6■□□□□ 0.41
PMEL-207ENST00000548803 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
PMEL-207ENST00000548803 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
PMEL-207ENST00000548803 IFT140Q96RY7 1462 aa17.52■□□□□ 0.4
PMEL-207ENST00000548803 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
PMEL-207ENST00000548803 SOGA1O94964 1423 aa17.51■□□□□ 0.39
PMEL-207ENST00000548803 ABCA10Q8WWZ4 1543 aa17.48■□□□□ 0.39
PMEL-207ENST00000548803 EIF4G3O43432 1585 aaKnown RBP17.47■□□□□ 0.39
PMEL-207ENST00000548803 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
PMEL-207ENST00000548803 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
PMEL-207ENST00000548803 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
PMEL-207ENST00000548803 TDRD9Q8NDG6 1382 aaKnown RBP17.35■□□□□ 0.37
PMEL-207ENST00000548803 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.37
PMEL-207ENST00000548803 RUSC2Q8N2Y8 1516 aa17.35■□□□□ 0.37
PMEL-207ENST00000548803 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
PMEL-207ENST00000548803 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
PMEL-207ENST00000548803 ERICH3Q5RHP9 1530 aa17.3■□□□□ 0.36
PMEL-207ENST00000548803 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
PMEL-207ENST00000548803 CUL7Q14999 1698 aa17.28■□□□□ 0.36
PMEL-207ENST00000548803 EEA1Q15075 1411 aa17.26■□□□□ 0.35
PMEL-207ENST00000548803 ADAMTS12P58397 1594 aa17.25■□□□□ 0.35
PMEL-207ENST00000548803 CHD1O14646 1710 aa17.24■□□□□ 0.35
PMEL-207ENST00000548803 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
PMEL-207ENST00000548803 MAGI1Q96QZ7 1491 aaPredicted RBP17.22■□□□□ 0.35
PMEL-207ENST00000548803 IGF1RP08069 1367 aa17.19■□□□□ 0.34
PMEL-207ENST00000548803 FAM9AQ8IZU1 332 aaPredicted RBP17.16■□□□□ 0.34
PMEL-207ENST00000548803 KIF21BO75037 1637 aa17.15■□□□□ 0.34
PMEL-207ENST00000548803 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
PMEL-207ENST00000548803 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
PMEL-207ENST00000548803 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
PMEL-207ENST00000548803 PRXQ9BXM0 1461 aa17.12■□□□□ 0.33
PMEL-207ENST00000548803 CARMIL1Q5VZK9 1371 aa17.1■□□□□ 0.33
PMEL-207ENST00000548803 CTTNBP2Q8WZ74 1663 aa17.1■□□□□ 0.33
PMEL-207ENST00000548803 GRIN2AQ12879 1464 aa17.08■□□□□ 0.32
PMEL-207ENST00000548803 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
PMEL-207ENST00000548803 DNAJC5Q9H3Z4 198 aa17.07■□□□□ 0.32
PMEL-207ENST00000548803 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
PMEL-207ENST00000548803 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
PMEL-207ENST00000548803 CHMP7Q8WUX9 453 aaPredicted RBP17.01■□□□□ 0.31
PMEL-207ENST00000548803 FBLN2P98095 1184 aa17■□□□□ 0.31
PMEL-207ENST00000548803 NUP160Q12769 1436 aa16.97■□□□□ 0.31
PMEL-207ENST00000548803 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms