RNA–Protein interactions for RNA: ENST00000548675.1

KCNH3-202, Transcript of potassium voltage-gated channel subfamily H member 3, humanhuman

TSL 3

Gene KCNH3, Length 666 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH3-202ENST00000548675 NISCHQ9Y2I1 1504 aa29.84■■■□□ 2.37
KCNH3-202ENST00000548675 ABCC9O60706 1549 aa27.36■■□□□ 1.97
KCNH3-202ENST00000548675 CCDC180Q9P1Z9 1646 aa26.91■■□□□ 1.9
KCNH3-202ENST00000548675 DNAJC5BQ9UF47 199 aa26.05■■□□□ 1.76
KCNH3-202ENST00000548675 RB1CC1Q8TDY2 1594 aa25.8■■□□□ 1.72
KCNH3-202ENST00000548675 NACADO15069 1562 aa25.52■■□□□ 1.68
KCNH3-202ENST00000548675 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
KCNH3-202ENST00000548675 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
KCNH3-202ENST00000548675 UNC13AQ9UPW8 1703 aa25.31■■□□□ 1.64
KCNH3-202ENST00000548675 BICRAQ9NZM4 1560 aa25.15■■□□□ 1.62
KCNH3-202ENST00000548675 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
KCNH3-202ENST00000548675 CC2D2AQ9P2K1 1620 aa24.68■■□□□ 1.54
KCNH3-202ENST00000548675 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
KCNH3-202ENST00000548675 CECR2Q9BXF3 1484 aa24.65■■□□□ 1.54
KCNH3-202ENST00000548675 SHROOM4Q9ULL8 1493 aa24.63■■□□□ 1.53
KCNH3-202ENST00000548675 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
KCNH3-202ENST00000548675 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
KCNH3-202ENST00000548675 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
KCNH3-202ENST00000548675 DNAJC5Q9H3Z4 198 aa24.11■■□□□ 1.45
KCNH3-202ENST00000548675 CUX2O14529 1486 aa23.66■■□□□ 1.38
KCNH3-202ENST00000548675 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
KCNH3-202ENST00000548675 NCAPD3P42695 1498 aa23.57■■□□□ 1.36
KCNH3-202ENST00000548675 ATAD2BQ9ULI0 1458 aa23.48■■□□□ 1.35
KCNH3-202ENST00000548675 NESP48681 1621 aa23.43■■□□□ 1.34
KCNH3-202ENST00000548675 HMGXB3Q12766 1538 aa23.37■■□□□ 1.33
KCNH3-202ENST00000548675 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
KCNH3-202ENST00000548675 SMARCA2P51531 1590 aa23.35■■□□□ 1.33
KCNH3-202ENST00000548675 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
KCNH3-202ENST00000548675 BAZ1BQ9UIG0 1483 aaKnown RBP23.22■■□□□ 1.31
KCNH3-202ENST00000548675 BAZ1AQ9NRL2 1556 aaPredicted RBP23.16■■□□□ 1.3
KCNH3-202ENST00000548675 PEG3Q9GZU2 1588 aa23.11■■□□□ 1.29
KCNH3-202ENST00000548675 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
KCNH3-202ENST00000548675 KIF21AQ7Z4S6 1674 aa23.09■■□□□ 1.29
KCNH3-202ENST00000548675 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
KCNH3-202ENST00000548675 PDS5BQ9NTI5 1447 aa22.95■■□□□ 1.26
KCNH3-202ENST00000548675 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
KCNH3-202ENST00000548675 CADPSQ9ULU8 1353 aa22.84■■□□□ 1.25
KCNH3-202ENST00000548675 MRC2Q9UBG0 1479 aa22.83■■□□□ 1.25
KCNH3-202ENST00000548675 WDR62O43379 1518 aa22.79■■□□□ 1.24
KCNH3-202ENST00000548675 WIZO95785 1651 aa22.75■■□□□ 1.23
KCNH3-202ENST00000548675 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
KCNH3-202ENST00000548675 FANCD2Q9BXW9 1451 aa22.61■■□□□ 1.21
KCNH3-202ENST00000548675 CFTRP13569 1480 aa22.51■■□□□ 1.19
KCNH3-202ENST00000548675 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
KCNH3-202ENST00000548675 URB2Q14146 1524 aaKnown RBP22.49■■□□□ 1.19
KCNH3-202ENST00000548675 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
KCNH3-202ENST00000548675 TOP2AP11388 1531 aaKnown RBP22.38■■□□□ 1.17
KCNH3-202ENST00000548675 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
KCNH3-202ENST00000548675 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
KCNH3-202ENST00000548675 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
KCNH3-202ENST00000548675 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
KCNH3-202ENST00000548675 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
KCNH3-202ENST00000548675 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
KCNH3-202ENST00000548675 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
KCNH3-202ENST00000548675 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
KCNH3-202ENST00000548675 CCDC88BA6NC98 1476 aa22.15■■□□□ 1.14
KCNH3-202ENST00000548675 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
KCNH3-202ENST00000548675 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
KCNH3-202ENST00000548675 CHD1O14646 1710 aa22.05■■□□□ 1.12
KCNH3-202ENST00000548675 DNMBPQ6XZF7 1577 aa22.02■■□□□ 1.12
KCNH3-202ENST00000548675 AQRO60306 1485 aaKnown RBP eCLIP22.01■■□□□ 1.11
KCNH3-202ENST00000548675 TARBP1Q13395 1621 aaKnown RBP22■■□□□ 1.11
KCNH3-202ENST00000548675 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
KCNH3-202ENST00000548675 ABCC8Q09428 1581 aa21.99■■□□□ 1.11
KCNH3-202ENST00000548675 TRHP20396 242 aaPredicted RBP21.92■■□□□ 1.1
KCNH3-202ENST00000548675 FBLN2P98095 1184 aa21.91■■□□□ 1.1
KCNH3-202ENST00000548675 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
KCNH3-202ENST00000548675 RAD54L2Q9Y4B4 1467 aa21.86■■□□□ 1.09
KCNH3-202ENST00000548675 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
KCNH3-202ENST00000548675 SNAPC4Q5SXM2 1469 aa21.77■■□□□ 1.08
KCNH3-202ENST00000548675 SOGA1O94964 1423 aa21.77■■□□□ 1.08
KCNH3-202ENST00000548675 CLASP1Q7Z460 1538 aa21.76■■□□□ 1.07
KCNH3-202ENST00000548675 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
KCNH3-202ENST00000548675 SYNJ1O43426 1573 aa21.67■■□□□ 1.06
KCNH3-202ENST00000548675 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
KCNH3-202ENST00000548675 CUX1P39880 1505 aa21.65■■□□□ 1.06
KCNH3-202ENST00000548675 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
KCNH3-202ENST00000548675 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
KCNH3-202ENST00000548675 GRIN2BQ13224 1484 aa21.61■■□□□ 1.05
KCNH3-202ENST00000548675 SYNJ2O15056 1496 aa21.59■■□□□ 1.05
KCNH3-202ENST00000548675 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
KCNH3-202ENST00000548675 GAPVD1Q14C86 1478 aa21.53■■□□□ 1.04
KCNH3-202ENST00000548675 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
KCNH3-202ENST00000548675 ERCC6L2Q5T890 1561 aa21.46■■□□□ 1.03
KCNH3-202ENST00000548675 ABCA5Q8WWZ7 1642 aa21.45■■□□□ 1.02
KCNH3-202ENST00000548675 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
KCNH3-202ENST00000548675 GRIN2AQ12879 1464 aa21.36■■□□□ 1.01
KCNH3-202ENST00000548675 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
KCNH3-202ENST00000548675 ADAMTS12P58397 1594 aa21.31■■□□□ 1
KCNH3-202ENST00000548675 NUP160Q12769 1436 aa21.29■■□□□ 1
KCNH3-202ENST00000548675 SHROOM2Q13796 1616 aa21.26■□□□□ 0.99
KCNH3-202ENST00000548675 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
KCNH3-202ENST00000548675 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
KCNH3-202ENST00000548675 FHAD1B1AJZ9 1412 aa21.2■□□□□ 0.98
KCNH3-202ENST00000548675 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
KCNH3-202ENST00000548675 TOP2BQ02880 1626 aa21.16■□□□□ 0.98
KCNH3-202ENST00000548675 PRG4Q92954 1404 aaPredicted RBP21.12■□□□□ 0.97
KCNH3-202ENST00000548675 ERICH3Q5RHP9 1530 aa21.12■□□□□ 0.97
KCNH3-202ENST00000548675 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
KCNH3-202ENST00000548675 JPH4Q96JJ6 628 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms