RNA–Protein interactions for RNA: ENST00000548664.1

VDR-205, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-205ENST00000548664 NISCHQ9Y2I1 1504 aa43.22■■■■■ 4.51
VDR-205ENST00000548664 ABCC9O60706 1549 aa39.35■■■■□ 3.89
VDR-205ENST00000548664 CCDC180Q9P1Z9 1646 aa39.06■■■■□ 3.84
VDR-205ENST00000548664 RB1CC1Q8TDY2 1594 aa37.32■■■■□ 3.56
VDR-205ENST00000548664 DNAJC5BQ9UF47 199 aa37.26■■■■□ 3.56
VDR-205ENST00000548664 NACADO15069 1562 aa36.95■■■■□ 3.51
VDR-205ENST00000548664 UNC13AQ9UPW8 1703 aa36.61■■■■□ 3.45
VDR-205ENST00000548664 DCAF8L2P0C7V8 631 aa36.5■■■■□ 3.43
VDR-205ENST00000548664 PABPN1Q86U42 306 aaKnown RBP eCLIP36.5■■■■□ 3.43
VDR-205ENST00000548664 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
VDR-205ENST00000548664 BICRAQ9NZM4 1560 aa36.28■■■■□ 3.4
VDR-205ENST00000548664 ZCCHC6Q5VYS8 1495 aaKnown RBP35.74■■■■□ 3.31
VDR-205ENST00000548664 SHROOM4Q9ULL8 1493 aa35.72■■■■□ 3.31
VDR-205ENST00000548664 DCAF1Q9Y4B6 1507 aa35.69■■■■□ 3.3
VDR-205ENST00000548664 CC2D2AQ9P2K1 1620 aa35.59■■■■□ 3.29
VDR-205ENST00000548664 SCRIBQ14160 1630 aa35.5■■■■□ 3.27
VDR-205ENST00000548664 CECR2Q9BXF3 1484 aa35.49■■■■□ 3.27
VDR-205ENST00000548664 EIF4G1Q04637 1599 aaKnown RBP35.4■■■■□ 3.26
VDR-205ENST00000548664 DNAJC5Q9H3Z4 198 aa34.51■■■■□ 3.12
VDR-205ENST00000548664 CUX2O14529 1486 aa34.11■■■■□ 3.05
VDR-205ENST00000548664 NCAPD3P42695 1498 aa34.09■■■■□ 3.05
VDR-205ENST00000548664 ERCC6Q03468 1493 aa33.99■■■■□ 3.03
VDR-205ENST00000548664 ATAD2BQ9ULI0 1458 aa33.93■■■■□ 3.02
VDR-205ENST00000548664 HMGXB3Q12766 1538 aa33.84■■■■□ 3.01
VDR-205ENST00000548664 SMARCA4P51532 1647 aa33.84■■■■□ 3.01
VDR-205ENST00000548664 SMARCA2P51531 1590 aa33.83■■■■□ 3.01
VDR-205ENST00000548664 NESP48681 1621 aa33.71■■■□□ 2.99
VDR-205ENST00000548664 BAZ1AQ9NRL2 1556 aaPredicted RBP33.58■■■□□ 2.97
VDR-205ENST00000548664 BAZ1BQ9UIG0 1483 aaKnown RBP33.57■■■□□ 2.97
VDR-205ENST00000548664 PEG3Q9GZU2 1588 aa33.53■■■□□ 2.96
VDR-205ENST00000548664 THOC2Q8NI27 1593 aaKnown RBP33.52■■■□□ 2.96
VDR-205ENST00000548664 LAMC3Q9Y6N6 1575 aa33.44■■■□□ 2.94
VDR-205ENST00000548664 KIF21AQ7Z4S6 1674 aa33.35■■■□□ 2.93
VDR-205ENST00000548664 MROH2BQ7Z745 1585 aa33.3■■■□□ 2.92
VDR-205ENST00000548664 PDS5BQ9NTI5 1447 aa33.18■■■□□ 2.9
VDR-205ENST00000548664 CADPSQ9ULU8 1353 aa33■■■□□ 2.87
VDR-205ENST00000548664 MRC2Q9UBG0 1479 aa32.96■■■□□ 2.87
VDR-205ENST00000548664 WDR62O43379 1518 aa32.93■■■□□ 2.86
VDR-205ENST00000548664 WIZO95785 1651 aa32.92■■■□□ 2.86
VDR-205ENST00000548664 TRIM41Q8WV44 630 aa32.79■■■□□ 2.84
VDR-205ENST00000548664 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
VDR-205ENST00000548664 FANCD2Q9BXW9 1451 aa32.66■■■□□ 2.82
VDR-205ENST00000548664 CFTRP13569 1480 aa32.57■■■□□ 2.8
VDR-205ENST00000548664 TOP2AP11388 1531 aaKnown RBP32.45■■■□□ 2.78
VDR-205ENST00000548664 URB2Q14146 1524 aaKnown RBP32.44■■■□□ 2.78
VDR-205ENST00000548664 RSF1Q96T23 1441 aaPredicted RBP32.42■■■□□ 2.78
VDR-205ENST00000548664 OSCARQ8IYS5 282 aa32.39■■■□□ 2.78
VDR-205ENST00000548664 PRDM2Q13029 1718 aa32.37■■■□□ 2.77
VDR-205ENST00000548664 RIMBP3CA6NJZ7 1639 aa32.15■■■□□ 2.74
VDR-205ENST00000548664 RIMBP3BA6NNM3 1639 aa32.15■■■□□ 2.74
VDR-205ENST00000548664 RIMBP3Q9UFD9 1639 aa32.15■■■□□ 2.74
VDR-205ENST00000548664 ZNF608Q9ULD9 1512 aaPredicted RBP32.1■■■□□ 2.73
VDR-205ENST00000548664 IFT140Q96RY7 1462 aa32.09■■■□□ 2.73
VDR-205ENST00000548664 CCDC88BA6NC98 1476 aa32.04■■■□□ 2.72
VDR-205ENST00000548664 TOPBP1Q92547 1522 aa32.01■■■□□ 2.72
VDR-205ENST00000548664 ARHGEF11O15085 1522 aa31.97■■■□□ 2.71
VDR-205ENST00000548664 EIF4G3O43432 1585 aaKnown RBP31.96■■■□□ 2.71
VDR-205ENST00000548664 ABCC8Q09428 1581 aa31.89■■■□□ 2.7
VDR-205ENST00000548664 DNMBPQ6XZF7 1577 aa31.87■■■□□ 2.69
VDR-205ENST00000548664 CHD1O14646 1710 aa31.84■■■□□ 2.69
VDR-205ENST00000548664 TARBP1Q13395 1621 aaKnown RBP31.81■■■□□ 2.68
VDR-205ENST00000548664 AQRO60306 1485 aaKnown RBP eCLIP31.72■■■□□ 2.67
VDR-205ENST00000548664 CYB5RLQ6IPT4 315 aa31.66■■■□□ 2.66
VDR-205ENST00000548664 POLA1P09884 1462 aaPredicted RBP31.65■■■□□ 2.66
VDR-205ENST00000548664 ARAP1Q96P48 1450 aa31.63■■■□□ 2.65
VDR-205ENST00000548664 RAD54L2Q9Y4B4 1467 aa31.52■■■□□ 2.64
VDR-205ENST00000548664 FBLN2P98095 1184 aa31.52■■■□□ 2.64
VDR-205ENST00000548664 WDR97A6NE52 1622 aa31.46■■■□□ 2.63
VDR-205ENST00000548664 SOGA1O94964 1423 aa31.45■■■□□ 2.63
VDR-205ENST00000548664 TRHP20396 242 aaPredicted RBP31.44■■■□□ 2.62
VDR-205ENST00000548664 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
VDR-205ENST00000548664 CLASP1Q7Z460 1538 aa31.42■■■□□ 2.62
VDR-205ENST00000548664 SNAPC4Q5SXM2 1469 aa31.41■■■□□ 2.62
VDR-205ENST00000548664 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
VDR-205ENST00000548664 SYNJ1O43426 1573 aa31.33■■■□□ 2.61
VDR-205ENST00000548664 MAGI1Q96QZ7 1491 aaPredicted RBP31.32■■■□□ 2.6
VDR-205ENST00000548664 CUX1P39880 1505 aa31.31■■■□□ 2.6
VDR-205ENST00000548664 GRIN2BQ13224 1484 aa31.25■■■□□ 2.59
VDR-205ENST00000548664 CHMP7Q8WUX9 453 aaPredicted RBP31.24■■■□□ 2.59
VDR-205ENST00000548664 PBRM1Q86U86 1689 aa31.22■■■□□ 2.59
VDR-205ENST00000548664 SYNJ2O15056 1496 aa31.22■■■□□ 2.59
VDR-205ENST00000548664 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
VDR-205ENST00000548664 ABCA5Q8WWZ7 1642 aa31.07■■■□□ 2.56
VDR-205ENST00000548664 ABCA10Q8WWZ4 1543 aa31.01■■■□□ 2.55
VDR-205ENST00000548664 ERCC6L2Q5T890 1561 aa30.88■■■□□ 2.53
VDR-205ENST00000548664 GRIN2AQ12879 1464 aa30.88■■■□□ 2.53
VDR-205ENST00000548664 ADAMTS12P58397 1594 aa30.85■■■□□ 2.53
VDR-205ENST00000548664 CEP170Q5SW79 1584 aa30.83■■■□□ 2.53
VDR-205ENST00000548664 AEBP2Q6ZN18 517 aaPredicted RBP30.81■■■□□ 2.52
VDR-205ENST00000548664 NUP160Q12769 1436 aa30.79■■■□□ 2.52
VDR-205ENST00000548664 SHROOM2Q13796 1616 aa30.77■■■□□ 2.52
VDR-205ENST00000548664 WRNQ14191 1432 aaPredicted RBP eCLIP30.76■■■□□ 2.51
VDR-205ENST00000548664 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.51
VDR-205ENST00000548664 TOP2BQ02880 1626 aa30.72■■■□□ 2.51
VDR-205ENST00000548664 FHAD1B1AJZ9 1412 aa30.66■■■□□ 2.5
VDR-205ENST00000548664 KIF13AQ9H1H9 1805 aa30.63■■■□□ 2.49
VDR-205ENST00000548664 ERICH3Q5RHP9 1530 aa30.63■■■□□ 2.49
VDR-205ENST00000548664 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
VDR-205ENST00000548664 PRG4Q92954 1404 aaPredicted RBP30.48■■■□□ 2.47
VDR-205ENST00000548664 RUSC2Q8N2Y8 1516 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms