RNA–Protein interactions for RNA: ENST00000548190.1

PCBP2-212, Transcript of poly(rC) binding protein 2, humanhuman

TSL 5

Gene PCBP2, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-212ENST00000548190 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
PCBP2-212ENST00000548190 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
PCBP2-212ENST00000548190 ABCC9O60706 1549 aa24.82■■□□□ 1.56
PCBP2-212ENST00000548190 DCAF8L2P0C7V8 631 aa23.73■■□□□ 1.39
PCBP2-212ENST00000548190 RB1CC1Q8TDY2 1594 aa23.73■■□□□ 1.39
PCBP2-212ENST00000548190 NACADO15069 1562 aa23.68■■□□□ 1.38
PCBP2-212ENST00000548190 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
PCBP2-212ENST00000548190 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
PCBP2-212ENST00000548190 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
PCBP2-212ENST00000548190 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
PCBP2-212ENST00000548190 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
PCBP2-212ENST00000548190 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
PCBP2-212ENST00000548190 BICRAQ9NZM4 1560 aa23.05■■□□□ 1.28
PCBP2-212ENST00000548190 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
PCBP2-212ENST00000548190 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.24
PCBP2-212ENST00000548190 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
PCBP2-212ENST00000548190 CC2D2AQ9P2K1 1620 aa22.4■■□□□ 1.18
PCBP2-212ENST00000548190 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
PCBP2-212ENST00000548190 NCAPD3P42695 1498 aa21.93■■□□□ 1.1
PCBP2-212ENST00000548190 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
PCBP2-212ENST00000548190 SMARCA4P51532 1647 aa21.83■■□□□ 1.08
PCBP2-212ENST00000548190 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
PCBP2-212ENST00000548190 SMARCA2P51531 1590 aa21.77■■□□□ 1.08
PCBP2-212ENST00000548190 MROH2BQ7Z745 1585 aa21.69■■□□□ 1.06
PCBP2-212ENST00000548190 HMGXB3Q12766 1538 aa21.68■■□□□ 1.06
PCBP2-212ENST00000548190 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
PCBP2-212ENST00000548190 BAZ1BQ9UIG0 1483 aaKnown RBP21.62■■□□□ 1.05
PCBP2-212ENST00000548190 NESP48681 1621 aa21.41■■□□□ 1.02
PCBP2-212ENST00000548190 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
PCBP2-212ENST00000548190 ERCC6Q03468 1493 aa21.39■■□□□ 1.02
PCBP2-212ENST00000548190 WIZO95785 1651 aa21.38■■□□□ 1.01
PCBP2-212ENST00000548190 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
PCBP2-212ENST00000548190 CUX2O14529 1486 aa21.28■■□□□ 1
PCBP2-212ENST00000548190 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
PCBP2-212ENST00000548190 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
PCBP2-212ENST00000548190 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
PCBP2-212ENST00000548190 CFTRP13569 1480 aa21.07■□□□□ 0.96
PCBP2-212ENST00000548190 DNAJC5Q9H3Z4 198 aa21.07■□□□□ 0.96
PCBP2-212ENST00000548190 THOC2Q8NI27 1593 aaKnown RBP21.05■□□□□ 0.96
PCBP2-212ENST00000548190 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.96
PCBP2-212ENST00000548190 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
PCBP2-212ENST00000548190 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
PCBP2-212ENST00000548190 MRC2Q9UBG0 1479 aa20.97■□□□□ 0.95
PCBP2-212ENST00000548190 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
PCBP2-212ENST00000548190 WDR62O43379 1518 aa20.88■□□□□ 0.93
PCBP2-212ENST00000548190 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
PCBP2-212ENST00000548190 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
PCBP2-212ENST00000548190 PRDM2Q13029 1718 aa20.65■□□□□ 0.9
PCBP2-212ENST00000548190 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
PCBP2-212ENST00000548190 TOPBP1Q92547 1522 aa20.6■□□□□ 0.89
PCBP2-212ENST00000548190 IFT140Q96RY7 1462 aa20.55■□□□□ 0.88
PCBP2-212ENST00000548190 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
PCBP2-212ENST00000548190 OSCARQ8IYS5 282 aa20.49■□□□□ 0.87
PCBP2-212ENST00000548190 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
PCBP2-212ENST00000548190 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
PCBP2-212ENST00000548190 SOGA1O94964 1423 aa20.39■□□□□ 0.85
PCBP2-212ENST00000548190 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.851e-6■■■□□ 16.4
PCBP2-212ENST00000548190 TARBP1Q13395 1621 aaKnown RBP20.36■□□□□ 0.85
PCBP2-212ENST00000548190 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
PCBP2-212ENST00000548190 CUX1P39880 1505 aa20.34■□□□□ 0.85
PCBP2-212ENST00000548190 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
PCBP2-212ENST00000548190 TDRD9Q8NDG6 1382 aaKnown RBP20.31■□□□□ 0.84
PCBP2-212ENST00000548190 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
PCBP2-212ENST00000548190 FBLN2P98095 1184 aa20.2■□□□□ 0.82
PCBP2-212ENST00000548190 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
PCBP2-212ENST00000548190 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
PCBP2-212ENST00000548190 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
PCBP2-212ENST00000548190 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
PCBP2-212ENST00000548190 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
PCBP2-212ENST00000548190 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
PCBP2-212ENST00000548190 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
PCBP2-212ENST00000548190 SNAPC4Q5SXM2 1469 aa20.1■□□□□ 0.81
PCBP2-212ENST00000548190 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.81
PCBP2-212ENST00000548190 TOP2BQ02880 1626 aa20.07■□□□□ 0.8
PCBP2-212ENST00000548190 BIVM-ERCC5R4GMW8 1640 aa20.04■□□□□ 0.8
PCBP2-212ENST00000548190 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
PCBP2-212ENST00000548190 CHD1O14646 1710 aa20.02■□□□□ 0.8
PCBP2-212ENST00000548190 SYNJ2O15056 1496 aa20.02■□□□□ 0.8
PCBP2-212ENST00000548190 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
PCBP2-212ENST00000548190 RIMBP3CA6NJZ7 1639 aa20■□□□□ 0.79
PCBP2-212ENST00000548190 RIMBP3BA6NNM3 1639 aa20■□□□□ 0.79
PCBP2-212ENST00000548190 RIMBP3Q9UFD9 1639 aa20■□□□□ 0.79
PCBP2-212ENST00000548190 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
PCBP2-212ENST00000548190 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
PCBP2-212ENST00000548190 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
PCBP2-212ENST00000548190 CLASP1Q7Z460 1538 aa19.91■□□□□ 0.78
PCBP2-212ENST00000548190 FHAD1B1AJZ9 1412 aa19.88■□□□□ 0.77
PCBP2-212ENST00000548190 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
PCBP2-212ENST00000548190 GRIN2AQ12879 1464 aa19.85■□□□□ 0.77
PCBP2-212ENST00000548190 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
PCBP2-212ENST00000548190 ADAMTS12P58397 1594 aa19.8■□□□□ 0.76
PCBP2-212ENST00000548190 NUP160Q12769 1436 aa19.8■□□□□ 0.76
PCBP2-212ENST00000548190 IGF1RP08069 1367 aa19.8■□□□□ 0.76
PCBP2-212ENST00000548190 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
PCBP2-212ENST00000548190 CEP170Q5SW79 1584 aa19.72■□□□□ 0.75
PCBP2-212ENST00000548190 JPH4Q96JJ6 628 aa19.71■□□□□ 0.75
PCBP2-212ENST00000548190 CARMIL1Q5VZK9 1371 aa19.64■□□□□ 0.73
PCBP2-212ENST00000548190 TRHP20396 242 aaPredicted RBP19.62■□□□□ 0.73
PCBP2-212ENST00000548190 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
PCBP2-212ENST00000548190 SHROOM2Q13796 1616 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms