RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 NISCHQ9Y2I1 1504 aa41.75■■■■■ 4.27
SSH1-208ENST00000548522 ABCC9O60706 1549 aa37.78■■■■□ 3.64
SSH1-208ENST00000548522 CCDC180Q9P1Z9 1646 aa37.48■■■■□ 3.59
SSH1-208ENST00000548522 RB1CC1Q8TDY2 1594 aa35.77■■■■□ 3.32
SSH1-208ENST00000548522 DNAJC5BQ9UF47 199 aa35.64■■■■□ 3.3
SSH1-208ENST00000548522 NACADO15069 1562 aa35.48■■■■□ 3.27
SSH1-208ENST00000548522 DCAF8L2P0C7V8 631 aa35.3■■■■□ 3.24
SSH1-208ENST00000548522 PABPN1Q86U42 306 aaKnown RBP eCLIP35.15■■■■□ 3.22
SSH1-208ENST00000548522 UNC13AQ9UPW8 1703 aa35■■■■□ 3.19
SSH1-208ENST00000548522 MYO15BQ96JP2 1530 aa34.91■■■■□ 3.18
SSH1-208ENST00000548522 BICRAQ9NZM4 1560 aa34.84■■■■□ 3.17
SSH1-208ENST00000548522 ZCCHC6Q5VYS8 1495 aaKnown RBP34.59■■■■□ 3.13
SSH1-208ENST00000548522 DCAF1Q9Y4B6 1507 aa34.41■■■■□ 3.1
SSH1-208ENST00000548522 SCRIBQ14160 1630 aa34.26■■■■□ 3.07
SSH1-208ENST00000548522 SHROOM4Q9ULL8 1493 aa34.23■■■■□ 3.07
SSH1-208ENST00000548522 CC2D2AQ9P2K1 1620 aa34.08■■■■□ 3.05
SSH1-208ENST00000548522 CECR2Q9BXF3 1484 aa34.02■■■■□ 3.04
SSH1-208ENST00000548522 EIF4G1Q04637 1599 aaKnown RBP33.97■■■■□ 3.03
SSH1-208ENST00000548522 NCAPD3P42695 1498 aa32.79■■■□□ 2.84
SSH1-208ENST00000548522 DNAJC5Q9H3Z4 198 aa32.74■■■□□ 2.83
SSH1-208ENST00000548522 ATAD2BQ9ULI0 1458 aa32.7■■■□□ 2.83
SSH1-208ENST00000548522 SMARCA4P51532 1647 aa32.62■■■□□ 2.81
SSH1-208ENST00000548522 ERCC6Q03468 1493 aa32.58■■■□□ 2.81
SSH1-208ENST00000548522 CUX2O14529 1486 aa32.55■■■□□ 2.8
SSH1-208ENST00000548522 SMARCA2P51531 1590 aa32.53■■■□□ 2.8
SSH1-208ENST00000548522 HMGXB3Q12766 1538 aa32.53■■■□□ 2.8
SSH1-208ENST00000548522 NESP48681 1621 aa32.43■■■□□ 2.78
SSH1-208ENST00000548522 BAZ1AQ9NRL2 1556 aaPredicted RBP32.39■■■□□ 2.78
SSH1-208ENST00000548522 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
SSH1-208ENST00000548522 PEG3Q9GZU2 1588 aa32.27■■■□□ 2.76
SSH1-208ENST00000548522 MROH2BQ7Z745 1585 aa32.22■■■□□ 2.75
SSH1-208ENST00000548522 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
SSH1-208ENST00000548522 LAMC3Q9Y6N6 1575 aa32.06■■■□□ 2.72
SSH1-208ENST00000548522 KIF21AQ7Z4S6 1674 aa31.95■■■□□ 2.7
SSH1-208ENST00000548522 PDS5BQ9NTI5 1447 aa31.87■■■□□ 2.69
SSH1-208ENST00000548522 WIZO95785 1651 aa31.8■■■□□ 2.68
SSH1-208ENST00000548522 CADPSQ9ULU8 1353 aa31.79■■■□□ 2.68
SSH1-208ENST00000548522 MRC2Q9UBG0 1479 aa31.66■■■□□ 2.66
SSH1-208ENST00000548522 WDR62O43379 1518 aa31.6■■■□□ 2.65
SSH1-208ENST00000548522 CEP164Q9UPV0 1460 aa31.49■■■□□ 2.63
SSH1-208ENST00000548522 RSF1Q96T23 1441 aaPredicted RBP31.46■■■□□ 2.63
SSH1-208ENST00000548522 FANCD2Q9BXW9 1451 aa31.46■■■□□ 2.63
SSH1-208ENST00000548522 CFTRP13569 1480 aa31.4■■■□□ 2.62
SSH1-208ENST00000548522 TOP2AP11388 1531 aaKnown RBP31.37■■■□□ 2.61
SSH1-208ENST00000548522 TRIM41Q8WV44 630 aa31.3■■■□□ 2.6
SSH1-208ENST00000548522 URB2Q14146 1524 aaKnown RBP31.25■■■□□ 2.59
SSH1-208ENST00000548522 CCDC88BA6NC98 1476 aa31.03■■■□□ 2.56
SSH1-208ENST00000548522 PRDM2Q13029 1718 aa30.99■■■□□ 2.55
SSH1-208ENST00000548522 OSCARQ8IYS5 282 aa30.99■■■□□ 2.55
SSH1-208ENST00000548522 ZNF608Q9ULD9 1512 aaPredicted RBP30.92■■■□□ 2.54
SSH1-208ENST00000548522 IFT140Q96RY7 1462 aa30.85■■■□□ 2.53
SSH1-208ENST00000548522 TOPBP1Q92547 1522 aa30.84■■■□□ 2.53
SSH1-208ENST00000548522 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
SSH1-208ENST00000548522 RIMBP3CA6NJZ7 1639 aa30.7■■■□□ 2.51
SSH1-208ENST00000548522 RIMBP3BA6NNM3 1639 aa30.7■■■□□ 2.51
SSH1-208ENST00000548522 RIMBP3Q9UFD9 1639 aa30.7■■■□□ 2.51
SSH1-208ENST00000548522 DNMBPQ6XZF7 1577 aa30.7■■■□□ 2.5
SSH1-208ENST00000548522 ABCC8Q09428 1581 aa30.64■■■□□ 2.5
SSH1-208ENST00000548522 ARHGEF11O15085 1522 aa30.6■■■□□ 2.49
SSH1-208ENST00000548522 TARBP1Q13395 1621 aaKnown RBP30.58■■■□□ 2.49
SSH1-208ENST00000548522 AQRO60306 1485 aaKnown RBP eCLIP30.57■■■□□ 2.48
SSH1-208ENST00000548522 POLA1P09884 1462 aaPredicted RBP30.54■■■□□ 2.48
SSH1-208ENST00000548522 CHD1O14646 1710 aa30.47■■■□□ 2.47
SSH1-208ENST00000548522 RAD54L2Q9Y4B4 1467 aa30.45■■■□□ 2.47
SSH1-208ENST00000548522 FBLN2P98095 1184 aa30.37■■■□□ 2.45
SSH1-208ENST00000548522 TDRD9Q8NDG6 1382 aaKnown RBP30.36■■■□□ 2.45
SSH1-208ENST00000548522 CYB5RLQ6IPT4 315 aa30.35■■■□□ 2.45
SSH1-208ENST00000548522 SOGA1O94964 1423 aa30.34■■■□□ 2.45
SSH1-208ENST00000548522 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
SSH1-208ENST00000548522 ARAP1Q96P48 1450 aa30.31■■■□□ 2.44
SSH1-208ENST00000548522 CUX1P39880 1505 aa30.28■■■□□ 2.44
SSH1-208ENST00000548522 SNAPC4Q5SXM2 1469 aa30.27■■■□□ 2.44
SSH1-208ENST00000548522 WDR97A6NE52 1622 aa30.16■■■□□ 2.42
SSH1-208ENST00000548522 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
SSH1-208ENST00000548522 MAGI1Q96QZ7 1491 aaPredicted RBP30.12■■■□□ 2.41
SSH1-208ENST00000548522 GRIN2BQ13224 1484 aa30.1■■■□□ 2.41
SSH1-208ENST00000548522 CHMP7Q8WUX9 453 aaPredicted RBP30.07■■■□□ 2.4
SSH1-208ENST00000548522 TRHP20396 242 aaPredicted RBP30.05■■■□□ 2.4
SSH1-208ENST00000548522 SYNJ1O43426 1573 aa30.05■■■□□ 2.4
SSH1-208ENST00000548522 SYNJ2O15056 1496 aa30.03■■■□□ 2.4
SSH1-208ENST00000548522 GAPVD1Q14C86 1478 aa29.98■■■□□ 2.39
SSH1-208ENST00000548522 PBRM1Q86U86 1689 aa29.98■■■□□ 2.39
SSH1-208ENST00000548522 ABCA5Q8WWZ7 1642 aa29.93■■■□□ 2.38
SSH1-208ENST00000548522 ABCA10Q8WWZ4 1543 aa29.92■■■□□ 2.38
SSH1-208ENST00000548522 SUPT5HO00267 1087 aaKnown RBP29.92■■■□□ 2.38
SSH1-208ENST00000548522 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
SSH1-208ENST00000548522 WRNQ14191 1432 aaPredicted RBP eCLIP29.74■■■□□ 2.359e-6■■■■■ 50.1
SSH1-208ENST00000548522 ERCC6L2Q5T890 1561 aa29.73■■■□□ 2.35
SSH1-208ENST00000548522 ADAMTS12P58397 1594 aa29.73■■■□□ 2.35
SSH1-208ENST00000548522 TOP2BQ02880 1626 aa29.69■■■□□ 2.34
SSH1-208ENST00000548522 CEP170Q5SW79 1584 aa29.69■■■□□ 2.34
SSH1-208ENST00000548522 BIVM-ERCC5R4GMW8 1640 aa29.68■■■□□ 2.34
SSH1-208ENST00000548522 NUP160Q12769 1436 aa29.65■■■□□ 2.34
SSH1-208ENST00000548522 FHAD1B1AJZ9 1412 aa29.58■■■□□ 2.33
SSH1-208ENST00000548522 SHROOM2Q13796 1616 aa29.53■■■□□ 2.32
SSH1-208ENST00000548522 ERICH3Q5RHP9 1530 aa29.52■■■□□ 2.32
SSH1-208ENST00000548522 PRG4Q92954 1404 aaPredicted RBP29.37■■■□□ 2.29
SSH1-208ENST00000548522 RUSC2Q8N2Y8 1516 aa29.32■■■□□ 2.28
SSH1-208ENST00000548522 JPH4Q96JJ6 628 aa29.29■■■□□ 2.28
SSH1-208ENST00000548522 AEBP2Q6ZN18 517 aaPredicted RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms