RNA–Protein interactions for RNA: ENST00000548197.5

RPH3A-212, Transcript of rabphilin 3A, humanhuman

TSL 4

Gene RPH3A, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-212ENST00000548197 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
RPH3A-212ENST00000548197 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
RPH3A-212ENST00000548197 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
RPH3A-212ENST00000548197 ABCC9O60706 1549 aa18.33■□□□□ 0.52
RPH3A-212ENST00000548197 CCDC180Q9P1Z9 1646 aa18.14■□□□□ 0.49
RPH3A-212ENST00000548197 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
RPH3A-212ENST00000548197 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
RPH3A-212ENST00000548197 NACADO15069 1562 aa17.19■□□□□ 0.34
RPH3A-212ENST00000548197 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
RPH3A-212ENST00000548197 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
RPH3A-212ENST00000548197 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
RPH3A-212ENST00000548197 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
RPH3A-212ENST00000548197 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.28
RPH3A-212ENST00000548197 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
RPH3A-212ENST00000548197 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
RPH3A-212ENST00000548197 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
RPH3A-212ENST00000548197 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
RPH3A-212ENST00000548197 CC2D2AQ9P2K1 1620 aa16.54■□□□□ 0.24
RPH3A-212ENST00000548197 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
RPH3A-212ENST00000548197 SCRIBQ14160 1630 aa16.53■□□□□ 0.24
RPH3A-212ENST00000548197 EIF4G1Q04637 1599 aaKnown RBP16.46■□□□□ 0.23
RPH3A-212ENST00000548197 DNAJC5Q9H3Z4 198 aa16.06■□□□□ 0.16
RPH3A-212ENST00000548197 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
RPH3A-212ENST00000548197 CUX2O14529 1486 aa15.88■□□□□ 0.13
RPH3A-212ENST00000548197 ERCC6Q03468 1493 aa15.88■□□□□ 0.13
RPH3A-212ENST00000548197 NCAPD3P42695 1498 aa15.85■□□□□ 0.13
RPH3A-212ENST00000548197 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
RPH3A-212ENST00000548197 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
RPH3A-212ENST00000548197 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
RPH3A-212ENST00000548197 SMARCA4P51532 1647 aa15.73■□□□□ 0.11
RPH3A-212ENST00000548197 NESP48681 1621 aa15.68■□□□□ 0.1
RPH3A-212ENST00000548197 SENP3Q9H4L4 574 aaPredicted RBP15.66■□□□□ 0.1
RPH3A-212ENST00000548197 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
RPH3A-212ENST00000548197 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
RPH3A-212ENST00000548197 THOC2Q8NI27 1593 aaKnown RBP15.56■□□□□ 0.08
RPH3A-212ENST00000548197 PEG3Q9GZU2 1588 aa15.56■□□□□ 0.08
RPH3A-212ENST00000548197 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
RPH3A-212ENST00000548197 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
RPH3A-212ENST00000548197 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
RPH3A-212ENST00000548197 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
RPH3A-212ENST00000548197 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
RPH3A-212ENST00000548197 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
RPH3A-212ENST00000548197 TRIM41Q8WV44 630 aa15.33■□□□□ 0.04
RPH3A-212ENST00000548197 WDR62O43379 1518 aa15.31■□□□□ 0.04
RPH3A-212ENST00000548197 WIZO95785 1651 aa15.31■□□□□ 0.04
RPH3A-212ENST00000548197 CEP164Q9UPV0 1460 aa15.27■□□□□ 0.03
RPH3A-212ENST00000548197 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
RPH3A-212ENST00000548197 CFTRP13569 1480 aa15.16■□□□□ 0.02
RPH3A-212ENST00000548197 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
RPH3A-212ENST00000548197 TOP2AP11388 1531 aaKnown RBP15.1■□□□□ 0.01
RPH3A-212ENST00000548197 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
RPH3A-212ENST00000548197 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
RPH3A-212ENST00000548197 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
RPH3A-212ENST00000548197 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
RPH3A-212ENST00000548197 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
RPH3A-212ENST00000548197 RIMBP3CA6NJZ7 1639 aa14.94□□□□□ -0.02
RPH3A-212ENST00000548197 RIMBP3BA6NNM3 1639 aa14.94□□□□□ -0.02
RPH3A-212ENST00000548197 RIMBP3Q9UFD9 1639 aa14.94□□□□□ -0.02
RPH3A-212ENST00000548197 ZNF608Q9ULD9 1512 aaPredicted RBP14.93□□□□□ -0.02
RPH3A-212ENST00000548197 CCDC88BA6NC98 1476 aa14.93□□□□□ -0.02
RPH3A-212ENST00000548197 TOPBP1Q92547 1522 aa14.9□□□□□ -0.02
RPH3A-212ENST00000548197 KCNA4P22459 653 aa14.89□□□□□ -0.03
RPH3A-212ENST00000548197 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
RPH3A-212ENST00000548197 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
RPH3A-212ENST00000548197 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
RPH3A-212ENST00000548197 DNMBPQ6XZF7 1577 aa14.84□□□□□ -0.03
RPH3A-212ENST00000548197 CYB5RLQ6IPT4 315 aa14.8□□□□□ -0.04
RPH3A-212ENST00000548197 CHD1O14646 1710 aa14.78□□□□□ -0.04
RPH3A-212ENST00000548197 AQRO60306 1485 aaKnown RBP eCLIP14.78□□□□□ -0.04
RPH3A-212ENST00000548197 FBLN2P98095 1184 aa14.77□□□□□ -0.05
RPH3A-212ENST00000548197 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.05
RPH3A-212ENST00000548197 POLA1P09884 1462 aaPredicted RBP14.73□□□□□ -0.05
RPH3A-212ENST00000548197 ADRA2BP18089 450 aa14.72□□□□□ -0.05
RPH3A-212ENST00000548197 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
RPH3A-212ENST00000548197 ARAP1Q96P48 1450 aa14.7□□□□□ -0.06
RPH3A-212ENST00000548197 SOGA1O94964 1423 aa14.68□□□□□ -0.06
RPH3A-212ENST00000548197 RAD54L2Q9Y4B4 1467 aa14.68□□□□□ -0.06
RPH3A-212ENST00000548197 TDRD9Q8NDG6 1382 aaKnown RBP14.66□□□□□ -0.06
RPH3A-212ENST00000548197 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
RPH3A-212ENST00000548197 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
RPH3A-212ENST00000548197 FGD5Q6ZNL6 1462 aa14.62□□□□□ -0.07
RPH3A-212ENST00000548197 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
RPH3A-212ENST00000548197 SYNJ1O43426 1573 aa14.6□□□□□ -0.07
RPH3A-212ENST00000548197 MAGI1Q96QZ7 1491 aaPredicted RBP14.59□□□□□ -0.07
RPH3A-212ENST00000548197 CLASP1Q7Z460 1538 aa14.59□□□□□ -0.07
RPH3A-212ENST00000548197 GRIN2BQ13224 1484 aa14.57□□□□□ -0.08
RPH3A-212ENST00000548197 CUX1P39880 1505 aa14.56□□□□□ -0.08
RPH3A-212ENST00000548197 SYNJ2O15056 1496 aa14.55□□□□□ -0.08
RPH3A-212ENST00000548197 PBRM1Q86U86 1689 aa14.51□□□□□ -0.09
RPH3A-212ENST00000548197 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
RPH3A-212ENST00000548197 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
RPH3A-212ENST00000548197 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
RPH3A-212ENST00000548197 ABCA10Q8WWZ4 1543 aa14.44□□□□□ -0.1
RPH3A-212ENST00000548197 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
RPH3A-212ENST00000548197 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
RPH3A-212ENST00000548197 GRIN2AQ12879 1464 aa14.38□□□□□ -0.11
RPH3A-212ENST00000548197 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
RPH3A-212ENST00000548197 ADAMTS12P58397 1594 aa14.34□□□□□ -0.11
RPH3A-212ENST00000548197 ERCC6L2Q5T890 1561 aa14.34□□□□□ -0.11
RPH3A-212ENST00000548197 SUPT5HO00267 1087 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms