RNA–Protein interactions for RNA: ENST00000548598.5

RACGAP1-213, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-213ENST00000548598 NISCHQ9Y2I1 1504 aa42.19■■■■■ 4.34
RACGAP1-213ENST00000548598 CCDC180Q9P1Z9 1646 aa37.78■■■■□ 3.64
RACGAP1-213ENST00000548598 ABCC9O60706 1549 aa37.26■■■■□ 3.56
RACGAP1-213ENST00000548598 RB1CC1Q8TDY2 1594 aa35.72■■■■□ 3.31
RACGAP1-213ENST00000548598 NACADO15069 1562 aa35.58■■■■□ 3.29
RACGAP1-213ENST00000548598 MYO15BQ96JP2 1530 aa35.28■■■■□ 3.24
RACGAP1-213ENST00000548598 DCAF8L2P0C7V8 631 aa35.16■■■■□ 3.22
RACGAP1-213ENST00000548598 ZCCHC6Q5VYS8 1495 aaKnown RBP35.09■■■■□ 3.21
RACGAP1-213ENST00000548598 UNC13AQ9UPW8 1703 aa34.97■■■■□ 3.19
RACGAP1-213ENST00000548598 DCAF1Q9Y4B6 1507 aa34.95■■■■□ 3.19
RACGAP1-213ENST00000548598 BICRAQ9NZM4 1560 aa34.7■■■■□ 3.15
RACGAP1-213ENST00000548598 PABPN1Q86U42 306 aaKnown RBP eCLIP34.66■■■■□ 3.14
RACGAP1-213ENST00000548598 DNAJC5BQ9UF47 199 aa34.6■■■■□ 3.13
RACGAP1-213ENST00000548598 SHROOM4Q9ULL8 1493 aa34.34■■■■□ 3.09
RACGAP1-213ENST00000548598 SCRIBQ14160 1630 aa34.33■■■■□ 3.09
RACGAP1-213ENST00000548598 EIF4G1Q04637 1599 aaKnown RBP33.8■■■■□ 3
RACGAP1-213ENST00000548598 CC2D2AQ9P2K1 1620 aa33.75■■■□□ 2.99
RACGAP1-213ENST00000548598 CECR2Q9BXF3 1484 aa33.56■■■□□ 2.96
RACGAP1-213ENST00000548598 SMARCA4P51532 1647 aa32.85■■■□□ 2.85
RACGAP1-213ENST00000548598 NCAPD3P42695 1498 aa32.83■■■□□ 2.85
RACGAP1-213ENST00000548598 ATAD2BQ9ULI0 1458 aa32.76■■■□□ 2.84
RACGAP1-213ENST00000548598 BAZ1AQ9NRL2 1556 aaPredicted RBP32.74■■■□□ 2.83
RACGAP1-213ENST00000548598 SMARCA2P51531 1590 aa32.7■■■□□ 2.83
RACGAP1-213ENST00000548598 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
RACGAP1-213ENST00000548598 PEG3Q9GZU2 1588 aa32.6■■■□□ 2.81
RACGAP1-213ENST00000548598 MROH2BQ7Z745 1585 aa32.49■■■□□ 2.79
RACGAP1-213ENST00000548598 BAZ1BQ9UIG0 1483 aaKnown RBP32.44■■■□□ 2.78
RACGAP1-213ENST00000548598 ERCC6Q03468 1493 aa32.14■■■□□ 2.74
RACGAP1-213ENST00000548598 NESP48681 1621 aa32.14■■■□□ 2.74
RACGAP1-213ENST00000548598 WIZO95785 1651 aa32.11■■■□□ 2.73
RACGAP1-213ENST00000548598 CUX2O14529 1486 aa32.06■■■□□ 2.72
RACGAP1-213ENST00000548598 LAMC3Q9Y6N6 1575 aa32.05■■■□□ 2.72
RACGAP1-213ENST00000548598 RSF1Q96T23 1441 aaPredicted RBP31.93■■■□□ 2.7
RACGAP1-213ENST00000548598 THOC2Q8NI27 1593 aaKnown RBP31.85■■■□□ 2.69
RACGAP1-213ENST00000548598 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
RACGAP1-213ENST00000548598 CADPSQ9ULU8 1353 aa31.8■■■□□ 2.68
RACGAP1-213ENST00000548598 PDS5BQ9NTI5 1447 aa31.78■■■□□ 2.68
RACGAP1-213ENST00000548598 TOP2AP11388 1531 aaKnown RBP31.78■■■□□ 2.68
RACGAP1-213ENST00000548598 CFTRP13569 1480 aa31.56■■■□□ 2.64
RACGAP1-213ENST00000548598 DNAJC5Q9H3Z4 198 aa31.52■■■□□ 2.64
RACGAP1-213ENST00000548598 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
RACGAP1-213ENST00000548598 WDR62O43379 1518 aa31.49■■■□□ 2.63
RACGAP1-213ENST00000548598 CEP164Q9UPV0 1460 aa31.46■■■□□ 2.63
RACGAP1-213ENST00000548598 FANCD2Q9BXW9 1451 aa31.45■■■□□ 2.62
RACGAP1-213ENST00000548598 PRDM2Q13029 1718 aa31.35■■■□□ 2.61
RACGAP1-213ENST00000548598 CCDC88BA6NC98 1476 aa31.34■■■□□ 2.61
RACGAP1-213ENST00000548598 URB2Q14146 1524 aaKnown RBP31.19■■■□□ 2.58
RACGAP1-213ENST00000548598 TOPBP1Q92547 1522 aa30.91■■■□□ 2.54
RACGAP1-213ENST00000548598 ABCC8Q09428 1581 aa30.87■■■□□ 2.53
RACGAP1-213ENST00000548598 DNMBPQ6XZF7 1577 aa30.86■■■□□ 2.53
RACGAP1-213ENST00000548598 IFT140Q96RY7 1462 aa30.82■■■□□ 2.53
RACGAP1-213ENST00000548598 ZNF608Q9ULD9 1512 aaPredicted RBP30.71■■■□□ 2.51
RACGAP1-213ENST00000548598 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
RACGAP1-213ENST00000548598 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
RACGAP1-213ENST00000548598 EIF4G3O43432 1585 aaKnown RBP30.62■■■□□ 2.49
RACGAP1-213ENST00000548598 SUPT5HO00267 1087 aaKnown RBP30.58■■■□□ 2.49
RACGAP1-213ENST00000548598 CUX1P39880 1505 aa30.52■■■□□ 2.48
RACGAP1-213ENST00000548598 OSCARQ8IYS5 282 aa30.51■■■□□ 2.47
RACGAP1-213ENST00000548598 FGD5Q6ZNL6 1462 aa30.46■■■□□ 2.47
RACGAP1-213ENST00000548598 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
RACGAP1-213ENST00000548598 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.461e-6■■■□□ 15.3
RACGAP1-213ENST00000548598 WDR97A6NE52 1622 aa30.43■■■□□ 2.46
RACGAP1-213ENST00000548598 SOGA1O94964 1423 aa30.41■■■□□ 2.46
RACGAP1-213ENST00000548598 CHD1O14646 1710 aa30.31■■■□□ 2.44
RACGAP1-213ENST00000548598 TDRD9Q8NDG6 1382 aaKnown RBP30.28■■■□□ 2.44
RACGAP1-213ENST00000548598 RIMBP3CA6NJZ7 1639 aa30.2■■■□□ 2.43
RACGAP1-213ENST00000548598 RIMBP3BA6NNM3 1639 aa30.2■■■□□ 2.43
RACGAP1-213ENST00000548598 RIMBP3Q9UFD9 1639 aa30.2■■■□□ 2.43
RACGAP1-213ENST00000548598 SNAPC4Q5SXM2 1469 aa30.19■■■□□ 2.42
RACGAP1-213ENST00000548598 TRIM41Q8WV44 630 aa30.18■■■□□ 2.42
RACGAP1-213ENST00000548598 BIVM-ERCC5R4GMW8 1640 aa30.18■■■□□ 2.42
RACGAP1-213ENST00000548598 ABCA10Q8WWZ4 1543 aa30.17■■■□□ 2.42
RACGAP1-213ENST00000548598 GRIN2BQ13224 1484 aa30.16■■■□□ 2.42
RACGAP1-213ENST00000548598 MAGI1Q96QZ7 1491 aaPredicted RBP30.16■■■□□ 2.42
RACGAP1-213ENST00000548598 TOP2BQ02880 1626 aa30.15■■■□□ 2.42
RACGAP1-213ENST00000548598 ARHGEF11O15085 1522 aa30.14■■■□□ 2.42
RACGAP1-213ENST00000548598 ABCA5Q8WWZ7 1642 aa30.14■■■□□ 2.41
RACGAP1-213ENST00000548598 PBRM1Q86U86 1689 aa30.13■■■□□ 2.41
RACGAP1-213ENST00000548598 WRNQ14191 1432 aaPredicted RBP eCLIP30.11■■■□□ 2.41
RACGAP1-213ENST00000548598 SYNJ1O43426 1573 aa30.11■■■□□ 2.41
RACGAP1-213ENST00000548598 GAPVD1Q14C86 1478 aa30.09■■■□□ 2.41
RACGAP1-213ENST00000548598 FBLN2P98095 1184 aa30.04■■■□□ 2.4
RACGAP1-213ENST00000548598 SYNJ2O15056 1496 aa30.04■■■□□ 2.4
RACGAP1-213ENST00000548598 CLASP1Q7Z460 1538 aa30.01■■■□□ 2.4
RACGAP1-213ENST00000548598 CHMP7Q8WUX9 453 aaPredicted RBP29.93■■■□□ 2.38
RACGAP1-213ENST00000548598 ARAP1Q96P48 1450 aa29.87■■■□□ 2.37
RACGAP1-213ENST00000548598 ADAMTS12P58397 1594 aa29.87■■■□□ 2.37
RACGAP1-213ENST00000548598 ERICH3Q5RHP9 1530 aa29.81■■■□□ 2.36
RACGAP1-213ENST00000548598 GRIN2AQ12879 1464 aa29.8■■■□□ 2.36
RACGAP1-213ENST00000548598 CYB5RLQ6IPT4 315 aa29.74■■■□□ 2.35
RACGAP1-213ENST00000548598 FHAD1B1AJZ9 1412 aa29.73■■■□□ 2.35
RACGAP1-213ENST00000548598 NUP160Q12769 1436 aa29.71■■■□□ 2.35
RACGAP1-213ENST00000548598 CEP170Q5SW79 1584 aa29.69■■■□□ 2.34
RACGAP1-213ENST00000548598 SHROOM2Q13796 1616 aa29.57■■■□□ 2.32
RACGAP1-213ENST00000548598 ERCC6L2Q5T890 1561 aa29.51■■■□□ 2.31
RACGAP1-213ENST00000548598 KIF27Q86VH2 1401 aa29.5■■■□□ 2.31
RACGAP1-213ENST00000548598 CUL7Q14999 1698 aa29.46■■■□□ 2.31
RACGAP1-213ENST00000548598 RUSC2Q8N2Y8 1516 aa29.45■■■□□ 2.31
RACGAP1-213ENST00000548598 IGF1RP08069 1367 aa29.43■■■□□ 2.3
RACGAP1-213ENST00000548598 PRG4Q92954 1404 aaPredicted RBP29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms