RNA–Protein interactions for RNA: ENST00000548348.1

PCED1B-203, Transcript of PC-esterase domain containing 1B, humanhuman

TSL 5

Gene PCED1B, Length 723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-203ENST00000548348 NISCHQ9Y2I1 1504 aa38.53■■■■□ 3.76
PCED1B-203ENST00000548348 ABCC9O60706 1549 aa34.65■■■■□ 3.14
PCED1B-203ENST00000548348 CCDC180Q9P1Z9 1646 aa34.59■■■■□ 3.13
PCED1B-203ENST00000548348 RB1CC1Q8TDY2 1594 aa33■■■□□ 2.87
PCED1B-203ENST00000548348 NACADO15069 1562 aa32.79■■■□□ 2.84
PCED1B-203ENST00000548348 DNAJC5BQ9UF47 199 aa32.64■■■□□ 2.82
PCED1B-203ENST00000548348 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
PCED1B-203ENST00000548348 MYO15BQ96JP2 1530 aa32.4■■■□□ 2.78
PCED1B-203ENST00000548348 PABPN1Q86U42 306 aaKnown RBP eCLIP32.25■■■□□ 2.75
PCED1B-203ENST00000548348 UNC13AQ9UPW8 1703 aa32.08■■■□□ 2.73
PCED1B-203ENST00000548348 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
PCED1B-203ENST00000548348 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
PCED1B-203ENST00000548348 DCAF1Q9Y4B6 1507 aa31.91■■■□□ 2.7
PCED1B-203ENST00000548348 SHROOM4Q9ULL8 1493 aa31.74■■■□□ 2.67
PCED1B-203ENST00000548348 SCRIBQ14160 1630 aa31.42■■■□□ 2.62
PCED1B-203ENST00000548348 CC2D2AQ9P2K1 1620 aa31.3■■■□□ 2.6
PCED1B-203ENST00000548348 CECR2Q9BXF3 1484 aa31.28■■■□□ 2.6
PCED1B-203ENST00000548348 EIF4G1Q04637 1599 aaKnown RBP31.25■■■□□ 2.59
PCED1B-203ENST00000548348 NCAPD3P42695 1498 aa30.31■■■□□ 2.44
PCED1B-203ENST00000548348 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
PCED1B-203ENST00000548348 DNAJC5Q9H3Z4 198 aa30.14■■■□□ 2.42
PCED1B-203ENST00000548348 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
PCED1B-203ENST00000548348 HMGXB3Q12766 1538 aa30.04■■■□□ 2.4
PCED1B-203ENST00000548348 CUX2O14529 1486 aa30.03■■■□□ 2.4
PCED1B-203ENST00000548348 SMARCA4P51532 1647 aa30.03■■■□□ 2.4
PCED1B-203ENST00000548348 ERCC6Q03468 1493 aa29.95■■■□□ 2.39
PCED1B-203ENST00000548348 BAZ1AQ9NRL2 1556 aaPredicted RBP29.92■■■□□ 2.38
PCED1B-203ENST00000548348 PEG3Q9GZU2 1588 aa29.83■■■□□ 2.37
PCED1B-203ENST00000548348 BAZ1BQ9UIG0 1483 aaKnown RBP29.82■■■□□ 2.36
PCED1B-203ENST00000548348 NESP48681 1621 aa29.72■■■□□ 2.35
PCED1B-203ENST00000548348 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.33
PCED1B-203ENST00000548348 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
PCED1B-203ENST00000548348 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
PCED1B-203ENST00000548348 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
PCED1B-203ENST00000548348 CADPSQ9ULU8 1353 aa29.38■■■□□ 2.29
PCED1B-203ENST00000548348 KIF21AQ7Z4S6 1674 aa29.27■■■□□ 2.28
PCED1B-203ENST00000548348 WIZO95785 1651 aa29.21■■■□□ 2.27
PCED1B-203ENST00000548348 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
PCED1B-203ENST00000548348 WDR62O43379 1518 aa29.1■■■□□ 2.25
PCED1B-203ENST00000548348 RSF1Q96T23 1441 aaPredicted RBP29.04■■■□□ 2.24
PCED1B-203ENST00000548348 CFTRP13569 1480 aa29.01■■■□□ 2.23
PCED1B-203ENST00000548348 CEP164Q9UPV0 1460 aa29.01■■■□□ 2.23
PCED1B-203ENST00000548348 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
PCED1B-203ENST00000548348 TOP2AP11388 1531 aaKnown RBP28.93■■■□□ 2.22
PCED1B-203ENST00000548348 URB2Q14146 1524 aaKnown RBP28.72■■■□□ 2.19
PCED1B-203ENST00000548348 OSCARQ8IYS5 282 aa28.63■■■□□ 2.17
PCED1B-203ENST00000548348 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
PCED1B-203ENST00000548348 CCDC88BA6NC98 1476 aa28.6■■■□□ 2.17
PCED1B-203ENST00000548348 PRDM2Q13029 1718 aa28.53■■■□□ 2.16
PCED1B-203ENST00000548348 IFT140Q96RY7 1462 aa28.48■■■□□ 2.15
PCED1B-203ENST00000548348 ABCC8Q09428 1581 aa28.42■■■□□ 2.14
PCED1B-203ENST00000548348 TOPBP1Q92547 1522 aa28.41■■■□□ 2.14
PCED1B-203ENST00000548348 ZNF608Q9ULD9 1512 aaPredicted RBP28.37■■■□□ 2.13
PCED1B-203ENST00000548348 DNMBPQ6XZF7 1577 aa28.29■■■□□ 2.12
PCED1B-203ENST00000548348 EIF4G3O43432 1585 aaKnown RBP28.18■■■□□ 2.1
PCED1B-203ENST00000548348 RIMBP3CA6NJZ7 1639 aa28.15■■■□□ 2.1
PCED1B-203ENST00000548348 RIMBP3BA6NNM3 1639 aa28.15■■■□□ 2.1
PCED1B-203ENST00000548348 RIMBP3Q9UFD9 1639 aa28.15■■■□□ 2.1
PCED1B-203ENST00000548348 TARBP1Q13395 1621 aaKnown RBP28.14■■■□□ 2.1
PCED1B-203ENST00000548348 AQRO60306 1485 aaKnown RBP eCLIP28.12■■■□□ 2.09
PCED1B-203ENST00000548348 POLA1P09884 1462 aaPredicted RBP28.12■■■□□ 2.09
PCED1B-203ENST00000548348 ARHGEF11O15085 1522 aa28.11■■■□□ 2.09
PCED1B-203ENST00000548348 SOGA1O94964 1423 aa28.01■■■□□ 2.07
PCED1B-203ENST00000548348 RAD54L2Q9Y4B4 1467 aa27.97■■■□□ 2.07
PCED1B-203ENST00000548348 WDR97A6NE52 1622 aa27.95■■■□□ 2.06
PCED1B-203ENST00000548348 TDRD9Q8NDG6 1382 aaKnown RBP27.93■■■□□ 2.06
PCED1B-203ENST00000548348 CHD1O14646 1710 aa27.92■■■□□ 2.06
PCED1B-203ENST00000548348 FBLN2P98095 1184 aa27.91■■■□□ 2.06
PCED1B-203ENST00000548348 CYB5RLQ6IPT4 315 aa27.9■■■□□ 2.06
PCED1B-203ENST00000548348 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.06
PCED1B-203ENST00000548348 CUX1P39880 1505 aa27.86■■■□□ 2.05
PCED1B-203ENST00000548348 ARAP1Q96P48 1450 aa27.83■■■□□ 2.04
PCED1B-203ENST00000548348 SNAPC4Q5SXM2 1469 aa27.82■■■□□ 2.04
PCED1B-203ENST00000548348 MAGI1Q96QZ7 1491 aaPredicted RBP27.81■■■□□ 2.04
PCED1B-203ENST00000548348 GRIN2BQ13224 1484 aa27.78■■■□□ 2.04
PCED1B-203ENST00000548348 CHMP7Q8WUX9 453 aaPredicted RBP27.76■■■□□ 2.03
PCED1B-203ENST00000548348 CLASP1Q7Z460 1538 aa27.73■■■□□ 2.03
PCED1B-203ENST00000548348 SYNJ2O15056 1496 aa27.7■■■□□ 2.03
PCED1B-203ENST00000548348 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
PCED1B-203ENST00000548348 GAPVD1Q14C86 1478 aa27.65■■■□□ 2.02
PCED1B-203ENST00000548348 ABCA10Q8WWZ4 1543 aa27.64■■■□□ 2.02
PCED1B-203ENST00000548348 TRHP20396 242 aaPredicted RBP27.59■■■□□ 2.01
PCED1B-203ENST00000548348 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
PCED1B-203ENST00000548348 ABCA5Q8WWZ7 1642 aa27.54■■■□□ 2
PCED1B-203ENST00000548348 PBRM1Q86U86 1689 aa27.52■■■□□ 2
PCED1B-203ENST00000548348 WRNQ14191 1432 aaPredicted RBP eCLIP27.51■■□□□ 1.99
PCED1B-203ENST00000548348 GRIN2AQ12879 1464 aa27.41■■□□□ 1.98
PCED1B-203ENST00000548348 TOP2BQ02880 1626 aa27.4■■□□□ 1.98
PCED1B-203ENST00000548348 NUP160Q12769 1436 aa27.37■■□□□ 1.97
PCED1B-203ENST00000548348 BIVM-ERCC5R4GMW8 1640 aa27.37■■□□□ 1.97
PCED1B-203ENST00000548348 ADAMTS12P58397 1594 aa27.34■■□□□ 1.97
PCED1B-203ENST00000548348 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
PCED1B-203ENST00000548348 ERICH3Q5RHP9 1530 aa27.29■■□□□ 1.96
PCED1B-203ENST00000548348 CEP170Q5SW79 1584 aa27.26■■□□□ 1.96
PCED1B-203ENST00000548348 ERCC6L2Q5T890 1561 aa27.21■■□□□ 1.95
PCED1B-203ENST00000548348 SHROOM2Q13796 1616 aa27.19■■□□□ 1.94
PCED1B-203ENST00000548348 JPH4Q96JJ6 628 aa27.07■■□□□ 1.92
PCED1B-203ENST00000548348 PRG4Q92954 1404 aaPredicted RBP27.06■■□□□ 1.92
PCED1B-203ENST00000548348 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.9
PCED1B-203ENST00000548348 IGF1RP08069 1367 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms