RNA–Protein interactions for RNA: ENST00000548706.1

ITGB7-205, Transcript of integrin subunit beta 7, humanhuman

TSL 3

Gene ITGB7, Length 651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB7-205ENST00000548706 NISCHQ9Y2I1 1504 aa34.5■■■■□ 3.11
ITGB7-205ENST00000548706 CCDC180Q9P1Z9 1646 aa31.22■■■□□ 2.59
ITGB7-205ENST00000548706 ABCC9O60706 1549 aa31.22■■■□□ 2.59
ITGB7-205ENST00000548706 RB1CC1Q8TDY2 1594 aa29.8■■■□□ 2.36
ITGB7-205ENST00000548706 NACADO15069 1562 aa29.55■■■□□ 2.32
ITGB7-205ENST00000548706 DNAJC5BQ9UF47 199 aa29.43■■■□□ 2.3
ITGB7-205ENST00000548706 MYO15BQ96JP2 1530 aa29.11■■■□□ 2.25
ITGB7-205ENST00000548706 UNC13AQ9UPW8 1703 aa29.09■■■□□ 2.25
ITGB7-205ENST00000548706 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
ITGB7-205ENST00000548706 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
ITGB7-205ENST00000548706 BICRAQ9NZM4 1560 aa28.82■■■□□ 2.2
ITGB7-205ENST00000548706 SHROOM4Q9ULL8 1493 aa28.64■■■□□ 2.17
ITGB7-205ENST00000548706 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
ITGB7-205ENST00000548706 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
ITGB7-205ENST00000548706 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
ITGB7-205ENST00000548706 CECR2Q9BXF3 1484 aa28.23■■■□□ 2.11
ITGB7-205ENST00000548706 SCRIBQ14160 1630 aa28.22■■■□□ 2.11
ITGB7-205ENST00000548706 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
ITGB7-205ENST00000548706 DNAJC5Q9H3Z4 198 aa27.39■■□□□ 1.98
ITGB7-205ENST00000548706 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
ITGB7-205ENST00000548706 CUX2O14529 1486 aa27.2■■□□□ 1.95
ITGB7-205ENST00000548706 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
ITGB7-205ENST00000548706 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
ITGB7-205ENST00000548706 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
ITGB7-205ENST00000548706 HMGXB3Q12766 1538 aa27.04■■□□□ 1.92
ITGB7-205ENST00000548706 SMARCA4P51532 1647 aa26.98■■□□□ 1.91
ITGB7-205ENST00000548706 BAZ1AQ9NRL2 1556 aaPredicted RBP26.85■■□□□ 1.89
ITGB7-205ENST00000548706 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
ITGB7-205ENST00000548706 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
ITGB7-205ENST00000548706 NESP48681 1621 aa26.72■■□□□ 1.87
ITGB7-205ENST00000548706 LAMC3Q9Y6N6 1575 aa26.7■■□□□ 1.86
ITGB7-205ENST00000548706 THOC2Q8NI27 1593 aaKnown RBP26.63■■□□□ 1.85
ITGB7-205ENST00000548706 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
ITGB7-205ENST00000548706 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
ITGB7-205ENST00000548706 MROH2BQ7Z745 1585 aa26.49■■□□□ 1.83
ITGB7-205ENST00000548706 CADPSQ9ULU8 1353 aa26.34■■□□□ 1.81
ITGB7-205ENST00000548706 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
ITGB7-205ENST00000548706 WDR62O43379 1518 aa26.24■■□□□ 1.79
ITGB7-205ENST00000548706 WIZO95785 1651 aa26.19■■□□□ 1.78
ITGB7-205ENST00000548706 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
ITGB7-205ENST00000548706 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
ITGB7-205ENST00000548706 CFTRP13569 1480 aa26■■□□□ 1.75
ITGB7-205ENST00000548706 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
ITGB7-205ENST00000548706 TOP2AP11388 1531 aaKnown RBP25.91■■□□□ 1.74
ITGB7-205ENST00000548706 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
ITGB7-205ENST00000548706 RSF1Q96T23 1441 aaPredicted RBP25.87■■□□□ 1.73
ITGB7-205ENST00000548706 OSCARQ8IYS5 282 aa25.85■■□□□ 1.73
ITGB7-205ENST00000548706 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
ITGB7-205ENST00000548706 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
ITGB7-205ENST00000548706 ABCC8Q09428 1581 aa25.59■■□□□ 1.69
ITGB7-205ENST00000548706 CCDC88BA6NC98 1476 aa25.54■■□□□ 1.68
ITGB7-205ENST00000548706 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
ITGB7-205ENST00000548706 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
ITGB7-205ENST00000548706 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
ITGB7-205ENST00000548706 TOPBP1Q92547 1522 aa25.51■■□□□ 1.67
ITGB7-205ENST00000548706 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
ITGB7-205ENST00000548706 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
ITGB7-205ENST00000548706 EIF4G3O43432 1585 aaKnown RBP25.41■■□□□ 1.66
ITGB7-205ENST00000548706 ARHGEF11O15085 1522 aa25.41■■□□□ 1.66
ITGB7-205ENST00000548706 TARBP1Q13395 1621 aaKnown RBP25.32■■□□□ 1.64
ITGB7-205ENST00000548706 CHD1O14646 1710 aa25.3■■□□□ 1.64
ITGB7-205ENST00000548706 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
ITGB7-205ENST00000548706 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.63
ITGB7-205ENST00000548706 POLA1P09884 1462 aaPredicted RBP25.21■■□□□ 1.63
ITGB7-205ENST00000548706 CYB5RLQ6IPT4 315 aa25.17■■□□□ 1.62
ITGB7-205ENST00000548706 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
ITGB7-205ENST00000548706 SOGA1O94964 1423 aa25.1■■□□□ 1.61
ITGB7-205ENST00000548706 FBLN2P98095 1184 aa25.09■■□□□ 1.61
ITGB7-205ENST00000548706 RAD54L2Q9Y4B4 1467 aa25.04■■□□□ 1.6
ITGB7-205ENST00000548706 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
ITGB7-205ENST00000548706 SYNJ1O43426 1573 aa25.02■■□□□ 1.6
ITGB7-205ENST00000548706 FGD5Q6ZNL6 1462 aa25.01■■□□□ 1.59
ITGB7-205ENST00000548706 TDRD9Q8NDG6 1382 aaKnown RBP25■■□□□ 1.59
ITGB7-205ENST00000548706 TRHP20396 242 aaPredicted RBP24.99■■□□□ 1.59
ITGB7-205ENST00000548706 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
ITGB7-205ENST00000548706 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
ITGB7-205ENST00000548706 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
ITGB7-205ENST00000548706 CHMP7Q8WUX9 453 aaPredicted RBP24.95■■□□□ 1.58
ITGB7-205ENST00000548706 CUX1P39880 1505 aa24.92■■□□□ 1.58
ITGB7-205ENST00000548706 SYNJ2O15056 1496 aa24.91■■□□□ 1.58
ITGB7-205ENST00000548706 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
ITGB7-205ENST00000548706 GAPVD1Q14C86 1478 aa24.82■■□□□ 1.56
ITGB7-205ENST00000548706 ABCA10Q8WWZ4 1543 aa24.77■■□□□ 1.56
ITGB7-205ENST00000548706 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
ITGB7-205ENST00000548706 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
ITGB7-205ENST00000548706 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
ITGB7-205ENST00000548706 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
ITGB7-205ENST00000548706 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
ITGB7-205ENST00000548706 NUP160Q12769 1436 aa24.56■■□□□ 1.52
ITGB7-205ENST00000548706 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
ITGB7-205ENST00000548706 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
ITGB7-205ENST00000548706 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
ITGB7-205ENST00000548706 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
ITGB7-205ENST00000548706 FHAD1B1AJZ9 1412 aa24.51■■□□□ 1.51
ITGB7-205ENST00000548706 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
ITGB7-205ENST00000548706 ERCC6L2Q5T890 1561 aa24.45■■□□□ 1.5
ITGB7-205ENST00000548706 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
ITGB7-205ENST00000548706 KIF13AQ9H1H9 1805 aa24.33■■□□□ 1.49
ITGB7-205ENST00000548706 PRG4Q92954 1404 aaPredicted RBP24.29■■□□□ 1.48
ITGB7-205ENST00000548706 JPH4Q96JJ6 628 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms