RNA–Protein interactions for RNA: ENST00000548215.1

LINC02403-201, Transcript of long intergenic non-protein coding RNA 2403, humanhuman

TSL 3 BASIC

Gene LINC02403, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02403-201ENST00000548215 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
LINC02403-201ENST00000548215 ABCC9O60706 1549 aa22.75■■□□□ 1.23
LINC02403-201ENST00000548215 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
LINC02403-201ENST00000548215 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
LINC02403-201ENST00000548215 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
LINC02403-201ENST00000548215 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
LINC02403-201ENST00000548215 NACADO15069 1562 aa21.02■□□□□ 0.95
LINC02403-201ENST00000548215 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
LINC02403-201ENST00000548215 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
LINC02403-201ENST00000548215 BICRAQ9NZM4 1560 aa20.75■□□□□ 0.91
LINC02403-201ENST00000548215 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
LINC02403-201ENST00000548215 MYO15BQ96JP2 1530 aa20.49■□□□□ 0.87
LINC02403-201ENST00000548215 CC2D2AQ9P2K1 1620 aa20.47■□□□□ 0.87
LINC02403-201ENST00000548215 DNAJC5Q9H3Z4 198 aa20.47■□□□□ 0.87
LINC02403-201ENST00000548215 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
LINC02403-201ENST00000548215 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
LINC02403-201ENST00000548215 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
LINC02403-201ENST00000548215 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
LINC02403-201ENST00000548215 DCAF1Q9Y4B6 1507 aa20.04■□□□□ 0.8
LINC02403-201ENST00000548215 CUX2O14529 1486 aa19.75■□□□□ 0.75
LINC02403-201ENST00000548215 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
LINC02403-201ENST00000548215 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
LINC02403-201ENST00000548215 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
LINC02403-201ENST00000548215 NESP48681 1621 aa19.39■□□□□ 0.69
LINC02403-201ENST00000548215 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
LINC02403-201ENST00000548215 THOC2Q8NI27 1593 aaKnown RBP19.22■□□□□ 0.67
LINC02403-201ENST00000548215 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
LINC02403-201ENST00000548215 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
LINC02403-201ENST00000548215 SMARCA4P51532 1647 aa19.14■□□□□ 0.65
LINC02403-201ENST00000548215 BAZ1BQ9UIG0 1483 aaKnown RBP19.1■□□□□ 0.65
LINC02403-201ENST00000548215 KIF21AQ7Z4S6 1674 aa19.07■□□□□ 0.64
LINC02403-201ENST00000548215 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
LINC02403-201ENST00000548215 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
LINC02403-201ENST00000548215 BAZ1AQ9NRL2 1556 aaPredicted RBP18.94■□□□□ 0.62
LINC02403-201ENST00000548215 PEG3Q9GZU2 1588 aa18.9■□□□□ 0.62
LINC02403-201ENST00000548215 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
LINC02403-201ENST00000548215 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
LINC02403-201ENST00000548215 OSCARQ8IYS5 282 aa18.85■□□□□ 0.61
LINC02403-201ENST00000548215 MROH2BQ7Z745 1585 aa18.82■□□□□ 0.6
LINC02403-201ENST00000548215 WDR62O43379 1518 aa18.82■□□□□ 0.6
LINC02403-201ENST00000548215 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
LINC02403-201ENST00000548215 FANCD2Q9BXW9 1451 aa18.64■□□□□ 0.57
LINC02403-201ENST00000548215 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
LINC02403-201ENST00000548215 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
LINC02403-201ENST00000548215 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
LINC02403-201ENST00000548215 WIZO95785 1651 aa18.57■□□□□ 0.56
LINC02403-201ENST00000548215 URB2Q14146 1524 aaKnown RBP18.53■□□□□ 0.56
LINC02403-201ENST00000548215 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
LINC02403-201ENST00000548215 CYB5RLQ6IPT4 315 aa18.49■□□□□ 0.55
LINC02403-201ENST00000548215 CFTRP13569 1480 aa18.49■□□□□ 0.55
LINC02403-201ENST00000548215 TRHP20396 242 aaPredicted RBP18.48■□□□□ 0.55
LINC02403-201ENST00000548215 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
LINC02403-201ENST00000548215 AEBP2Q6ZN18 517 aaPredicted RBP18.35■□□□□ 0.53
LINC02403-201ENST00000548215 IFT140Q96RY7 1462 aa18.33■□□□□ 0.53
LINC02403-201ENST00000548215 ARAP1Q96P48 1450 aa18.29■□□□□ 0.52
LINC02403-201ENST00000548215 FBLN2P98095 1184 aa18.25■□□□□ 0.51
LINC02403-201ENST00000548215 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
LINC02403-201ENST00000548215 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
LINC02403-201ENST00000548215 EIF4G3O43432 1585 aaKnown RBP18.22■□□□□ 0.51
LINC02403-201ENST00000548215 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
LINC02403-201ENST00000548215 CHD1O14646 1710 aa18.21■□□□□ 0.51
LINC02403-201ENST00000548215 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
LINC02403-201ENST00000548215 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.5
LINC02403-201ENST00000548215 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
LINC02403-201ENST00000548215 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
LINC02403-201ENST00000548215 TARBP1Q13395 1621 aaKnown RBP18.08■□□□□ 0.48
LINC02403-201ENST00000548215 DNMBPQ6XZF7 1577 aa18.07■□□□□ 0.48
LINC02403-201ENST00000548215 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
LINC02403-201ENST00000548215 RAD54L2Q9Y4B4 1467 aa18■□□□□ 0.47
LINC02403-201ENST00000548215 POLA1P09884 1462 aaPredicted RBP17.99■□□□□ 0.47
LINC02403-201ENST00000548215 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
LINC02403-201ENST00000548215 CLASP1Q7Z460 1538 aa17.97■□□□□ 0.47
LINC02403-201ENST00000548215 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
LINC02403-201ENST00000548215 SOGA1O94964 1423 aa17.94■□□□□ 0.46
LINC02403-201ENST00000548215 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
LINC02403-201ENST00000548215 GAPVD1Q14C86 1478 aa17.86■□□□□ 0.45
LINC02403-201ENST00000548215 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.45
LINC02403-201ENST00000548215 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
LINC02403-201ENST00000548215 FGD5Q6ZNL6 1462 aa17.81■□□□□ 0.44
LINC02403-201ENST00000548215 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
LINC02403-201ENST00000548215 WDR97A6NE52 1622 aa17.77■□□□□ 0.44
LINC02403-201ENST00000548215 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
LINC02403-201ENST00000548215 CUX1P39880 1505 aa17.72■□□□□ 0.43
LINC02403-201ENST00000548215 PBRM1Q86U86 1689 aa17.68■□□□□ 0.42
LINC02403-201ENST00000548215 ILDR1Q86SU0 546 aaPredicted RBP17.61■□□□□ 0.41
LINC02403-201ENST00000548215 KIF13AQ9H1H9 1805 aa17.61■□□□□ 0.41
LINC02403-201ENST00000548215 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
LINC02403-201ENST00000548215 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
LINC02403-201ENST00000548215 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
LINC02403-201ENST00000548215 KDM4FA0A1W2PPD8 638 aa17.55■□□□□ 0.4
LINC02403-201ENST00000548215 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
LINC02403-201ENST00000548215 FAM69CQ0P6D2 419 aa17.54■□□□□ 0.4
LINC02403-201ENST00000548215 NUP160Q12769 1436 aa17.53■□□□□ 0.4
LINC02403-201ENST00000548215 SHROOM2Q13796 1616 aa17.49■□□□□ 0.39
LINC02403-201ENST00000548215 ADAMTS12P58397 1594 aa17.47■□□□□ 0.39
LINC02403-201ENST00000548215 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
LINC02403-201ENST00000548215 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
LINC02403-201ENST00000548215 NPM1P06748 294 aaKnown RBP eCLIP17.44■□□□□ 0.38
LINC02403-201ENST00000548215 JPH4Q96JJ6 628 aa17.43■□□□□ 0.38
LINC02403-201ENST00000548215 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms