RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 NISCHQ9Y2I1 1504 aa37.16■■■■□ 3.54
RNF41-205ENST00000548225 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
RNF41-205ENST00000548225 ABCC9O60706 1549 aa32.43■■■□□ 2.78
RNF41-205ENST00000548225 RB1CC1Q8TDY2 1594 aa31.24■■■□□ 2.59
RNF41-205ENST00000548225 NACADO15069 1562 aa31.18■■■□□ 2.58
RNF41-205ENST00000548225 MYO15BQ96JP2 1530 aa31■■■□□ 2.55
RNF41-205ENST00000548225 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
RNF41-205ENST00000548225 ZCCHC6Q5VYS8 1495 aaKnown RBP30.95■■■□□ 2.55
RNF41-205ENST00000548225 DCAF1Q9Y4B6 1507 aa30.81■■■□□ 2.52
RNF41-205ENST00000548225 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
RNF41-205ENST00000548225 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
RNF41-205ENST00000548225 PABPN1Q86U42 306 aaKnown RBP eCLIP30.23■■■□□ 2.43
RNF41-205ENST00000548225 SCRIBQ14160 1630 aa30.16■■■□□ 2.42
RNF41-205ENST00000548225 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
RNF41-205ENST00000548225 DNAJC5BQ9UF47 199 aa29.79■■■□□ 2.36
RNF41-205ENST00000548225 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
RNF41-205ENST00000548225 CC2D2AQ9P2K1 1620 aa29.37■■■□□ 2.29
RNF41-205ENST00000548225 CECR2Q9BXF3 1484 aa29.18■■■□□ 2.26
RNF41-205ENST00000548225 SMARCA4P51532 1647 aa28.87■■■□□ 2.21
RNF41-205ENST00000548225 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
RNF41-205ENST00000548225 NCAPD3P42695 1498 aa28.75■■■□□ 2.19
RNF41-205ENST00000548225 SMARCA2P51531 1590 aa28.73■■■□□ 2.19
RNF41-205ENST00000548225 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
RNF41-205ENST00000548225 PEG3Q9GZU2 1588 aa28.63■■■□□ 2.17
RNF41-205ENST00000548225 HMGXB3Q12766 1538 aa28.63■■■□□ 2.17
RNF41-205ENST00000548225 MROH2BQ7Z745 1585 aa28.6■■■□□ 2.17
RNF41-205ENST00000548225 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
RNF41-205ENST00000548225 WIZO95785 1651 aa28.29■■■□□ 2.12
RNF41-205ENST00000548225 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
RNF41-205ENST00000548225 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
RNF41-205ENST00000548225 LAMC3Q9Y6N6 1575 aa28.03■■■□□ 2.08
RNF41-205ENST00000548225 NESP48681 1621 aa28.02■■■□□ 2.08
RNF41-205ENST00000548225 ERCC6Q03468 1493 aa28■■■□□ 2.07
RNF41-205ENST00000548225 CADPSQ9ULU8 1353 aa27.88■■■□□ 2.05
RNF41-205ENST00000548225 PDS5BQ9NTI5 1447 aa27.83■■■□□ 2.05
RNF41-205ENST00000548225 CUX2O14529 1486 aa27.79■■■□□ 2.04
RNF41-205ENST00000548225 KIF21AQ7Z4S6 1674 aa27.73■■■□□ 2.03
RNF41-205ENST00000548225 CFTRP13569 1480 aa27.71■■■□□ 2.03
RNF41-205ENST00000548225 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
RNF41-205ENST00000548225 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
RNF41-205ENST00000548225 FANCD2Q9BXW9 1451 aa27.57■■■□□ 2
RNF41-205ENST00000548225 CEP164Q9UPV0 1460 aa27.56■■■□□ 2
RNF41-205ENST00000548225 PRDM2Q13029 1718 aa27.55■■■□□ 2
RNF41-205ENST00000548225 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
RNF41-205ENST00000548225 WDR62O43379 1518 aa27.47■■□□□ 1.99
RNF41-205ENST00000548225 SUPT5HO00267 1087 aaKnown RBP27.35■■□□□ 1.97
RNF41-205ENST00000548225 URB2Q14146 1524 aaKnown RBP27.28■■□□□ 1.96
RNF41-205ENST00000548225 ABCC8Q09428 1581 aa27.16■■□□□ 1.94
RNF41-205ENST00000548225 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
RNF41-205ENST00000548225 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
RNF41-205ENST00000548225 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
RNF41-205ENST00000548225 IFT140Q96RY7 1462 aa27■■□□□ 1.91
RNF41-205ENST00000548225 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
RNF41-205ENST00000548225 CUX1P39880 1505 aa26.85■■□□□ 1.89
RNF41-205ENST00000548225 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
RNF41-205ENST00000548225 ZNF608Q9ULD9 1512 aaPredicted RBP26.82■■□□□ 1.88
RNF41-205ENST00000548225 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
RNF41-205ENST00000548225 EIF4G3O43432 1585 aaKnown RBP26.76■■□□□ 1.87
RNF41-205ENST00000548225 SOGA1O94964 1423 aa26.74■■□□□ 1.87
RNF41-205ENST00000548225 RAD54L2Q9Y4B4 1467 aa26.71■■□□□ 1.87
RNF41-205ENST00000548225 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
RNF41-205ENST00000548225 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
RNF41-205ENST00000548225 AQRO60306 1485 aaKnown RBP eCLIP26.64■■□□□ 1.86
RNF41-205ENST00000548225 BIVM-ERCC5R4GMW8 1640 aa26.64■■□□□ 1.85
RNF41-205ENST00000548225 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
RNF41-205ENST00000548225 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
RNF41-205ENST00000548225 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.84
RNF41-205ENST00000548225 OSCARQ8IYS5 282 aa26.56■■□□□ 1.84
RNF41-205ENST00000548225 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
RNF41-205ENST00000548225 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
RNF41-205ENST00000548225 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
RNF41-205ENST00000548225 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
RNF41-205ENST00000548225 MAGI1Q96QZ7 1491 aaPredicted RBP26.45■■□□□ 1.82
RNF41-205ENST00000548225 CHD1O14646 1710 aa26.44■■□□□ 1.82
RNF41-205ENST00000548225 SNAPC4Q5SXM2 1469 aa26.43■■□□□ 1.82
RNF41-205ENST00000548225 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
RNF41-205ENST00000548225 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
RNF41-205ENST00000548225 FBLN2P98095 1184 aa26.32■■□□□ 1.8
RNF41-205ENST00000548225 CHMP7Q8WUX9 453 aaPredicted RBP26.27■■□□□ 1.8
RNF41-205ENST00000548225 ERICH3Q5RHP9 1530 aa26.25■■□□□ 1.79
RNF41-205ENST00000548225 ADAMTS12P58397 1594 aa26.21■■□□□ 1.79
RNF41-205ENST00000548225 CLASP1Q7Z460 1538 aa26.17■■□□□ 1.78
RNF41-205ENST00000548225 RIMBP3CA6NJZ7 1639 aa26.17■■□□□ 1.78
RNF41-205ENST00000548225 RIMBP3BA6NNM3 1639 aa26.17■■□□□ 1.78
RNF41-205ENST00000548225 RIMBP3Q9UFD9 1639 aa26.17■■□□□ 1.78
RNF41-205ENST00000548225 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
RNF41-205ENST00000548225 ARHGEF11O15085 1522 aa26.15■■□□□ 1.78
RNF41-205ENST00000548225 GRIN2AQ12879 1464 aa26.13■■□□□ 1.77
RNF41-205ENST00000548225 KIF27Q86VH2 1401 aa26.12■■□□□ 1.77
RNF41-205ENST00000548225 NUP160Q12769 1436 aa26.03■■□□□ 1.76
RNF41-205ENST00000548225 CUL7Q14999 1698 aa26■■□□□ 1.75
RNF41-205ENST00000548225 TRIM41Q8WV44 630 aa26■■□□□ 1.75
RNF41-205ENST00000548225 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
RNF41-205ENST00000548225 IGF1RP08069 1367 aa25.98■■□□□ 1.75
RNF41-205ENST00000548225 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
RNF41-205ENST00000548225 SHROOM2Q13796 1616 aa25.86■■□□□ 1.73
RNF41-205ENST00000548225 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
RNF41-205ENST00000548225 CARMIL1Q5VZK9 1371 aa25.84■■□□□ 1.73
RNF41-205ENST00000548225 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.73
RNF41-205ENST00000548225 KIAA0586Q9BVV6 1533 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms