RNA–Protein interactions for RNA: ENST00000548312.5

HVCN1-207, Transcript of hydrogen voltage gated channel 1, humanhuman

TSL 2 BASIC

Gene HVCN1, Length 1,301 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-207ENST00000548312 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
HVCN1-207ENST00000548312 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
HVCN1-207ENST00000548312 ABCC9O60706 1549 aa22.54■■□□□ 1.2
HVCN1-207ENST00000548312 RB1CC1Q8TDY2 1594 aa21.47■■□□□ 1.03
HVCN1-207ENST00000548312 NACADO15069 1562 aa21.28■■□□□ 1
HVCN1-207ENST00000548312 DNAJC5BQ9UF47 199 aa21.16■□□□□ 0.98
HVCN1-207ENST00000548312 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
HVCN1-207ENST00000548312 DCAF8L2P0C7V8 631 aa21.03■□□□□ 0.96
HVCN1-207ENST00000548312 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
HVCN1-207ENST00000548312 PABPN1Q86U42 306 aaKnown RBP eCLIP20.91■□□□□ 0.94
HVCN1-207ENST00000548312 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
HVCN1-207ENST00000548312 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
HVCN1-207ENST00000548312 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.89
HVCN1-207ENST00000548312 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
HVCN1-207ENST00000548312 SCRIBQ14160 1630 aa20.48■□□□□ 0.87
HVCN1-207ENST00000548312 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
HVCN1-207ENST00000548312 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.85
HVCN1-207ENST00000548312 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.84
HVCN1-207ENST00000548312 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
HVCN1-207ENST00000548312 DNAJC5Q9H3Z4 198 aa19.54■□□□□ 0.72
HVCN1-207ENST00000548312 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
HVCN1-207ENST00000548312 ATAD2BQ9ULI0 1458 aa19.53■□□□□ 0.72
HVCN1-207ENST00000548312 CUX2O14529 1486 aa19.51■□□□□ 0.71
HVCN1-207ENST00000548312 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
HVCN1-207ENST00000548312 HMGXB3Q12766 1538 aa19.5■□□□□ 0.71
HVCN1-207ENST00000548312 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
HVCN1-207ENST00000548312 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
HVCN1-207ENST00000548312 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
HVCN1-207ENST00000548312 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
HVCN1-207ENST00000548312 NESP48681 1621 aa19.33■□□□□ 0.68
HVCN1-207ENST00000548312 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
HVCN1-207ENST00000548312 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
HVCN1-207ENST00000548312 MROH2BQ7Z745 1585 aa19.22■□□□□ 0.67
HVCN1-207ENST00000548312 KIF21AQ7Z4S6 1674 aa19.18■□□□□ 0.66
HVCN1-207ENST00000548312 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.64
HVCN1-207ENST00000548312 WIZO95785 1651 aa19.02■□□□□ 0.64
HVCN1-207ENST00000548312 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
HVCN1-207ENST00000548312 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
HVCN1-207ENST00000548312 WDR62O43379 1518 aa18.92■□□□□ 0.62
HVCN1-207ENST00000548312 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
HVCN1-207ENST00000548312 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
HVCN1-207ENST00000548312 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
HVCN1-207ENST00000548312 CFTRP13569 1480 aa18.77■□□□□ 0.59
HVCN1-207ENST00000548312 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
HVCN1-207ENST00000548312 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
HVCN1-207ENST00000548312 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
HVCN1-207ENST00000548312 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
HVCN1-207ENST00000548312 OSCARQ8IYS5 282 aa18.52■□□□□ 0.56
HVCN1-207ENST00000548312 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.55
HVCN1-207ENST00000548312 IFT140Q96RY7 1462 aa18.47■□□□□ 0.55
HVCN1-207ENST00000548312 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
HVCN1-207ENST00000548312 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
HVCN1-207ENST00000548312 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
HVCN1-207ENST00000548312 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
HVCN1-207ENST00000548312 RIMBP3CA6NJZ7 1639 aa18.39■□□□□ 0.53
HVCN1-207ENST00000548312 RIMBP3BA6NNM3 1639 aa18.39■□□□□ 0.53
HVCN1-207ENST00000548312 RIMBP3Q9UFD9 1639 aa18.39■□□□□ 0.53
HVCN1-207ENST00000548312 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
HVCN1-207ENST00000548312 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
HVCN1-207ENST00000548312 CHD1O14646 1710 aa18.31■□□□□ 0.52
HVCN1-207ENST00000548312 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
HVCN1-207ENST00000548312 POLA1P09884 1462 aaPredicted RBP18.24■□□□□ 0.51
HVCN1-207ENST00000548312 AQRO60306 1485 aaKnown RBP eCLIP18.22■□□□□ 0.51
HVCN1-207ENST00000548312 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
HVCN1-207ENST00000548312 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.49
HVCN1-207ENST00000548312 FGD5Q6ZNL6 1462 aa18.12■□□□□ 0.49
HVCN1-207ENST00000548312 SOGA1O94964 1423 aa18.11■□□□□ 0.49
HVCN1-207ENST00000548312 FBLN2P98095 1184 aa18.11■□□□□ 0.49
HVCN1-207ENST00000548312 ARAP1Q96P48 1450 aa18.09■□□□□ 0.49
HVCN1-207ENST00000548312 CYB5RLQ6IPT4 315 aa18.09■□□□□ 0.49
HVCN1-207ENST00000548312 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
HVCN1-207ENST00000548312 CUX1P39880 1505 aa18.08■□□□□ 0.48
HVCN1-207ENST00000548312 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
HVCN1-207ENST00000548312 MAGI1Q96QZ7 1491 aaPredicted RBP18.04■□□□□ 0.48
HVCN1-207ENST00000548312 CLASP1Q7Z460 1538 aa18.04■□□□□ 0.48
HVCN1-207ENST00000548312 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
HVCN1-207ENST00000548312 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
HVCN1-207ENST00000548312 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
HVCN1-207ENST00000548312 SYNJ2O15056 1496 aa17.97■□□□□ 0.47
HVCN1-207ENST00000548312 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
HVCN1-207ENST00000548312 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
HVCN1-207ENST00000548312 ABCA5Q8WWZ7 1642 aa17.93■□□□□ 0.46
HVCN1-207ENST00000548312 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
HVCN1-207ENST00000548312 ABCA10Q8WWZ4 1543 aa17.9■□□□□ 0.46
HVCN1-207ENST00000548312 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
HVCN1-207ENST00000548312 ADAMTS12P58397 1594 aa17.81■□□□□ 0.44
HVCN1-207ENST00000548312 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
HVCN1-207ENST00000548312 GRIN2AQ12879 1464 aa17.79■□□□□ 0.44
HVCN1-207ENST00000548312 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
HVCN1-207ENST00000548312 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
HVCN1-207ENST00000548312 CEP170Q5SW79 1584 aa17.75■□□□□ 0.43
HVCN1-207ENST00000548312 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
HVCN1-207ENST00000548312 NUP160Q12769 1436 aa17.72■□□□□ 0.43
HVCN1-207ENST00000548312 SHROOM2Q13796 1616 aa17.71■□□□□ 0.43
HVCN1-207ENST00000548312 ERICH3Q5RHP9 1530 aa17.7■□□□□ 0.42
HVCN1-207ENST00000548312 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
HVCN1-207ENST00000548312 KIF13AQ9H1H9 1805 aa17.58■□□□□ 0.4
HVCN1-207ENST00000548312 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
HVCN1-207ENST00000548312 PRG4Q92954 1404 aaPredicted RBP17.54■□□□□ 0.4
HVCN1-207ENST00000548312 AEBP2Q6ZN18 517 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms