RNA–Protein interactions for RNA: ENST00000548720.5

PFKM-213, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-213ENST00000548720 NISCHQ9Y2I1 1504 aa26.58■■□□□ 1.85
PFKM-213ENST00000548720 ABCC9O60706 1549 aa24.25■■□□□ 1.47
PFKM-213ENST00000548720 CCDC180Q9P1Z9 1646 aa24.04■■□□□ 1.44
PFKM-213ENST00000548720 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
PFKM-213ENST00000548720 DNAJC5BQ9UF47 199 aa22.94■■□□□ 1.26
PFKM-213ENST00000548720 NACADO15069 1562 aa22.71■■□□□ 1.23
PFKM-213ENST00000548720 UNC13AQ9UPW8 1703 aa22.59■■□□□ 1.21
PFKM-213ENST00000548720 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
PFKM-213ENST00000548720 DCAF8L2P0C7V8 631 aa22.42■■□□□ 1.18
PFKM-213ENST00000548720 BICRAQ9NZM4 1560 aa22.36■■□□□ 1.17
PFKM-213ENST00000548720 MYO15BQ96JP2 1530 aa22.27■■□□□ 1.16
PFKM-213ENST00000548720 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
PFKM-213ENST00000548720 SHROOM4Q9ULL8 1493 aa21.93■■□□□ 1.1
PFKM-213ENST00000548720 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
PFKM-213ENST00000548720 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
PFKM-213ENST00000548720 SCRIBQ14160 1630 aa21.91■■□□□ 1.1
PFKM-213ENST00000548720 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
PFKM-213ENST00000548720 EIF4G1Q04637 1599 aaKnown RBP21.8■■□□□ 1.08
PFKM-213ENST00000548720 DNAJC5Q9H3Z4 198 aa21.18■□□□□ 0.98
PFKM-213ENST00000548720 CUX2O14529 1486 aa20.96■□□□□ 0.95
PFKM-213ENST00000548720 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
PFKM-213ENST00000548720 ERCC6Q03468 1493 aa20.91■□□□□ 0.94
PFKM-213ENST00000548720 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
PFKM-213ENST00000548720 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
PFKM-213ENST00000548720 HMGXB3Q12766 1538 aa20.82■□□□□ 0.92
PFKM-213ENST00000548720 SMARCA2P51531 1590 aa20.79■□□□□ 0.92
PFKM-213ENST00000548720 NESP48681 1621 aa20.78■□□□□ 0.92
PFKM-213ENST00000548720 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
PFKM-213ENST00000548720 BAZ1BQ9UIG0 1483 aaKnown RBP20.66■□□□□ 0.9
PFKM-213ENST00000548720 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
PFKM-213ENST00000548720 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
PFKM-213ENST00000548720 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.89
PFKM-213ENST00000548720 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
PFKM-213ENST00000548720 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
PFKM-213ENST00000548720 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
PFKM-213ENST00000548720 WIZO95785 1651 aa20.3■□□□□ 0.84
PFKM-213ENST00000548720 MRC2Q9UBG0 1479 aa20.29■□□□□ 0.84
PFKM-213ENST00000548720 WDR62O43379 1518 aa20.28■□□□□ 0.84
PFKM-213ENST00000548720 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
PFKM-213ENST00000548720 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
PFKM-213ENST00000548720 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
PFKM-213ENST00000548720 FANCD2Q9BXW9 1451 aa20.09■□□□□ 0.81
PFKM-213ENST00000548720 CFTRP13569 1480 aa20.02■□□□□ 0.8
PFKM-213ENST00000548720 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
PFKM-213ENST00000548720 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
PFKM-213ENST00000548720 PRDM2Q13029 1718 aa19.95■□□□□ 0.78
PFKM-213ENST00000548720 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
PFKM-213ENST00000548720 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
PFKM-213ENST00000548720 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.76
PFKM-213ENST00000548720 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.76
PFKM-213ENST00000548720 RIMBP3Q9UFD9 1639 aa19.83■□□□□ 0.76
PFKM-213ENST00000548720 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
PFKM-213ENST00000548720 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
PFKM-213ENST00000548720 EIF4G3O43432 1585 aaKnown RBP19.72■□□□□ 0.75
PFKM-213ENST00000548720 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
PFKM-213ENST00000548720 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
PFKM-213ENST00000548720 ARHGEF11O15085 1522 aa19.69■□□□□ 0.74
PFKM-213ENST00000548720 CHD1O14646 1710 aa19.65■□□□□ 0.74
PFKM-213ENST00000548720 DNMBPQ6XZF7 1577 aa19.62■□□□□ 0.73
PFKM-213ENST00000548720 TARBP1Q13395 1621 aaKnown RBP19.6■□□□□ 0.73
PFKM-213ENST00000548720 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
PFKM-213ENST00000548720 AQRO60306 1485 aaKnown RBP eCLIP19.52■□□□□ 0.721e-6■■■■■ 33.8
PFKM-213ENST00000548720 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
PFKM-213ENST00000548720 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
PFKM-213ENST00000548720 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
PFKM-213ENST00000548720 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
PFKM-213ENST00000548720 FBLN2P98095 1184 aa19.37■□□□□ 0.69
PFKM-213ENST00000548720 CLASP1Q7Z460 1538 aa19.36■□□□□ 0.69
PFKM-213ENST00000548720 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
PFKM-213ENST00000548720 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
PFKM-213ENST00000548720 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
PFKM-213ENST00000548720 SOGA1O94964 1423 aa19.32■□□□□ 0.68
PFKM-213ENST00000548720 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
PFKM-213ENST00000548720 TRHP20396 242 aaPredicted RBP19.3■□□□□ 0.68
PFKM-213ENST00000548720 CUX1P39880 1505 aa19.3■□□□□ 0.68
PFKM-213ENST00000548720 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
PFKM-213ENST00000548720 PBRM1Q86U86 1689 aa19.26■□□□□ 0.67
PFKM-213ENST00000548720 MAGI1Q96QZ7 1491 aaPredicted RBP19.25■□□□□ 0.67
PFKM-213ENST00000548720 GRIN2BQ13224 1484 aa19.21■□□□□ 0.67
PFKM-213ENST00000548720 SYNJ2O15056 1496 aa19.2■□□□□ 0.66
PFKM-213ENST00000548720 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
PFKM-213ENST00000548720 ABCA5Q8WWZ7 1642 aa19.15■□□□□ 0.66
PFKM-213ENST00000548720 GAPVD1Q14C86 1478 aa19.11■□□□□ 0.65
PFKM-213ENST00000548720 ERCC6L2Q5T890 1561 aa19.07■□□□□ 0.64
PFKM-213ENST00000548720 ABCA10Q8WWZ4 1543 aa19.07■□□□□ 0.64
PFKM-213ENST00000548720 ADAMTS12P58397 1594 aa19.02■□□□□ 0.64
PFKM-213ENST00000548720 CEP170Q5SW79 1584 aa19.01■□□□□ 0.63
PFKM-213ENST00000548720 GRIN2AQ12879 1464 aa19■□□□□ 0.63
PFKM-213ENST00000548720 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
PFKM-213ENST00000548720 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
PFKM-213ENST00000548720 NUP160Q12769 1436 aa18.93■□□□□ 0.62
PFKM-213ENST00000548720 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
PFKM-213ENST00000548720 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
PFKM-213ENST00000548720 KIF13AQ9H1H9 1805 aa18.89■□□□□ 0.61
PFKM-213ENST00000548720 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
PFKM-213ENST00000548720 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
PFKM-213ENST00000548720 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
PFKM-213ENST00000548720 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
PFKM-213ENST00000548720 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
PFKM-213ENST00000548720 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms