RNA–Protein interactions for RNA: ENST00000548310.1

AMDHD1-202, Transcript of amidohydrolase domain containing 1, humanhuman

TSL 1 (best)

Gene AMDHD1, Length 1,841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMDHD1-202ENST00000548310 NISCHQ9Y2I1 1504 aa29.97■■■□□ 2.39
AMDHD1-202ENST00000548310 CCDC180Q9P1Z9 1646 aa26.6■■□□□ 1.85
AMDHD1-202ENST00000548310 ABCC9O60706 1549 aa26.1■■□□□ 1.77
AMDHD1-202ENST00000548310 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
AMDHD1-202ENST00000548310 RB1CC1Q8TDY2 1594 aa25.04■■□□□ 1.6
AMDHD1-202ENST00000548310 NACADO15069 1562 aa25.01■■□□□ 1.59
AMDHD1-202ENST00000548310 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
AMDHD1-202ENST00000548310 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.57
AMDHD1-202ENST00000548310 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
AMDHD1-202ENST00000548310 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.53
AMDHD1-202ENST00000548310 PABPN1Q86U42 306 aaKnown RBP eCLIP24.42■■□□□ 1.5
AMDHD1-202ENST00000548310 BICRAQ9NZM4 1560 aa24.35■■□□□ 1.49
AMDHD1-202ENST00000548310 SCRIBQ14160 1630 aa24.33■■□□□ 1.49
AMDHD1-202ENST00000548310 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
AMDHD1-202ENST00000548310 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.42
AMDHD1-202ENST00000548310 EIF4G1Q04637 1599 aaKnown RBP23.67■■□□□ 1.38
AMDHD1-202ENST00000548310 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
AMDHD1-202ENST00000548310 CECR2Q9BXF3 1484 aa23.41■■□□□ 1.34
AMDHD1-202ENST00000548310 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
AMDHD1-202ENST00000548310 BAZ1AQ9NRL2 1556 aaPredicted RBP23.2■■□□□ 1.3
AMDHD1-202ENST00000548310 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.29
AMDHD1-202ENST00000548310 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
AMDHD1-202ENST00000548310 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
AMDHD1-202ENST00000548310 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
AMDHD1-202ENST00000548310 PEG3Q9GZU2 1588 aa23■■□□□ 1.27
AMDHD1-202ENST00000548310 HMGXB3Q12766 1538 aa22.96■■□□□ 1.27
AMDHD1-202ENST00000548310 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
AMDHD1-202ENST00000548310 WIZO95785 1651 aa22.9■■□□□ 1.26
AMDHD1-202ENST00000548310 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
AMDHD1-202ENST00000548310 NESP48681 1621 aa22.61■■□□□ 1.21
AMDHD1-202ENST00000548310 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
AMDHD1-202ENST00000548310 LAMC3Q9Y6N6 1575 aa22.47■■□□□ 1.19
AMDHD1-202ENST00000548310 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
AMDHD1-202ENST00000548310 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
AMDHD1-202ENST00000548310 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
AMDHD1-202ENST00000548310 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
AMDHD1-202ENST00000548310 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.17
AMDHD1-202ENST00000548310 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
AMDHD1-202ENST00000548310 CFTRP13569 1480 aa22.3■■□□□ 1.16
AMDHD1-202ENST00000548310 THOC2Q8NI27 1593 aaKnown RBP22.22■■□□□ 1.15
AMDHD1-202ENST00000548310 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
AMDHD1-202ENST00000548310 CUX2O14529 1486 aa22.17■■□□□ 1.14
AMDHD1-202ENST00000548310 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
AMDHD1-202ENST00000548310 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
AMDHD1-202ENST00000548310 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
AMDHD1-202ENST00000548310 WDR62O43379 1518 aa22.03■■□□□ 1.12
AMDHD1-202ENST00000548310 URB2Q14146 1524 aaKnown RBP21.98■■□□□ 1.11
AMDHD1-202ENST00000548310 TOPBP1Q92547 1522 aa21.83■■□□□ 1.09
AMDHD1-202ENST00000548310 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
AMDHD1-202ENST00000548310 ABCC8Q09428 1581 aa21.77■■□□□ 1.08
AMDHD1-202ENST00000548310 CUX1P39880 1505 aa21.69■■□□□ 1.06
AMDHD1-202ENST00000548310 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
AMDHD1-202ENST00000548310 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
AMDHD1-202ENST00000548310 ZNF608Q9ULD9 1512 aaPredicted RBP21.63■■□□□ 1.05
AMDHD1-202ENST00000548310 TARBP1Q13395 1621 aaKnown RBP21.61■■□□□ 1.05
AMDHD1-202ENST00000548310 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
AMDHD1-202ENST00000548310 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
AMDHD1-202ENST00000548310 SOGA1O94964 1423 aa21.57■■□□□ 1.04
AMDHD1-202ENST00000548310 DNAJC5Q9H3Z4 198 aa21.55■■□□□ 1.04
AMDHD1-202ENST00000548310 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.04
AMDHD1-202ENST00000548310 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.03
AMDHD1-202ENST00000548310 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
AMDHD1-202ENST00000548310 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
AMDHD1-202ENST00000548310 TOP2BQ02880 1626 aa21.48■■□□□ 1.03
AMDHD1-202ENST00000548310 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
AMDHD1-202ENST00000548310 TDRD9Q8NDG6 1382 aaKnown RBP21.47■■□□□ 1.03
AMDHD1-202ENST00000548310 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
AMDHD1-202ENST00000548310 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
AMDHD1-202ENST00000548310 OSCARQ8IYS5 282 aa21.31■■□□□ 1
AMDHD1-202ENST00000548310 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
AMDHD1-202ENST00000548310 ABCA5Q8WWZ7 1642 aa21.3■■□□□ 1
AMDHD1-202ENST00000548310 GRIN2BQ13224 1484 aa21.28■■□□□ 1
AMDHD1-202ENST00000548310 PBRM1Q86U86 1689 aa21.28■■□□□ 1
AMDHD1-202ENST00000548310 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
AMDHD1-202ENST00000548310 CHD1O14646 1710 aa21.27■■□□□ 1
AMDHD1-202ENST00000548310 FBLN2P98095 1184 aa21.25■□□□□ 0.99
AMDHD1-202ENST00000548310 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
AMDHD1-202ENST00000548310 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
AMDHD1-202ENST00000548310 SYNJ2O15056 1496 aa21.14■□□□□ 0.98
AMDHD1-202ENST00000548310 ERICH3Q5RHP9 1530 aa21.1■□□□□ 0.97
AMDHD1-202ENST00000548310 ADAMTS12P58397 1594 aa21.08■□□□□ 0.97
AMDHD1-202ENST00000548310 KIF27Q86VH2 1401 aa21.06■□□□□ 0.96
AMDHD1-202ENST00000548310 TRIM41Q8WV44 630 aa21.05■□□□□ 0.96
AMDHD1-202ENST00000548310 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
AMDHD1-202ENST00000548310 GRIN2AQ12879 1464 aa21.02■□□□□ 0.96
AMDHD1-202ENST00000548310 IGF1RP08069 1367 aa21.02■□□□□ 0.95
AMDHD1-202ENST00000548310 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
AMDHD1-202ENST00000548310 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
AMDHD1-202ENST00000548310 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
AMDHD1-202ENST00000548310 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
AMDHD1-202ENST00000548310 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
AMDHD1-202ENST00000548310 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
AMDHD1-202ENST00000548310 CEP170Q5SW79 1584 aa20.94■□□□□ 0.94
AMDHD1-202ENST00000548310 NUP160Q12769 1436 aa20.92■□□□□ 0.94
AMDHD1-202ENST00000548310 CUL7Q14999 1698 aa20.91■□□□□ 0.94
AMDHD1-202ENST00000548310 CARMIL1Q5VZK9 1371 aa20.88■□□□□ 0.93
AMDHD1-202ENST00000548310 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
AMDHD1-202ENST00000548310 CYB5RLQ6IPT4 315 aa20.81■□□□□ 0.92
AMDHD1-202ENST00000548310 ARAP1Q96P48 1450 aa20.8■□□□□ 0.92
AMDHD1-202ENST00000548310 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms