RNA–Protein interactions for RNA: ENST00000548320.5

RACGAP1-212, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-212ENST00000548320 NISCHQ9Y2I1 1504 aa43.25■■■■■ 4.51
RACGAP1-212ENST00000548320 CCDC180Q9P1Z9 1646 aa38.69■■■■□ 3.78
RACGAP1-212ENST00000548320 ABCC9O60706 1549 aa38.49■■■■□ 3.75
RACGAP1-212ENST00000548320 RB1CC1Q8TDY2 1594 aa36.72■■■■□ 3.47
RACGAP1-212ENST00000548320 NACADO15069 1562 aa36.53■■■■□ 3.44
RACGAP1-212ENST00000548320 DCAF8L2P0C7V8 631 aa36.4■■■■□ 3.42
RACGAP1-212ENST00000548320 MYO15BQ96JP2 1530 aa36.1■■■■□ 3.37
RACGAP1-212ENST00000548320 DNAJC5BQ9UF47 199 aa35.98■■■■□ 3.35
RACGAP1-212ENST00000548320 UNC13AQ9UPW8 1703 aa35.95■■■■□ 3.35
RACGAP1-212ENST00000548320 PABPN1Q86U42 306 aaKnown RBP eCLIP35.9■■■■□ 3.34
RACGAP1-212ENST00000548320 ZCCHC6Q5VYS8 1495 aaKnown RBP35.88■■■■□ 3.33
RACGAP1-212ENST00000548320 DCAF1Q9Y4B6 1507 aa35.73■■■■□ 3.31
RACGAP1-212ENST00000548320 BICRAQ9NZM4 1560 aa35.7■■■■□ 3.31
RACGAP1-212ENST00000548320 SCRIBQ14160 1630 aa35.28■■■■□ 3.24
RACGAP1-212ENST00000548320 SHROOM4Q9ULL8 1493 aa35.16■■■■□ 3.22
RACGAP1-212ENST00000548320 CC2D2AQ9P2K1 1620 aa34.79■■■■□ 3.16
RACGAP1-212ENST00000548320 EIF4G1Q04637 1599 aaKnown RBP34.76■■■■□ 3.16
RACGAP1-212ENST00000548320 CECR2Q9BXF3 1484 aa34.64■■■■□ 3.14
RACGAP1-212ENST00000548320 NCAPD3P42695 1498 aa33.74■■■□□ 2.99
RACGAP1-212ENST00000548320 SMARCA4P51532 1647 aa33.69■■■□□ 2.98
RACGAP1-212ENST00000548320 ATAD2BQ9ULI0 1458 aa33.67■■■□□ 2.98
RACGAP1-212ENST00000548320 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
RACGAP1-212ENST00000548320 BAZ1AQ9NRL2 1556 aaPredicted RBP33.54■■■□□ 2.96
RACGAP1-212ENST00000548320 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
RACGAP1-212ENST00000548320 PEG3Q9GZU2 1588 aa33.36■■■□□ 2.93
RACGAP1-212ENST00000548320 MROH2BQ7Z745 1585 aa33.35■■■□□ 2.93
RACGAP1-212ENST00000548320 BAZ1BQ9UIG0 1483 aaKnown RBP33.32■■■□□ 2.92
RACGAP1-212ENST00000548320 ERCC6Q03468 1493 aa33.18■■■□□ 2.9
RACGAP1-212ENST00000548320 NESP48681 1621 aa33.16■■■□□ 2.9
RACGAP1-212ENST00000548320 CUX2O14529 1486 aa33.05■■■□□ 2.88
RACGAP1-212ENST00000548320 WIZO95785 1651 aa32.97■■■□□ 2.87
RACGAP1-212ENST00000548320 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
RACGAP1-212ENST00000548320 DNAJC5Q9H3Z4 198 aa32.82■■■□□ 2.84
RACGAP1-212ENST00000548320 THOC2Q8NI27 1593 aaKnown RBP32.75■■■□□ 2.83
RACGAP1-212ENST00000548320 RSF1Q96T23 1441 aaPredicted RBP32.74■■■□□ 2.83
RACGAP1-212ENST00000548320 KIF21AQ7Z4S6 1674 aa32.72■■■□□ 2.83
RACGAP1-212ENST00000548320 CADPSQ9ULU8 1353 aa32.71■■■□□ 2.83
RACGAP1-212ENST00000548320 PDS5BQ9NTI5 1447 aa32.71■■■□□ 2.83
RACGAP1-212ENST00000548320 TOP2AP11388 1531 aaKnown RBP32.52■■■□□ 2.8
RACGAP1-212ENST00000548320 MRC2Q9UBG0 1479 aa32.42■■■□□ 2.78
RACGAP1-212ENST00000548320 CFTRP13569 1480 aa32.4■■■□□ 2.78
RACGAP1-212ENST00000548320 WDR62O43379 1518 aa32.35■■■□□ 2.77
RACGAP1-212ENST00000548320 FANCD2Q9BXW9 1451 aa32.34■■■□□ 2.77
RACGAP1-212ENST00000548320 CEP164Q9UPV0 1460 aa32.34■■■□□ 2.77
RACGAP1-212ENST00000548320 CCDC88BA6NC98 1476 aa32.19■■■□□ 2.74
RACGAP1-212ENST00000548320 URB2Q14146 1524 aaKnown RBP32.09■■■□□ 2.73
RACGAP1-212ENST00000548320 PRDM2Q13029 1718 aa32.09■■■□□ 2.73
RACGAP1-212ENST00000548320 TOPBP1Q92547 1522 aa31.76■■■□□ 2.68
RACGAP1-212ENST00000548320 IFT140Q96RY7 1462 aa31.68■■■□□ 2.66
RACGAP1-212ENST00000548320 ABCC8Q09428 1581 aa31.68■■■□□ 2.66
RACGAP1-212ENST00000548320 ZNF608Q9ULD9 1512 aaPredicted RBP31.65■■■□□ 2.66
RACGAP1-212ENST00000548320 DNMBPQ6XZF7 1577 aa31.65■■■□□ 2.66
RACGAP1-212ENST00000548320 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
RACGAP1-212ENST00000548320 TARBP1Q13395 1621 aaKnown RBP31.49■■■□□ 2.63
RACGAP1-212ENST00000548320 EIF4G3O43432 1585 aaKnown RBP31.47■■■□□ 2.63
RACGAP1-212ENST00000548320 SUPT5HO00267 1087 aaKnown RBP31.45■■■□□ 2.63
RACGAP1-212ENST00000548320 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
RACGAP1-212ENST00000548320 POLA1P09884 1462 aaPredicted RBP31.45■■■□□ 2.62
RACGAP1-212ENST00000548320 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.621e-6■■■□□ 15.3
RACGAP1-212ENST00000548320 RAD54L2Q9Y4B4 1467 aa31.35■■■□□ 2.61
RACGAP1-212ENST00000548320 SOGA1O94964 1423 aa31.32■■■□□ 2.6
RACGAP1-212ENST00000548320 CUX1P39880 1505 aa31.31■■■□□ 2.6
RACGAP1-212ENST00000548320 FGD5Q6ZNL6 1462 aa31.28■■■□□ 2.6
RACGAP1-212ENST00000548320 TDRD9Q8NDG6 1382 aaKnown RBP31.23■■■□□ 2.59
RACGAP1-212ENST00000548320 CHD1O14646 1710 aa31.21■■■□□ 2.59
RACGAP1-212ENST00000548320 RIMBP3CA6NJZ7 1639 aa31.18■■■□□ 2.58
RACGAP1-212ENST00000548320 RIMBP3BA6NNM3 1639 aa31.18■■■□□ 2.58
RACGAP1-212ENST00000548320 RIMBP3Q9UFD9 1639 aa31.18■■■□□ 2.58
RACGAP1-212ENST00000548320 WDR97A6NE52 1622 aa31.13■■■□□ 2.57
RACGAP1-212ENST00000548320 FBLN2P98095 1184 aa31.12■■■□□ 2.57
RACGAP1-212ENST00000548320 ARHGEF11O15085 1522 aa31.09■■■□□ 2.57
RACGAP1-212ENST00000548320 SNAPC4Q5SXM2 1469 aa31.06■■■□□ 2.56
RACGAP1-212ENST00000548320 GRIN2BQ13224 1484 aa31■■■□□ 2.55
RACGAP1-212ENST00000548320 MAGI1Q96QZ7 1491 aaPredicted RBP30.97■■■□□ 2.55
RACGAP1-212ENST00000548320 ABCA10Q8WWZ4 1543 aa30.93■■■□□ 2.54
RACGAP1-212ENST00000548320 GAPVD1Q14C86 1478 aa30.93■■■□□ 2.54
RACGAP1-212ENST00000548320 CHMP7Q8WUX9 453 aaPredicted RBP30.92■■■□□ 2.54
RACGAP1-212ENST00000548320 PBRM1Q86U86 1689 aa30.9■■■□□ 2.54
RACGAP1-212ENST00000548320 ABCA5Q8WWZ7 1642 aa30.88■■■□□ 2.53
RACGAP1-212ENST00000548320 SYNJ2O15056 1496 aa30.87■■■□□ 2.53
RACGAP1-212ENST00000548320 BIVM-ERCC5R4GMW8 1640 aa30.87■■■□□ 2.53
RACGAP1-212ENST00000548320 CYB5RLQ6IPT4 315 aa30.86■■■□□ 2.53
RACGAP1-212ENST00000548320 TOP2BQ02880 1626 aa30.86■■■□□ 2.53
RACGAP1-212ENST00000548320 CLASP1Q7Z460 1538 aa30.85■■■□□ 2.53
RACGAP1-212ENST00000548320 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
RACGAP1-212ENST00000548320 SYNJ1O43426 1573 aa30.84■■■□□ 2.53
RACGAP1-212ENST00000548320 ARAP1Q96P48 1450 aa30.81■■■□□ 2.52
RACGAP1-212ENST00000548320 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
RACGAP1-212ENST00000548320 GRIN2AQ12879 1464 aa30.61■■■□□ 2.49
RACGAP1-212ENST00000548320 ERICH3Q5RHP9 1530 aa30.55■■■□□ 2.48
RACGAP1-212ENST00000548320 FHAD1B1AJZ9 1412 aa30.54■■■□□ 2.48
RACGAP1-212ENST00000548320 CEP170Q5SW79 1584 aa30.51■■■□□ 2.47
RACGAP1-212ENST00000548320 NUP160Q12769 1436 aa30.5■■■□□ 2.47
RACGAP1-212ENST00000548320 TRHP20396 242 aaPredicted RBP30.42■■■□□ 2.46
RACGAP1-212ENST00000548320 ERCC6L2Q5T890 1561 aa30.41■■■□□ 2.46
RACGAP1-212ENST00000548320 SHROOM2Q13796 1616 aa30.36■■■□□ 2.45
RACGAP1-212ENST00000548320 IGF1RP08069 1367 aa30.25■■■□□ 2.43
RACGAP1-212ENST00000548320 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
RACGAP1-212ENST00000548320 JPH4Q96JJ6 628 aa30.21■■■□□ 2.43
RACGAP1-212ENST00000548320 RUSC2Q8N2Y8 1516 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms