RNA–Protein interactions for RNA: ENST00000548284.1

RARG-208, Transcript of retinoic acid receptor gamma, humanhuman

TSL 1 (best)

Gene RARG, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARG-208ENST00000548284 NISCHQ9Y2I1 1504 aa51.55■■■■■ 5.84
RARG-208ENST00000548284 ABCC9O60706 1549 aa46.71■■■■■ 5.07
RARG-208ENST00000548284 CCDC180Q9P1Z9 1646 aa46.34■■■■■ 5.01
RARG-208ENST00000548284 DNAJC5BQ9UF47 199 aa44.46■■■■■ 4.71
RARG-208ENST00000548284 RB1CC1Q8TDY2 1594 aa44.3■■■■■ 4.68
RARG-208ENST00000548284 NACADO15069 1562 aa43.91■■■■■ 4.62
RARG-208ENST00000548284 DCAF8L2P0C7V8 631 aa43.82■■■■■ 4.61
RARG-208ENST00000548284 PABPN1Q86U42 306 aaKnown RBP eCLIP43.45■■■■■ 4.55
RARG-208ENST00000548284 MYO15BQ96JP2 1530 aa43.18■■■■■ 4.5
RARG-208ENST00000548284 UNC13AQ9UPW8 1703 aa43.16■■■■■ 4.5
RARG-208ENST00000548284 BICRAQ9NZM4 1560 aa42.93■■■■■ 4.46
RARG-208ENST00000548284 ZCCHC6Q5VYS8 1495 aaKnown RBP42.66■■■■■ 4.42
RARG-208ENST00000548284 DCAF1Q9Y4B6 1507 aa42.54■■■■■ 4.4
RARG-208ENST00000548284 SHROOM4Q9ULL8 1493 aa42.39■■■■■ 4.38
RARG-208ENST00000548284 SCRIBQ14160 1630 aa42.27■■■■■ 4.36
RARG-208ENST00000548284 CC2D2AQ9P2K1 1620 aa42.17■■■■■ 4.34
RARG-208ENST00000548284 CECR2Q9BXF3 1484 aa42.15■■■■■ 4.34
RARG-208ENST00000548284 EIF4G1Q04637 1599 aaKnown RBP41.95■■■■■ 4.31
RARG-208ENST00000548284 DNAJC5Q9H3Z4 198 aa41.29■■■■■ 4.2
RARG-208ENST00000548284 NCAPD3P42695 1498 aa40.53■■■■■ 4.08
RARG-208ENST00000548284 CUX2O14529 1486 aa40.52■■■■■ 4.08
RARG-208ENST00000548284 ERCC6Q03468 1493 aa40.39■■■■■ 4.06
RARG-208ENST00000548284 ATAD2BQ9ULI0 1458 aa40.38■■■■■ 4.05
RARG-208ENST00000548284 SMARCA2P51531 1590 aa40.28■■■■■ 4.04
RARG-208ENST00000548284 SMARCA4P51532 1647 aa40.26■■■■■ 4.04
RARG-208ENST00000548284 HMGXB3Q12766 1538 aa40.2■■■■■ 4.03
RARG-208ENST00000548284 BAZ1AQ9NRL2 1556 aaPredicted RBP40.07■■■■■ 4.01
RARG-208ENST00000548284 BAZ1BQ9UIG0 1483 aaKnown RBP40.03■■■■■ 4
RARG-208ENST00000548284 NESP48681 1621 aa39.98■■■■□ 3.99
RARG-208ENST00000548284 PEG3Q9GZU2 1588 aa39.83■■■■□ 3.97
RARG-208ENST00000548284 MROH2BQ7Z745 1585 aa39.71■■■■□ 3.95
RARG-208ENST00000548284 THOC2Q8NI27 1593 aaKnown RBP39.67■■■■□ 3.94
RARG-208ENST00000548284 LAMC3Q9Y6N6 1575 aa39.67■■■■□ 3.94
RARG-208ENST00000548284 PDS5BQ9NTI5 1447 aa39.52■■■■□ 3.92
RARG-208ENST00000548284 KIF21AQ7Z4S6 1674 aa39.41■■■■□ 3.9
RARG-208ENST00000548284 CADPSQ9ULU8 1353 aa39.33■■■■□ 3.89
RARG-208ENST00000548284 WIZO95785 1651 aa39.22■■■■□ 3.87
RARG-208ENST00000548284 TRIM41Q8WV44 630 aa39.18■■■■□ 3.86
RARG-208ENST00000548284 MRC2Q9UBG0 1479 aa39.16■■■■□ 3.86
RARG-208ENST00000548284 WDR62O43379 1518 aa39.02■■■■□ 3.84
RARG-208ENST00000548284 CEP164Q9UPV0 1460 aa38.97■■■■□ 3.83
RARG-208ENST00000548284 FANCD2Q9BXW9 1451 aa38.89■■■■□ 3.82
RARG-208ENST00000548284 RSF1Q96T23 1441 aaPredicted RBP38.81■■■■□ 3.8
RARG-208ENST00000548284 CFTRP13569 1480 aa38.79■■■■□ 3.8
RARG-208ENST00000548284 TOP2AP11388 1531 aaKnown RBP38.73■■■■□ 3.79
RARG-208ENST00000548284 OSCARQ8IYS5 282 aa38.59■■■■□ 3.77
RARG-208ENST00000548284 URB2Q14146 1524 aaKnown RBP38.53■■■■□ 3.76
RARG-208ENST00000548284 PRDM2Q13029 1718 aa38.32■■■■□ 3.72
RARG-208ENST00000548284 CCDC88BA6NC98 1476 aa38.3■■■■□ 3.72
RARG-208ENST00000548284 IFT140Q96RY7 1462 aa38.2■■■■□ 3.71
RARG-208ENST00000548284 RIMBP3CA6NJZ7 1639 aa38.14■■■■□ 3.7
RARG-208ENST00000548284 RIMBP3BA6NNM3 1639 aa38.14■■■■□ 3.7
RARG-208ENST00000548284 RIMBP3Q9UFD9 1639 aa38.14■■■■□ 3.7
RARG-208ENST00000548284 ZNF608Q9ULD9 1512 aaPredicted RBP38.12■■■■□ 3.69
RARG-208ENST00000548284 TOPBP1Q92547 1522 aa38.1■■■■□ 3.69
RARG-208ENST00000548284 ABCC8Q09428 1581 aa38.05■■■■□ 3.68
RARG-208ENST00000548284 ARHGEF11O15085 1522 aa37.96■■■■□ 3.67
RARG-208ENST00000548284 DNMBPQ6XZF7 1577 aa37.93■■■■□ 3.66
RARG-208ENST00000548284 EIF4G3O43432 1585 aaKnown RBP37.89■■■■□ 3.66
RARG-208ENST00000548284 AQRO60306 1485 aaKnown RBP eCLIP37.77■■■■□ 3.643e-9■■■■■ 44.8
RARG-208ENST00000548284 CYB5RLQ6IPT4 315 aa37.73■■■■□ 3.63
RARG-208ENST00000548284 TARBP1Q13395 1621 aaKnown RBP37.72■■■■□ 3.63
RARG-208ENST00000548284 FBLN2P98095 1184 aa37.7■■■■□ 3.63
RARG-208ENST00000548284 POLA1P09884 1462 aaPredicted RBP37.7■■■■□ 3.63
RARG-208ENST00000548284 CHD1O14646 1710 aa37.62■■■■□ 3.61
RARG-208ENST00000548284 RAD54L2Q9Y4B4 1467 aa37.58■■■■□ 3.61
RARG-208ENST00000548284 SOGA1O94964 1423 aa37.57■■■■□ 3.6
RARG-208ENST00000548284 ARAP1Q96P48 1450 aa37.54■■■■□ 3.6
RARG-208ENST00000548284 TDRD9Q8NDG6 1382 aaKnown RBP37.53■■■■□ 3.6
RARG-208ENST00000548284 TRHP20396 242 aaPredicted RBP37.51■■■■□ 3.6
RARG-208ENST00000548284 FGD5Q6ZNL6 1462 aa37.44■■■■□ 3.58
RARG-208ENST00000548284 SNAPC4Q5SXM2 1469 aa37.39■■■■□ 3.58
RARG-208ENST00000548284 WDR97A6NE52 1622 aa37.36■■■■□ 3.57
RARG-208ENST00000548284 CHMP7Q8WUX9 453 aaPredicted RBP37.36■■■■□ 3.57
RARG-208ENST00000548284 CUX1P39880 1505 aa37.32■■■■□ 3.57
RARG-208ENST00000548284 MAGI1Q96QZ7 1491 aaPredicted RBP37.27■■■■□ 3.56
RARG-208ENST00000548284 GRIN2BQ13224 1484 aa37.26■■■■□ 3.56
RARG-208ENST00000548284 SYNJ1O43426 1573 aa37.23■■■■□ 3.55
RARG-208ENST00000548284 CLASP1Q7Z460 1538 aa37.19■■■■□ 3.54
RARG-208ENST00000548284 SYNJ2O15056 1496 aa37.16■■■■□ 3.54
RARG-208ENST00000548284 GAPVD1Q14C86 1478 aa37.09■■■■□ 3.53
RARG-208ENST00000548284 SUPT5HO00267 1087 aaKnown RBP37.06■■■■□ 3.52
RARG-208ENST00000548284 PBRM1Q86U86 1689 aa37.02■■■■□ 3.52
RARG-208ENST00000548284 ABCA10Q8WWZ4 1543 aa36.98■■■■□ 3.51
RARG-208ENST00000548284 ABCA5Q8WWZ7 1642 aa36.92■■■■□ 3.5
RARG-208ENST00000548284 AEBP2Q6ZN18 517 aaPredicted RBP36.89■■■■□ 3.5
RARG-208ENST00000548284 WRNQ14191 1432 aaPredicted RBP eCLIP36.85■■■■□ 3.49
RARG-208ENST00000548284 GRIN2AQ12879 1464 aa36.75■■■■□ 3.47
RARG-208ENST00000548284 ADAMTS12P58397 1594 aa36.68■■■■□ 3.46
RARG-208ENST00000548284 TOP2BQ02880 1626 aa36.67■■■■□ 3.46
RARG-208ENST00000548284 BIVM-ERCC5R4GMW8 1640 aa36.64■■■■□ 3.46
RARG-208ENST00000548284 FHAD1B1AJZ9 1412 aa36.62■■■■□ 3.45
RARG-208ENST00000548284 NUP160Q12769 1436 aa36.61■■■■□ 3.45
RARG-208ENST00000548284 CEP170Q5SW79 1584 aa36.6■■■■□ 3.45
RARG-208ENST00000548284 ERCC6L2Q5T890 1561 aa36.59■■■■□ 3.45
RARG-208ENST00000548284 ERICH3Q5RHP9 1530 aa36.52■■■■□ 3.44
RARG-208ENST00000548284 SHROOM2Q13796 1616 aa36.44■■■■□ 3.42
RARG-208ENST00000548284 PRG4Q92954 1404 aaPredicted RBP36.35■■■■□ 3.41
RARG-208ENST00000548284 JPH4Q96JJ6 628 aa36.32■■■■□ 3.4
RARG-208ENST00000548284 KIF13AQ9H1H9 1805 aa36.21■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms