RNA–Protein interactions for RNA: ENST00000548350.1

ASIC1-204, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 4

Gene ASIC1, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-204ENST00000548350 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.68
ASIC1-204ENST00000548350 ABCC9O60706 1549 aa23.18■■□□□ 1.3
ASIC1-204ENST00000548350 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
ASIC1-204ENST00000548350 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
ASIC1-204ENST00000548350 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
ASIC1-204ENST00000548350 DCAF8L2P0C7V8 631 aa21.68■■□□□ 1.06
ASIC1-204ENST00000548350 PABPN1Q86U42 306 aaKnown RBP eCLIP21.62■■□□□ 1.05
ASIC1-204ENST00000548350 NACADO15069 1562 aa21.61■■□□□ 1.05
ASIC1-204ENST00000548350 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
ASIC1-204ENST00000548350 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
ASIC1-204ENST00000548350 ZCCHC6Q5VYS8 1495 aaKnown RBP21.24■□□□□ 0.99
ASIC1-204ENST00000548350 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
ASIC1-204ENST00000548350 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.97
ASIC1-204ENST00000548350 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
ASIC1-204ENST00000548350 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
ASIC1-204ENST00000548350 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
ASIC1-204ENST00000548350 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
ASIC1-204ENST00000548350 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
ASIC1-204ENST00000548350 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
ASIC1-204ENST00000548350 ERCC6Q03468 1493 aa20.04■□□□□ 0.8
ASIC1-204ENST00000548350 CUX2O14529 1486 aa20.01■□□□□ 0.79
ASIC1-204ENST00000548350 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
ASIC1-204ENST00000548350 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
ASIC1-204ENST00000548350 BAZ1AQ9NRL2 1556 aaPredicted RBP19.86■□□□□ 0.77
ASIC1-204ENST00000548350 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
ASIC1-204ENST00000548350 NESP48681 1621 aa19.83■□□□□ 0.76
ASIC1-204ENST00000548350 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
ASIC1-204ENST00000548350 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
ASIC1-204ENST00000548350 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
ASIC1-204ENST00000548350 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
ASIC1-204ENST00000548350 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
ASIC1-204ENST00000548350 THOC2Q8NI27 1593 aaKnown RBP19.59■□□□□ 0.73
ASIC1-204ENST00000548350 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
ASIC1-204ENST00000548350 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
ASIC1-204ENST00000548350 TRIM41Q8WV44 630 aa19.49■□□□□ 0.71
ASIC1-204ENST00000548350 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
ASIC1-204ENST00000548350 WIZO95785 1651 aa19.47■□□□□ 0.71
ASIC1-204ENST00000548350 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
ASIC1-204ENST00000548350 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
ASIC1-204ENST00000548350 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
ASIC1-204ENST00000548350 TOP2AP11388 1531 aaKnown RBP19.28■□□□□ 0.68
ASIC1-204ENST00000548350 WDR62O43379 1518 aa19.27■□□□□ 0.68
ASIC1-204ENST00000548350 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
ASIC1-204ENST00000548350 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
ASIC1-204ENST00000548350 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
ASIC1-204ENST00000548350 CFTRP13569 1480 aa19.09■□□□□ 0.65
ASIC1-204ENST00000548350 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
ASIC1-204ENST00000548350 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
ASIC1-204ENST00000548350 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
ASIC1-204ENST00000548350 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
ASIC1-204ENST00000548350 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
ASIC1-204ENST00000548350 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
ASIC1-204ENST00000548350 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
ASIC1-204ENST00000548350 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
ASIC1-204ENST00000548350 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
ASIC1-204ENST00000548350 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
ASIC1-204ENST00000548350 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
ASIC1-204ENST00000548350 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.6
ASIC1-204ENST00000548350 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
ASIC1-204ENST00000548350 FBLN2P98095 1184 aa18.71■□□□□ 0.59
ASIC1-204ENST00000548350 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.58
ASIC1-204ENST00000548350 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
ASIC1-204ENST00000548350 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
ASIC1-204ENST00000548350 DNMBPQ6XZF7 1577 aa18.65■□□□□ 0.58
ASIC1-204ENST00000548350 CHD1O14646 1710 aa18.6■□□□□ 0.57
ASIC1-204ENST00000548350 ARAP1Q96P48 1450 aa18.59■□□□□ 0.57
ASIC1-204ENST00000548350 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
ASIC1-204ENST00000548350 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
ASIC1-204ENST00000548350 RAD54L2Q9Y4B4 1467 aa18.56■□□□□ 0.56
ASIC1-204ENST00000548350 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
ASIC1-204ENST00000548350 SOGA1O94964 1423 aa18.51■□□□□ 0.55
ASIC1-204ENST00000548350 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
ASIC1-204ENST00000548350 CUX1P39880 1505 aa18.47■□□□□ 0.55
ASIC1-204ENST00000548350 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
ASIC1-204ENST00000548350 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
ASIC1-204ENST00000548350 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
ASIC1-204ENST00000548350 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
ASIC1-204ENST00000548350 SYNJ1O43426 1573 aa18.36■□□□□ 0.53
ASIC1-204ENST00000548350 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
ASIC1-204ENST00000548350 GRIN2BQ13224 1484 aa18.35■□□□□ 0.53
ASIC1-204ENST00000548350 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
ASIC1-204ENST00000548350 AEBP2Q6ZN18 517 aaPredicted RBP18.33■□□□□ 0.52
ASIC1-204ENST00000548350 SYNJ2O15056 1496 aa18.32■□□□□ 0.52
ASIC1-204ENST00000548350 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
ASIC1-204ENST00000548350 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
ASIC1-204ENST00000548350 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
ASIC1-204ENST00000548350 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.52
ASIC1-204ENST00000548350 PBRM1Q86U86 1689 aa18.2■□□□□ 0.5
ASIC1-204ENST00000548350 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
ASIC1-204ENST00000548350 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
ASIC1-204ENST00000548350 GRIN2AQ12879 1464 aa18.11■□□□□ 0.49
ASIC1-204ENST00000548350 ERICH3Q5RHP9 1530 aa18.07■□□□□ 0.48
ASIC1-204ENST00000548350 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
ASIC1-204ENST00000548350 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
ASIC1-204ENST00000548350 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
ASIC1-204ENST00000548350 NUP160Q12769 1436 aa18.05■□□□□ 0.48
ASIC1-204ENST00000548350 ADAMTS12P58397 1594 aa18.04■□□□□ 0.48
ASIC1-204ENST00000548350 PRG4Q92954 1404 aaPredicted RBP17.96■□□□□ 0.47
ASIC1-204ENST00000548350 IGF1RP08069 1367 aa17.95■□□□□ 0.46
ASIC1-204ENST00000548350 SHROOM2Q13796 1616 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms