RNA–Protein interactions for RNA: ENST00000548206.1

CSRNP2-203, Transcript of cysteine and serine rich nuclear protein 2, humanhuman

TSL 3

Gene CSRNP2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRNP2-203ENST00000548206 NISCHQ9Y2I1 1504 aa53.51■■■■■ 6.16
CSRNP2-203ENST00000548206 CCDC180Q9P1Z9 1646 aa47.6■■■■■ 5.21
CSRNP2-203ENST00000548206 ABCC9O60706 1549 aa46.79■■■■■ 5.08
CSRNP2-203ENST00000548206 RB1CC1Q8TDY2 1594 aa44.9■■■■■ 4.78
CSRNP2-203ENST00000548206 DCAF8L2P0C7V8 631 aa44.88■■■■■ 4.78
CSRNP2-203ENST00000548206 NACADO15069 1562 aa44.8■■■■■ 4.76
CSRNP2-203ENST00000548206 ZCCHC6Q5VYS8 1495 aaKnown RBP44.54■■■■■ 4.72
CSRNP2-203ENST00000548206 MYO15BQ96JP2 1530 aa44.45■■■■■ 4.71
CSRNP2-203ENST00000548206 DCAF1Q9Y4B6 1507 aa44.22■■■■■ 4.67
CSRNP2-203ENST00000548206 UNC13AQ9UPW8 1703 aa43.86■■■■■ 4.61
CSRNP2-203ENST00000548206 PABPN1Q86U42 306 aaKnown RBP eCLIP43.72■■■■■ 4.59
CSRNP2-203ENST00000548206 BICRAQ9NZM4 1560 aa43.53■■■■■ 4.56
CSRNP2-203ENST00000548206 SCRIBQ14160 1630 aa43.49■■■■■ 4.55
CSRNP2-203ENST00000548206 DNAJC5BQ9UF47 199 aa43.3■■■■■ 4.52
CSRNP2-203ENST00000548206 SHROOM4Q9ULL8 1493 aa43.02■■■■■ 4.48
CSRNP2-203ENST00000548206 EIF4G1Q04637 1599 aaKnown RBP42.41■■■■■ 4.38
CSRNP2-203ENST00000548206 CC2D2AQ9P2K1 1620 aa42.28■■■■■ 4.36
CSRNP2-203ENST00000548206 CECR2Q9BXF3 1484 aa42.03■■■■■ 4.32
CSRNP2-203ENST00000548206 SMARCA4P51532 1647 aa41.55■■■■■ 4.24
CSRNP2-203ENST00000548206 BAZ1AQ9NRL2 1556 aaPredicted RBP41.48■■■■■ 4.23
CSRNP2-203ENST00000548206 ATAD2BQ9ULI0 1458 aa41.36■■■■■ 4.21
CSRNP2-203ENST00000548206 NCAPD3P42695 1498 aa41.34■■■■■ 4.21
CSRNP2-203ENST00000548206 SMARCA2P51531 1590 aa41.29■■■■■ 4.2
CSRNP2-203ENST00000548206 MROH2BQ7Z745 1585 aa41.25■■■■■ 4.19
CSRNP2-203ENST00000548206 HMGXB3Q12766 1538 aa41.12■■■■■ 4.17
CSRNP2-203ENST00000548206 PEG3Q9GZU2 1588 aa41.11■■■■■ 4.17
CSRNP2-203ENST00000548206 BAZ1BQ9UIG0 1483 aaKnown RBP41.03■■■■■ 4.16
CSRNP2-203ENST00000548206 WIZO95785 1651 aa40.82■■■■■ 4.12
CSRNP2-203ENST00000548206 RSF1Q96T23 1441 aaPredicted RBP40.73■■■■■ 4.11
CSRNP2-203ENST00000548206 NESP48681 1621 aa40.44■■■■■ 4.06
CSRNP2-203ENST00000548206 TOP2AP11388 1531 aaKnown RBP40.36■■■■■ 4.05
CSRNP2-203ENST00000548206 ERCC6Q03468 1493 aa40.34■■■■■ 4.05
CSRNP2-203ENST00000548206 SUPT5HO00267 1087 aaKnown RBP40.33■■■■■ 4.05
CSRNP2-203ENST00000548206 LAMC3Q9Y6N6 1575 aa40.27■■■■■ 4.04
CSRNP2-203ENST00000548206 CADPSQ9ULU8 1353 aa40.15■■■■■ 4.02
CSRNP2-203ENST00000548206 PDS5BQ9NTI5 1447 aa40.03■■■■■ 4
CSRNP2-203ENST00000548206 KIF21AQ7Z4S6 1674 aa39.93■■■■□ 3.98
CSRNP2-203ENST00000548206 CCDC88BA6NC98 1476 aa39.9■■■■□ 3.98
CSRNP2-203ENST00000548206 CUX2O14529 1486 aa39.9■■■■□ 3.98
CSRNP2-203ENST00000548206 CFTRP13569 1480 aa39.88■■■■□ 3.97
CSRNP2-203ENST00000548206 THOC2Q8NI27 1593 aaKnown RBP39.81■■■■□ 3.96
CSRNP2-203ENST00000548206 FANCD2Q9BXW9 1451 aa39.7■■■■□ 3.95
CSRNP2-203ENST00000548206 CEP164Q9UPV0 1460 aa39.67■■■■□ 3.94
CSRNP2-203ENST00000548206 MRC2Q9UBG0 1479 aa39.63■■■■□ 3.94
CSRNP2-203ENST00000548206 PRDM2Q13029 1718 aa39.54■■■■□ 3.92
CSRNP2-203ENST00000548206 WDR62O43379 1518 aa39.48■■■■□ 3.91
CSRNP2-203ENST00000548206 DNAJC5Q9H3Z4 198 aa39.43■■■■□ 3.9
CSRNP2-203ENST00000548206 URB2Q14146 1524 aaKnown RBP39.31■■■■□ 3.88
CSRNP2-203ENST00000548206 TOPBP1Q92547 1522 aa39.05■■■■□ 3.84
CSRNP2-203ENST00000548206 ABCC8Q09428 1581 aa39.01■■■■□ 3.84
CSRNP2-203ENST00000548206 DNMBPQ6XZF7 1577 aa38.99■■■■□ 3.83
CSRNP2-203ENST00000548206 IFT140Q96RY7 1462 aa38.83■■■■□ 3.81
CSRNP2-203ENST00000548206 CUX1P39880 1505 aa38.71■■■■□ 3.79
CSRNP2-203ENST00000548206 POLA1P09884 1462 aaPredicted RBP38.71■■■■□ 3.79
CSRNP2-203ENST00000548206 ZNF608Q9ULD9 1512 aaPredicted RBP38.68■■■■□ 3.78
CSRNP2-203ENST00000548206 FGD5Q6ZNL6 1462 aa38.61■■■■□ 3.77
CSRNP2-203ENST00000548206 TARBP1Q13395 1621 aaKnown RBP38.61■■■■□ 3.77
CSRNP2-203ENST00000548206 RAD54L2Q9Y4B4 1467 aa38.58■■■■□ 3.77
CSRNP2-203ENST00000548206 SOGA1O94964 1423 aa38.56■■■■□ 3.76
CSRNP2-203ENST00000548206 EIF4G3O43432 1585 aaKnown RBP38.52■■■■□ 3.76
CSRNP2-203ENST00000548206 AQRO60306 1485 aaKnown RBP eCLIP38.47■■■■□ 3.75
CSRNP2-203ENST00000548206 WRNQ14191 1432 aaPredicted RBP eCLIP38.42■■■■□ 3.74
CSRNP2-203ENST00000548206 TDRD9Q8NDG6 1382 aaKnown RBP38.38■■■■□ 3.73
CSRNP2-203ENST00000548206 SYNJ1O43426 1573 aa38.33■■■■□ 3.73
CSRNP2-203ENST00000548206 TOP2BQ02880 1626 aa38.33■■■■□ 3.73
CSRNP2-203ENST00000548206 BIVM-ERCC5R4GMW8 1640 aa38.32■■■■□ 3.73
CSRNP2-203ENST00000548206 OSCARQ8IYS5 282 aa38.27■■■■□ 3.72
CSRNP2-203ENST00000548206 WDR97A6NE52 1622 aa38.27■■■■□ 3.72
CSRNP2-203ENST00000548206 ABCA10Q8WWZ4 1543 aa38.21■■■■□ 3.71
CSRNP2-203ENST00000548206 GRIN2BQ13224 1484 aa38.11■■■■□ 3.69
CSRNP2-203ENST00000548206 GAPVD1Q14C86 1478 aa38.11■■■■□ 3.69
CSRNP2-203ENST00000548206 SNAPC4Q5SXM2 1469 aa38.1■■■■□ 3.69
CSRNP2-203ENST00000548206 FBLN2P98095 1184 aa38.08■■■■□ 3.69
CSRNP2-203ENST00000548206 ABCA5Q8WWZ7 1642 aa38.06■■■■□ 3.68
CSRNP2-203ENST00000548206 CHD1O14646 1710 aa38.05■■■■□ 3.68
CSRNP2-203ENST00000548206 PBRM1Q86U86 1689 aa38.02■■■■□ 3.68
CSRNP2-203ENST00000548206 TRIM41Q8WV44 630 aa38.02■■■■□ 3.68
CSRNP2-203ENST00000548206 MAGI1Q96QZ7 1491 aaPredicted RBP38.01■■■■□ 3.67
CSRNP2-203ENST00000548206 CHIC1Q5VXU3 224 aa37.99■■■■□ 3.67
CSRNP2-203ENST00000548206 CHMP7Q8WUX9 453 aaPredicted RBP37.92■■■■□ 3.66
CSRNP2-203ENST00000548206 SYNJ2O15056 1496 aa37.88■■■■□ 3.65
CSRNP2-203ENST00000548206 ERICH3Q5RHP9 1530 aa37.74■■■■□ 3.63
CSRNP2-203ENST00000548206 ADAMTS12P58397 1594 aa37.72■■■■□ 3.63
CSRNP2-203ENST00000548206 RIMBP3CA6NJZ7 1639 aa37.7■■■■□ 3.63
CSRNP2-203ENST00000548206 RIMBP3BA6NNM3 1639 aa37.7■■■■□ 3.63
CSRNP2-203ENST00000548206 RIMBP3Q9UFD9 1639 aa37.7■■■■□ 3.63
CSRNP2-203ENST00000548206 FHAD1B1AJZ9 1412 aa37.66■■■■□ 3.62
CSRNP2-203ENST00000548206 KIF27Q86VH2 1401 aa37.63■■■■□ 3.61
CSRNP2-203ENST00000548206 ARHGEF11O15085 1522 aa37.63■■■■□ 3.61
CSRNP2-203ENST00000548206 GRIN2AQ12879 1464 aa37.63■■■■□ 3.61
CSRNP2-203ENST00000548206 CLASP1Q7Z460 1538 aa37.62■■■■□ 3.61
CSRNP2-203ENST00000548206 IGF1RP08069 1367 aa37.49■■■■□ 3.59
CSRNP2-203ENST00000548206 NUP160Q12769 1436 aa37.45■■■■□ 3.59
CSRNP2-203ENST00000548206 CEP170Q5SW79 1584 aa37.44■■■■□ 3.58
CSRNP2-203ENST00000548206 CUL7Q14999 1698 aa37.37■■■■□ 3.57
CSRNP2-203ENST00000548206 RUSC2Q8N2Y8 1516 aa37.36■■■■□ 3.57
CSRNP2-203ENST00000548206 CYB5RLQ6IPT4 315 aa37.34■■■■□ 3.57
CSRNP2-203ENST00000548206 ARAP1Q96P48 1450 aa37.33■■■■□ 3.57
CSRNP2-203ENST00000548206 CARMIL1Q5VZK9 1371 aa37.28■■■■□ 3.56
CSRNP2-203ENST00000548206 EEA1Q15075 1411 aa37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms