RNA–Protein interactions for RNA: ENST00000548317.1

RARG-209, Transcript of retinoic acid receptor gamma, humanhuman

TSL 2

Gene RARG, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARG-209ENST00000548317 NISCHQ9Y2I1 1504 aa19.07■□□□□ 0.64
RARG-209ENST00000548317 ABCC9O60706 1549 aa18.04■□□□□ 0.48
RARG-209ENST00000548317 CCDC180Q9P1Z9 1646 aa17.51■□□□□ 0.39
RARG-209ENST00000548317 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
RARG-209ENST00000548317 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
RARG-209ENST00000548317 UNC13AQ9UPW8 1703 aa16.72■□□□□ 0.27
RARG-209ENST00000548317 NACADO15069 1562 aa16.64■□□□□ 0.25
RARG-209ENST00000548317 PABPN1Q86U42 306 aaKnown RBP eCLIP16.61■□□□□ 0.25
RARG-209ENST00000548317 DNAJC5Q9H3Z4 198 aa16.51■□□□□ 0.23
RARG-209ENST00000548317 BICRAQ9NZM4 1560 aa16.5■□□□□ 0.23
RARG-209ENST00000548317 CC2D2AQ9P2K1 1620 aa16.33■□□□□ 0.2
RARG-209ENST00000548317 CECR2Q9BXF3 1484 aa16.32■□□□□ 0.2
RARG-209ENST00000548317 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
RARG-209ENST00000548317 MYO15BQ96JP2 1530 aa16.18■□□□□ 0.18
RARG-209ENST00000548317 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
RARG-209ENST00000548317 EIF4G1Q04637 1599 aaKnown RBP16.12■□□□□ 0.17
RARG-209ENST00000548317 SCRIBQ14160 1630 aa15.87■□□□□ 0.13
RARG-209ENST00000548317 CUX2O14529 1486 aa15.84■□□□□ 0.13
RARG-209ENST00000548317 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
RARG-209ENST00000548317 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
RARG-209ENST00000548317 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
RARG-209ENST00000548317 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
RARG-209ENST00000548317 THOC2Q8NI27 1593 aaKnown RBP15.4■□□□□ 0.06
RARG-209ENST00000548317 NESP48681 1621 aa15.33■□□□□ 0.04
RARG-209ENST00000548317 NCAPD3P42695 1498 aa15.32■□□□□ 0.04
RARG-209ENST00000548317 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
RARG-209ENST00000548317 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
RARG-209ENST00000548317 SMARCA2P51531 1590 aa15.2■□□□□ 0.02
RARG-209ENST00000548317 ATAD2BQ9ULI0 1458 aa15.19■□□□□ 0.02
RARG-209ENST00000548317 LAMC3Q9Y6N6 1575 aa15.15■□□□□ 0.02
RARG-209ENST00000548317 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
RARG-209ENST00000548317 SMARCA4P51532 1647 aa15.08■□□□□ 0
RARG-209ENST00000548317 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
RARG-209ENST00000548317 WDR62O43379 1518 aa14.99□□□□□ -0.01
RARG-209ENST00000548317 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
RARG-209ENST00000548317 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
RARG-209ENST00000548317 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
RARG-209ENST00000548317 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
RARG-209ENST00000548317 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
RARG-209ENST00000548317 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
RARG-209ENST00000548317 OSCARQ8IYS5 282 aa14.89□□□□□ -0.03
RARG-209ENST00000548317 ARHGEF11O15085 1522 aa14.79□□□□□ -0.04
RARG-209ENST00000548317 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
RARG-209ENST00000548317 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
RARG-209ENST00000548317 MROH2BQ7Z745 1585 aa14.69□□□□□ -0.06
RARG-209ENST00000548317 AEBP2Q6ZN18 517 aaPredicted RBP14.69□□□□□ -0.06
RARG-209ENST00000548317 FANCD2Q9BXW9 1451 aa14.67□□□□□ -0.06
RARG-209ENST00000548317 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
RARG-209ENST00000548317 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
RARG-209ENST00000548317 ARAP1Q96P48 1450 aa14.6□□□□□ -0.07
RARG-209ENST00000548317 CYB5RLQ6IPT4 315 aa14.59□□□□□ -0.07
RARG-209ENST00000548317 CHD1O14646 1710 aa14.57□□□□□ -0.08
RARG-209ENST00000548317 WIZO95785 1651 aa14.53□□□□□ -0.08
RARG-209ENST00000548317 ZNF608Q9ULD9 1512 aaPredicted RBP14.53□□□□□ -0.08
RARG-209ENST00000548317 PRDM2Q13029 1718 aa14.52□□□□□ -0.08
RARG-209ENST00000548317 CFTRP13569 1480 aa14.52□□□□□ -0.08
RARG-209ENST00000548317 EIF4G3O43432 1585 aaKnown RBP14.49□□□□□ -0.09
RARG-209ENST00000548317 IFT140Q96RY7 1462 aa14.46□□□□□ -0.09
RARG-209ENST00000548317 RSF1Q96T23 1441 aaPredicted RBP14.44□□□□□ -0.1
RARG-209ENST00000548317 TOPBP1Q92547 1522 aa14.33□□□□□ -0.12
RARG-209ENST00000548317 TARBP1Q13395 1621 aaKnown RBP14.32□□□□□ -0.12
RARG-209ENST00000548317 CLASP1Q7Z460 1538 aa14.31□□□□□ -0.12
RARG-209ENST00000548317 TOP2AP11388 1531 aaKnown RBP14.27□□□□□ -0.12
RARG-209ENST00000548317 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.12
RARG-209ENST00000548317 SUPT5HO00267 1087 aaKnown RBP14.26□□□□□ -0.13
RARG-209ENST00000548317 DNMBPQ6XZF7 1577 aa14.25□□□□□ -0.13
RARG-209ENST00000548317 FBLN2P98095 1184 aa14.23□□□□□ -0.13
RARG-209ENST00000548317 ILDR1Q86SU0 546 aaPredicted RBP14.22□□□□□ -0.13
RARG-209ENST00000548317 SYNJ1O43426 1573 aa14.21□□□□□ -0.14
RARG-209ENST00000548317 ABCC8Q09428 1581 aa14.21□□□□□ -0.14
RARG-209ENST00000548317 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
RARG-209ENST00000548317 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
RARG-209ENST00000548317 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
RARG-209ENST00000548317 GAPVD1Q14C86 1478 aa14.14□□□□□ -0.15
RARG-209ENST00000548317 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
RARG-209ENST00000548317 CCDC88BA6NC98 1476 aa14.11□□□□□ -0.15
RARG-209ENST00000548317 MAGI1Q96QZ7 1491 aaPredicted RBP14.08□□□□□ -0.16
RARG-209ENST00000548317 RAD54L2Q9Y4B4 1467 aa14.07□□□□□ -0.16
RARG-209ENST00000548317 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
RARG-209ENST00000548317 SYNJ2O15056 1496 aa14.04□□□□□ -0.16
RARG-209ENST00000548317 ERCC6L2Q5T890 1561 aa14.04□□□□□ -0.16
RARG-209ENST00000548317 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
RARG-209ENST00000548317 CHMP7Q8WUX9 453 aaPredicted RBP14.02□□□□□ -0.17
RARG-209ENST00000548317 SOGA1O94964 1423 aa13.99□□□□□ -0.17
RARG-209ENST00000548317 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
RARG-209ENST00000548317 KDM4FA0A1W2PPD8 638 aa13.97□□□□□ -0.17
RARG-209ENST00000548317 FGD5Q6ZNL6 1462 aa13.95□□□□□ -0.18
RARG-209ENST00000548317 CEP170Q5SW79 1584 aa13.93□□□□□ -0.18
RARG-209ENST00000548317 SHROOM2Q13796 1616 aa13.91□□□□□ -0.18
RARG-209ENST00000548317 KDM6BO15054 1643 aa13.9□□□□□ -0.18
RARG-209ENST00000548317 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
RARG-209ENST00000548317 DIP2BQ9P265 1576 aa13.87□□□□□ -0.19
RARG-209ENST00000548317 TSPOAP1O95153 1857 aa13.87□□□□□ -0.19
RARG-209ENST00000548317 CUX1P39880 1505 aa13.86□□□□□ -0.19
RARG-209ENST00000548317 ABCC10Q5T3U5 1492 aa13.85□□□□□ -0.19
RARG-209ENST00000548317 GRIN2AQ12879 1464 aa13.84□□□□□ -0.19
RARG-209ENST00000548317 HECW2Q9P2P5 1572 aa13.83□□□□□ -0.19
RARG-209ENST00000548317 NUP160Q12769 1436 aa13.81□□□□□ -0.2
RARG-209ENST00000548317 MAPKBP1O60336 1514 aa13.81□□□□□ -0.2
RARG-209ENST00000548317 ADAMTS12P58397 1594 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms