RNA–Protein interactions for RNA: ENST00000548280.1

AL139023.1-201, humanhuman

TSL 4 BASIC

Gene AL139023.1, Length 508 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139023.1-201ENST00000548280 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
AL139023.1-201ENST00000548280 ABCC9O60706 1549 aa21.8■■□□□ 1.08
AL139023.1-201ENST00000548280 CCDC180Q9P1Z9 1646 aa21.65■■□□□ 1.06
AL139023.1-201ENST00000548280 RB1CC1Q8TDY2 1594 aa20.6■□□□□ 0.89
AL139023.1-201ENST00000548280 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
AL139023.1-201ENST00000548280 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
AL139023.1-201ENST00000548280 NACADO15069 1562 aa20.42■□□□□ 0.86
AL139023.1-201ENST00000548280 UNC13AQ9UPW8 1703 aa20.37■□□□□ 0.85
AL139023.1-201ENST00000548280 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
AL139023.1-201ENST00000548280 BICRAQ9NZM4 1560 aa20.13■□□□□ 0.81
AL139023.1-201ENST00000548280 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
AL139023.1-201ENST00000548280 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
AL139023.1-201ENST00000548280 SCRIBQ14160 1630 aa19.85■□□□□ 0.77
AL139023.1-201ENST00000548280 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
AL139023.1-201ENST00000548280 CC2D2AQ9P2K1 1620 aa19.67■□□□□ 0.74
AL139023.1-201ENST00000548280 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.73
AL139023.1-201ENST00000548280 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
AL139023.1-201ENST00000548280 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
AL139023.1-201ENST00000548280 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
AL139023.1-201ENST00000548280 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
AL139023.1-201ENST00000548280 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
AL139023.1-201ENST00000548280 NESP48681 1621 aa18.76■□□□□ 0.59
AL139023.1-201ENST00000548280 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
AL139023.1-201ENST00000548280 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
AL139023.1-201ENST00000548280 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
AL139023.1-201ENST00000548280 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
AL139023.1-201ENST00000548280 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
AL139023.1-201ENST00000548280 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
AL139023.1-201ENST00000548280 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
AL139023.1-201ENST00000548280 CUX2O14529 1486 aa18.64■□□□□ 0.57
AL139023.1-201ENST00000548280 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
AL139023.1-201ENST00000548280 KIF21AQ7Z4S6 1674 aa18.54■□□□□ 0.56
AL139023.1-201ENST00000548280 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.56
AL139023.1-201ENST00000548280 WIZO95785 1651 aa18.49■□□□□ 0.55
AL139023.1-201ENST00000548280 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
AL139023.1-201ENST00000548280 PDS5BQ9NTI5 1447 aa18.3■□□□□ 0.52
AL139023.1-201ENST00000548280 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
AL139023.1-201ENST00000548280 MRC2Q9UBG0 1479 aa18.21■□□□□ 0.51
AL139023.1-201ENST00000548280 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
AL139023.1-201ENST00000548280 WDR62O43379 1518 aa18.18■□□□□ 0.5
AL139023.1-201ENST00000548280 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.49
AL139023.1-201ENST00000548280 FANCD2Q9BXW9 1451 aa18.13■□□□□ 0.49
AL139023.1-201ENST00000548280 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
AL139023.1-201ENST00000548280 CFTRP13569 1480 aa18.08■□□□□ 0.49
AL139023.1-201ENST00000548280 URB2Q14146 1524 aaKnown RBP18.05■□□□□ 0.48
AL139023.1-201ENST00000548280 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
AL139023.1-201ENST00000548280 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
AL139023.1-201ENST00000548280 CCDC88BA6NC98 1476 aa17.96■□□□□ 0.47
AL139023.1-201ENST00000548280 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
AL139023.1-201ENST00000548280 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
AL139023.1-201ENST00000548280 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
AL139023.1-201ENST00000548280 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
AL139023.1-201ENST00000548280 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
AL139023.1-201ENST00000548280 RIMBP3CA6NJZ7 1639 aa17.72■□□□□ 0.43
AL139023.1-201ENST00000548280 RIMBP3BA6NNM3 1639 aa17.72■□□□□ 0.43
AL139023.1-201ENST00000548280 RIMBP3Q9UFD9 1639 aa17.72■□□□□ 0.43
AL139023.1-201ENST00000548280 DNMBPQ6XZF7 1577 aa17.71■□□□□ 0.43
AL139023.1-201ENST00000548280 CHD1O14646 1710 aa17.69■□□□□ 0.42
AL139023.1-201ENST00000548280 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
AL139023.1-201ENST00000548280 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
AL139023.1-201ENST00000548280 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
AL139023.1-201ENST00000548280 POLA1P09884 1462 aaPredicted RBP17.62■□□□□ 0.41
AL139023.1-201ENST00000548280 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
AL139023.1-201ENST00000548280 ARHGEF11O15085 1522 aa17.6■□□□□ 0.41
AL139023.1-201ENST00000548280 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
AL139023.1-201ENST00000548280 FBLN2P98095 1184 aa17.53■□□□□ 0.4
AL139023.1-201ENST00000548280 CUX1P39880 1505 aa17.52■□□□□ 0.4
AL139023.1-201ENST00000548280 FGD5Q6ZNL6 1462 aa17.52■□□□□ 0.4
AL139023.1-201ENST00000548280 SOGA1O94964 1423 aa17.5■□□□□ 0.39
AL139023.1-201ENST00000548280 CYB5RLQ6IPT4 315 aa17.48■□□□□ 0.39
AL139023.1-201ENST00000548280 SNAPC4Q5SXM2 1469 aa17.46■□□□□ 0.39
AL139023.1-201ENST00000548280 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
AL139023.1-201ENST00000548280 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
AL139023.1-201ENST00000548280 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
AL139023.1-201ENST00000548280 PBRM1Q86U86 1689 aa17.4■□□□□ 0.38
AL139023.1-201ENST00000548280 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
AL139023.1-201ENST00000548280 GRIN2BQ13224 1484 aa17.33■□□□□ 0.37
AL139023.1-201ENST00000548280 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
AL139023.1-201ENST00000548280 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
AL139023.1-201ENST00000548280 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
AL139023.1-201ENST00000548280 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
AL139023.1-201ENST00000548280 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
AL139023.1-201ENST00000548280 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
AL139023.1-201ENST00000548280 GAPVD1Q14C86 1478 aa17.29■□□□□ 0.36
AL139023.1-201ENST00000548280 ABCA10Q8WWZ4 1543 aa17.25■□□□□ 0.35
AL139023.1-201ENST00000548280 ERCC6L2Q5T890 1561 aa17.23■□□□□ 0.35
AL139023.1-201ENST00000548280 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
AL139023.1-201ENST00000548280 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
AL139023.1-201ENST00000548280 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
AL139023.1-201ENST00000548280 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
AL139023.1-201ENST00000548280 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
AL139023.1-201ENST00000548280 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
AL139023.1-201ENST00000548280 NUP160Q12769 1436 aa17.06■□□□□ 0.32
AL139023.1-201ENST00000548280 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
AL139023.1-201ENST00000548280 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
AL139023.1-201ENST00000548280 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
AL139023.1-201ENST00000548280 KIF13AQ9H1H9 1805 aa16.95■□□□□ 0.3
AL139023.1-201ENST00000548280 RUSC2Q8N2Y8 1516 aa16.94■□□□□ 0.3
AL139023.1-201ENST00000548280 PRG4Q92954 1404 aaPredicted RBP16.94■□□□□ 0.3
AL139023.1-201ENST00000548280 JPH4Q96JJ6 628 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms